mlx (mlx,LOC107721525,LOC107601295,LOC107720011,LOC107590371,LOC107654516,LOC107688133,LOC106601136)


Basic Information

Item Value
gene id mlx
gene name mlx,LOC107721525,LOC107601295,LOC107720011,LOC107590371,LOC107654516,LOC107688133,LOC106601136
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 4722417 ~ 4734902 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU243400
ACTCAGCCCGTGTTTACGCCAAGATGACGGAACAGAGCGCTTCGCCGGAGGATCCCTGGCATAAAACAGACGGCGCTTTCAGCGACAGCTTTGACCACAACTTCTTTGCAGAAAGTGCCCGTAAGGGATCAGTGGTCTCCAGAGCCAACAGTATCGGATCCACAAGCGCTTCTTCAGTACCAAATACAGATGATGAAGACAGCGACTACAAACATGAGACCAAGGACTCGTATAAAGACCGCAGaagacaagcacacacacaggctgagcAGAAACGCCGAGACGCTATTAAAaaAGGCTATGACGACTTGCAGTCCATCGTACCCACCTGCCAGCAGCAGTCTGAGTTCGCCATGGCTGCTCAGAAAATCAGCAAGGCCACGGTGCTGCAGAAAAccATAGATTACATTCAGTTTCTTcataaagagaagaagaagcaagAAGAGGAAGTGTCCATGCTGAGGAAGGAAGTGATGGCGCTGAAGATTATGAAAACG
>XM_034309939.1
CGCGCGCTACCTTAAGTGTAGAGTTCCAGCTGTATGCGCCCTACGTAGTGCGCTCTATATCCAATCAGAAGCTGTTTGGCACTCAGCCCGTGTTTACGCCAAGATGACGGAACAGAGCGCTTCGCCGGAGGATCCCTGGCATAAACAGACAGACGGCGCTTTCAGCGACAGCTTTGACCACAACTTCTTTGCAGAAAGTGCCCGTAAGGGATCAGTGGTCTCCAGAGCCAACAGTATCGGATCCACAAGCGCTTCTTCAGTACCAAATACAGATGATGAAGACAGCGACTACAAACATGAGACCAAGGACTCGTATAAAGACCGCAGaagacaagcacacacacaggctgagcAGAAACGCCGAGACGCTATTAagaaAGGCTATGACGACTTGCAGTCCATCGTACCCACCTGCCAGCAGCAGTCTGAGTTCGCCATGGCTGCTCAGAAAATCAGCAAGGCCACGGTGCTGCAGAAAAccATAGATTACATTCAGTTTCTTcataaagagaagaagaagcaagAAGAGGAAGTGTCCATGCTGAGGAAGGAAGTGATGGCGCTGAAGATTATGAAAACGAACTACGAGCAGATCGTGAAGGCTCACCAGAACAACCCTCAGCAGGGCAGCGAGCAGGTGTCCGATCAGGTCAAGTTCAGCGTGTTTCAGAACATTATGGACTCTCTGTTCCAGTCGTTCATCACCTCAGTGTCCGTCAGCAGCTTCCAGGAGCTCTCGGCCTGCGTCTTCAGCTGGCTCGAGGAGCACTGCAAACCGCAGACGCTGAGGGAGTTTGTGGTGGGTGTCCTGAGGCAGCTGAATGGCCAGCTGTATTAATGCGCTGGAGATGTCTCTCACACTCAGGATGTGGAGTTCACAGAGACTTCAGGTTGCTGTACTTCTACCAAAGgcacagattattattattattattattattattattattattattatagggcCTCAAGTGCCTGTCCCACAATGCAACATGATACACACTGTGCCACTTGGTTTTCTGCAGTGTAAGTAGTTAAGAGTGTTAGCCCAAGTGACAGGTGAATGTGGTGTGACTGGGGTTGaaatatacagaaatacagacaaTTTATGCCTCTGTATAAGGCAGAAGATATAGTGGTTAATAAGCTTGTTTATAATTAAAGGTTGCATTGTGTGACAAAATACAGCCACGTGGACTGGGGTGTGTTCCAGCTTTATACATGAGTGGGTGATTACAAGATGAATATTTAGCAATTCCTAAAAATTGGTCGACCTGATattatacacagtataatatTCATGCTAATGCTCAATGTACTACTTTTAGATCTGTCTTTATTCACTTCATCCAAATCACGGTATTACTGAATCTACTCTGAGCACAGGACTCAGTACTCAGGCTCAACGGCCCACCAGTGACCCCAAAGGCCTCTAAGTGAATGTCTTACCACTTTCATCTGTGACATACCCCTGTAGAATGATGCTGATGAACCCTAGATCACAGCCCCATTTCAGTACATATCCTCCTGATGACATCATATCTCAGGCATGATATGGACTCTATCGTATATCTGAGCCACTTTCAGTCCAAATTTAAACCACACAAACATTAGATATGGTACATTTAGTTTGGCCCCTTTTAGGCCCTGATTCTAAATGTCATGACAATTACACCACTGCTTAGTTTTGGACCACCACTGACCCACAGTCCACCTGCCATTCTCATAACTGACATTTTGTTCCTAAACTTAGCCATATTTGGCCCAGAGTTATCTGCTCTCTGAGGCTTTCTGGCAGTCCAGACTTTTGAACGCCTGACCTTCTGGTCTAAAGTGTAGTAACTTCAACTGATGAACTCCCACTGCCCCATTTACTTTATATCCTCTCATCCACTTATTCAGAGGGTGTGGCTACATACAAAAGATGTCTTTCCACTGAGATTACAGAACCTTTTGAGGAACTTAAGCAGTCTGGAACTTCCCAAATGGAAACTCCAGAGCCTTAGCGAATGGGATCTCTGGAACATTCCCGAATGGGAGGTCTGGAACCTCAGCGAATGGGATCTCTGGAACATTCCTGAATGGGATCTCTGGAACATTCCCGAATGGGAGCTCCAGAACCTCAGCGAATGGGATCTCTGGAACATTCCCAAATGGGAGCTCCAGAAATTTAGCGAATGGGAGCTCCGGAACCTCAGGGAATGGGATCTCTGGAACATTCCCGAATGGGATCTCTGGAACATTCCCGAATGGGAGCTCAGAAACTTAGCGAATGGGATCTCTGGAACATTCCCGAATGGGCGCTCCAGAAACTTAGCGAATGGGATCTCTGGAATCGTCCCGAATGGGGGGGTCCATAAGCTTCCTGCATGGGAGCTCTGGAACTTCTTTCCCACTCCAGGACATGTTCTCAGATGTTCATCATCTTTattgctaacactagctagctggATAACACAATctaacaggatttaaaaaaaaaaatccctggaTTACAGTGACAATGCTACAGCTACTCAGAAATGTTCTCACAGCGGTATCTCCTAGctttaaaaaatccacaaaatgCAGTATATAAGGCCAAGGCTGTTTAACCGGCTTTAATATAATTAAGCTGTTTTGATCTTGTTGTGCAGGAAGGAAAGAGGAAGTGCTGATCACGCCCACGCCATGCGACTCTGTATTGCTCGCTAACACACCCCAGTTCCATGTGTTGTTTATCAGCAGCTCTTTAAACCAATGCAATAATGTCAGTGTTTATTATgcatgtaaagtgtgtgtgtgtgtgtgctctcttgCTTACCTCTGAATCAGACTCTCTTATTATCAGACCAGTCTACGGGTGTGATCTCGAGAATGTGATCTACACTGAGTGAAATGCTGAACTATCACAcgtttgtgttttctctgttaCCTCATATTCAGATCCCAAAGCACAACTTTAATTACAGAACGGTGGTTCCAAGTGAGACCAAACGTAGCGAGTTGTACTAATCCaagatgtataaaaaaaaaaaaaaa
>XM_034309940.1
TACATACTGCCTATATACGCGCGCTACCTTAAGTGTAGAGTTCCAGCTGTATGCGCCCTACGTAGTGCGCTCTATATCCAATCAGAAGCTGTTTGGCACTCAGCCCGTGTTTACGCCAAGATGACGGAACAGAGCGCTTCGCCGGAGGATCCCTGGCATAAAACAGACGGCGCTTTCAGCGACAGCTTTGACCACAACTTCTTTGCAGAAAGTGCCCGTAAGGGATCAGTGGTCTCCAGAGCCAACAGTATCGGATCCACAAGCGCTTCTTCAGTACCAAATACAGATGATGAAGACAGCGACTACAAACATGAGACCAAGGACTCGTATAAAGACCGCAGaagacaagcacacacacaggctgagcAGAAACGCCGAGACGCTATTAAAaaAGGCTATGACGACTTGCAGTCCATCGTACCCACCTGCCAGCAGCAGTCTGAGTTCGCCATGGCTGCTCAGAAAATCAGCAAGGCCACGGTGCTGCAGAAAAccATAGATTACATTCAGTTTCTTcataaagagaagaagaagcaagAAGAGGAAGTGTCCATGCTGAGGAAGGAAGTGATGGCGCTGAAGATTATGAAAACGAACTACGAGCAGATCGTGAAGGCTCACCAGAACAACCCTCAGCAGGGCAGCGAGCAGGTGTCCGATCAGGTCAAGTTCAGCGTGTTTCAGAACATTATGGACTCTCTGTTCCAGTCGTTCATCACCTCAGTGTCCGTCAGCAGCTTCCAGGAGCTCTCGGCCTGCGTCTTCAGCTGGCTCGAGGAGCACTGCAAACCGCAGACGCTGAGGGAGTTTGTGGTGGGTGTCCTGAGGCAGCTGAATGGCCAGCTGTATTAATGCGCTGGAGATGTCTCTCACACTCAGGATGTGGAGTTCACAGAGACTTCAGGTTGCTGTACTTCTACCAAAGgcacagattattattattattattattattattattattattattatagggcCTCAAGTGCCTGTCCCACAATGCAACATGATACACACTGTGCCACTTGGTTTTCTGCAGTGTAAGTAGTTAAGAGTGTTAGCCCAAGTGACAGGTGAATGTGGTGTGACTGGGGTTGaaatatacagaaatacagacaaTTTATGCCTCTGTATAAGGCAGAAGATATAGTGGTTAATAAGCTTGTTTATAATTAAAGGTTGCATTGTGTGACAAAATACAGCCACGTGGACTGGGGTGTGTTCCAGCTTTATACATGAGTGGGTGATTACAAGATGAATATTTAGCAATTCCTAAAAATTGGTCGACCTGATattatacacagtataatatTCATGCTAATGCTCAATGTACTACTTTTAGATCTGTCTTTATTCACTTCATCCAAATCACGGTATTACTGAATCTACTCTGAGCACAGGACTCAGTACTCAGGCTCAACGGCCCACCAGTGACCCCAAAGGCCTCTAAGTGAATGTCTTACCACTTTCATCTGTGACATACCCCTGTAGAATGATGCTGATGAACCCTAGATCACAGCCCCATTTCAGTACATATCCTCCTGATGACATCATATCTCAGGCATGATATGGACTCTATCGTATATCTGAGCCACTTTCAGTCCAAATTTAAACCACACAAACATTAGATATGGTACATTTAGTTTGGCCCCTTTTAGGCCCTGATTCTAAATGTCATGACAATTACACCACTGCTTAGTTTTGGACCACCACTGACCCACAGTCCACCTGCCATTCTCATAACTGACATTTTGTTCCTAAACTTAGCCATATTTGGCCCAGAGTTATCTGCTCTCTGAGGCTTTCTGGCAGTCCAGACTTTTGAACGCCTGACCTTCTGGTCTAAAGTGTAGTAACTTCAACTGATGAACTCCCACTGCCCCATTTACTTTATATCCTCTCATCCACTTATTCAGAGGGTGTGGCTACATACAAAAGATGTCTTTCCACTGAGATTACAGAACCTTTTGAGGAACTTAAGCAGTCTGGAACTTCCCAAATGGAAACTCCAGAGCCTTAGCGAATGGGATCTCTGGAACATTCCCGAATGGGAGGTCTGGAACCTCAGCGAATGGGATCTCTGGAACATTCCTGAATGGGATCTCTGGAACATTCCCGAATGGGAGCTCCAGAACCTCAGCGAATGGGATCTCTGGAACATTCCCAAATGGGAGCTCCAGAAATTTAGCGAATGGGAGCTCCGGAACCTCAGGGAATGGGATCTCTGGAACATTCCCGAATGGGATCTCTGGAACATTCCCGAATGGGAGCTCAGAAACTTAGCGAATGGGATCTCTGGAACATTCCCGAATGGGCGCTCCAGAAACTTAGCGAATGGGATCTCTGGAATCGTCCCGAATGGGGGGGTCCATAAGCTTCCTGCATGGGAGCTCTGGAACTTCTTTCCCACTCCAGGACATGTTCTCAGATGTTCATCATCTTTattgctaacactagctagctggATAACACAATctaacaggatttaaaaaaaaaaatccctggaTTACAGTGACAATGCTACAGCTACTCAGAAATGTTCTCACAGCGGTATCTCCTAGctttaaaaaatccacaaaatgCAGTATATAAGGCCAAGGCTGTTTAACCGGCTTTAATATAATTAAGCTGTTTTGATCTTGTTGTGCAGGAAGGAAAGAGGAAGTGCTGATCACGCCCACGCCATGCGACTCTGTATTGCTCGCTAACACACCCCAGTTCCATGTGTTGTTTATCAGCAGCTCTTTAAACCAATGCAATAATGTCAGTGTTTATTATgcatgtaaagtgtgtgtgtgtgtgtgctctcttgCTTACCTCTGAATCAGACTCTCTTATTATCAGACCAGTCTACGGGTGTGATCTCGAGAATGTGATCTACACTGAGTGAAATGCTGAACTATCACAcgtttgtgttttctctgttaCCTCATATTCAGATCCCAAAGCACAACTTTAATTACAGAACGGTGGTTCCAAGTGAGACCAAACGTAGCGAGTTGTACTAATCCaagatgtataaaaaaaaaaaaaaa
>XR_004579368.1
ACGCGCGCTACCTTAAGTGTAGAGTTCCAGCTGTATGCGCCCTACGTAGTGCGCTCTATATCCAATCAGAAGCTGTTTGGCACTCAGCCCGTGTTTACGCCAAGATGACGGAACAGAGCGCTTCGCCGGAGGATCCCTGGCATAAACAGACAGACGGCGCTTTCAGCGACAGCTTTGACCACAACTTCTTTGCAGAAAGTGCCCGTAAGGGATCAGTGGTCTCCAGAGCCAACAGTATCGGATCCACAAGCGCTTCTTCAGTACCAAATACAGATGATGAAGACAGCGACTACAAACATGAGACCAAGGACTCGTATAAAGACCGCAGaagacaagcacacacacaggctgagcAGAAACGCCGAGACGCTATTAAAaaAGGCTATGACGACTTGCAGTCCATCGTACCCACCTGCCAGCAGCAGTCTGAGTTCGCCATGGCTGCTCAGAAAATCAGCAAGGCCACGGTGCTGCAGAAAAccATAGATTACATTCAGTTTCTTcataaagagaagaagaagcaagAAGAGGAAGTGTCCATGCTGAGGAAGGAAGTGATGGCGCTGAAGATTATGAAAACGAACTACGAGCAGATCGTGAAGGCTCACCAGAACAACCCTCAGCAGGGCAGCGAGCAGGTGTCCGATCAGGTCAAGTTCAGCGTGTTTCAGAACATTATGGACTCTCTGTTCCAGTCGTTCATCACCTCAGTGTCCGTCAGCAGCTTCCAGGAGCTCTCGGCCTGCGTCTTCAGCTGGCTCGAGGAGCACTGCAAACCGCAGACGCTGAGGGAGTTTGTGGTGGGTGTCCTGAGGCAGCTGAATGGCCAGCTGTATTAATGCGCTGGAGATGTCTCTCACACTCAGGATGTGGAGTTCACAGAGACTTCAGGTTGCTGTACTTCTACCAAAGgcacagattattattattattattattattattattattattattatagggcCTCAAGTGCCTGTCCCACAATGCAACATGATACACACTGTGCCACTTGGTTTTCTGCAGTGTAAGTAGTTAAGAGTGTTAGCCCAAGTGACAGGTGAATGTGGTGTGACTGGGGTTGaaatatacagaaatacagacaaTTTATGCCTCTGTATAAGGCAGAAGATATAGTGGTTAATAAGCTTGTTTATAATTAAAGGTTGCATTGTGTGACAAAATACAGCCACGTGGACTGGGGTGTGTTCCAGCTTTATACATGAGTGGGTGATTACAAGATGAATATTTAGCAATTCCTAAAAATTGGTCGACCTGATattatacacagtataatatTCATGCTAATGCTCAATGTACTACTTTTAGATCTGTCTTTATTCACTTCATCCAAATCACGGTATTACTGAATCTACTCTGAGCACAGGACTCAGTACTCAGGCTCAACGGCCCACCAGTGACCCCAAAGGCCTCTAAGTGAATGTCTTACCACTTTCATCTGTGACATACCCCTGTAGAATGATGCTGATGAACCCTAGATCACAGCCCCATTTCAGTACATATCCTCCTGATGACATCATATCTCAGGCATGATATGGACTCTATCGTATATCTGAGCCACTTTCAGTCCAAATTTAAACCACACAAACATTAGATATGGTACATTTAGTTTGGCCCCTTTTAGGCCCTGATTCTAAATGTCATGACAATTACACCACTGCTTAGTTTTGGACCACCACTGACCCACAGTCCACCTGCCATTCTCATAACTGACATTTTGTTCCTAAACTTAGCCATATTTGGCCCAGAGTTATCTGCTCTCTGAGGCTTTCTGGCAGTCCAGACTTTTGAACGCCTGACCTTCTGGTCTAAAGTGTAGTAACTTCAACTGATGAACTCCCACTGCCCCATTTACTTTATATCCTCTCATCCACTTATTCAGAGGGTGTGGCTACATACAAAAGATGTCTTTCCACTGAGATTACAGAACCTTTTGAGGAACTTAAGCAGTCTGGAACTTCCCAAATGGAAACTCCAGAGCCTTAGCGAATGGGATCTCTGGAACATTCCCGAATGGGAGCTCCGGAACCTCAGGGAATGGGATCTCTGGAACATTCCCGAATGGGATCTCTGGAACATTCCCGAATGGGAGCTCAGAAACTTAGCGAATGGGATCTCTGGAACATTCCCGAATGGGCGCTCCAGAAACTTAGCGAATGGGATCTCTGGAATCGTCCCGAATGGGGGGGTCCATAAGCTTCCTGCATGGGAGCTCTGGAACTTCTTTCCCACTCCAGGACATGTTCTCAGATGTTCATCATCTTTattgctaacactagctagctggATAACACAATctaacaggatttaaaaaaaaaaatccctggaTTACAGTGACAATGCTACAGCTACTCAGAAATGTTCTCACAGCGGTATCTCCTAGctttaaaaaatccacaaaatgCAGTATATAAGGCCAAGGCTGTTTAACCGGCTTTAATATAATTAAGCTGTTTTGATCTTGTTGTGCAGGAAGGAAAGAGGAAGTGCTGATCACGCCCACGCCATGCGACTCTGTATTGCTCGCTAACACACCCCAGTTCCATGTGTTGTTTATCAGCAGCTCTTTAAACCAATGCAATAATGTCAGTGTTTATTATgcatgtaaagtgtgtgtgtgtgtgtgctctcttgCTTACCTCTGAATCAGACTCTCTTATTATCAGACCAGTCTACGGGTGTGATCTCGAGAATGTGATCTACACTGAGTGAAATGCTGAACTATCACAcgtttgtgttttctctgttaCCTCATATTCAGATCCCAAAGCACAACTTTAATTACAGAACGGTGGTTCCAAGTGAGACCAAACGTAGCGAGTTGTACTAATCCaagatgtataaaaaaaaaaaaaaa

Function

symbol description
mlx Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human MLX (MAX dimerization protein MLX).

NR:

description
PREDICTED: max-like protein X

GO: NA

KEGG:

id description
K09113 MLX; MAX-like protein X

RNA

RNA id representative length rna type GC content exon number start site end site
TU243400 False 497 TUCP 0.49 6 4728094 4734805
XM_034309939.1 False 3018 mRNA 0.45 8 4722417 4734885
XM_034309940.1 True 3032 mRNA 0.45 8 4722417 4734902
XR_004579368.1 False 2875 misc_RNA 0.45 9 4722417 4734886

Neighbor

gene id symbol gene type direction distance location
tubg1 tubg1,LOC107721485 coding downstream 31920 4671755 ~ 4690497 (-)
cntnap1 cntnap1,LOC107721486,LOC107654512,LOC107720006,LOC107601289,LOC107590375,LOC107688128 coding downstream 131752 4563378 ~ 4590665 (-)
ramp2 ramp2 coding downstream 207780 4498898 ~ 4514637 (-)
LOC113527979 c1ql1,LOC102227234,LOC103393155,LOC107729572,LOC101070426,LOC104923905,LOC103367899 coding downstream 327888 4359299 ~ 4394529 (-)
ccdc43 ccdc43 coding downstream 488454 4227165 ~ 4233963 (-)
si:ch211-278a6.1 srcin1 coding upstream 38777 4773679 ~ 4935981 (-)
arf2a arf2a,arf2b,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding upstream 217194 4952096 ~ 4965626 (-)
gpatch8 gpatch8 coding upstream 280665 5015567 ~ 5048818 (-)
baxa bax coding upstream 346686 5081588 ~ 5087023 (-)
mpp3a mpp3,LOC107720025 coding upstream 922935 5657837 ~ 5691272 (-)
G205488 NA non-coding downstream 21454 4699200 ~ 4700963 (-)
G205484 NA non-coding downstream 161995 4553297 ~ 4560422 (-)
G205481 NA non-coding downstream 170549 4549561 ~ 4551868 (-)
G205293 NA non-coding downstream 207279 4514936 ~ 4515138 (-)
G205291 NA non-coding downstream 214705 4505198 ~ 4507712 (-)
G205541 fmnl1a,LOC108278868,LOC107720013,LOC107721528,LOC107654518,LOC107590427,LOC107688135 non-coding upstream 31835 4766737 ~ 4770844 (-)
G205558 NA non-coding upstream 93351 4828253 ~ 4828546 (-)
G205628 NA non-coding upstream 322008 5056910 ~ 5057116 (-)
LOC113528378 NA non-coding upstream 545828 5280730 ~ 5284905 (-)
G206164 NA non-coding upstream 896813 5631715 ~ 5631919 (-)
dcaf7 dcaf7,LOC100702343,LOC105030232 other downstream 604774 4092913 ~ 4117643 (-)
G205173 gfap,LOC103392664 other downstream 677842 4040481 ~ 4044575 (-)
kcnc3a kcnc3a,LOC108259249,LOC107729449,LOC108427388,LOC107693499,LOC107548332,LOC105891716 other downstream 856568 3768855 ~ 3865849 (-)
nde1 nde1 other downstream 1308650 3382831 ~ 3413767 (-)
si:dkey-283b1.7 LOC108276203,LOC107737768,LOC104929916,LOC106607185 other downstream 1644399 3073977 ~ 3078018 (-)
G205633 rps11,LOC102786880,LOC107674708 other upstream 354434 5089336 ~ 5091922 (-)
G206236 NA other upstream 1019865 5754767 ~ 5756733 (-)
G206282 NA other upstream 1106235 5841137 ~ 5841477 (-)
retsat LOC108257121,LOC108432054 other upstream 1205960 5940862 ~ 5950997 (-)
LOC113528542 NA other upstream 1218831 5953733 ~ 5961050 (-)

Expression


Co-expression Network