G206604


Basic Information

Item Value
gene id G206604
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 6126910 ~ 6194996 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU244626
ttttatttttatttatatattctgtatttaCATACACTAAAGTCAACATATATTCATCACAATTTAATAACACACCAGTTGATAAAATAAACCTAAATGATTTAGCATTTACAGACATTTGCTACTAACTTTCAGATTCGACCATGATCAAatgactgtatttatatttcctCAAGCAAAAAGTCACAATTACATTCTAAATTAAGCTGTAACTGAAGTGTCTCAGGAAACAATGTACACCATACGGCCTACATGCTACAACCCCTTAACATTCACAGGATTCCTTTATACcttgaaacatttaaaagaaaaatgacaacattaagagaaacactttcactagctcaaacacatgcacacgcacgcacgcacacacacacacacacaaacacacacacacacatattgcacATTGTCTTCAGTCTCTCAATGCACttcacactgaaataaaactgaTACCTCAAGTGGTAGATACCACAAAATAATGCAGCGTAAAACATTTATCCGAAATAATCACATCTGCTACCTCGTGCTTTTAAACCTGAAcctaaaaatggaaagaaaaaaaaaaaaaaagccagaacaAGAAACTGTGAACCTAAATGTGAAAGATGAATCAATAGAGATATAGTGTACTTTTCCTTAGACATAGTGTAATTTACCTGATTACTTATATTGGTTTATTAGGGGTGCTTATTCTAAACCAAAGGTTTGGATGAGGGCAAGAAGGGAGAGTACAAGGACTGAAAGGGATGACAAAGCTTCACAGCCTGAATTGTTAGATGAGGAAGACGAAGCTGTGCTGTTGCCTTCTGCACTGGGCGGGAAGGAACCCACTGTAGACTTCAAGAAAGTTGAGAAGCTGGATACCTTAGTGAAGACCTGGATATCTGTGGCACGAGATGCTGCATCTGACAAGGTTTTAGTGGAGCCACTAGTGCTGTTCGAACTGTTGGTAGAATTAGTGGTGCTGTTTGTGCTGTTGGTGGATCCAGTGGTGCTGTTCGAACTGTTGGTGGCGAGGGTTAAAACTGCAGCCTGGATCCATGACTGCCCTATCTTACACATTAGAGGACCTCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244626 True 1082 TUCP 0.38 2 6126910 6194996

Neighbor

gene id symbol gene type direction distance location
arhgap23a LOC108276663 coding downstream 21026 6026279 ~ 6105884 (-)
plcd3a plcd3,plcd3a,LOC108432051,LOC107581738,LOC107654535,LOC107591554 coding downstream 108923 5981200 ~ 6017987 (-)
nmt1a nmt1,LOC108432052,LOC102778525 coding downstream 148537 5962688 ~ 5978373 (-)
cdk21 LOC108274791 coding downstream 188479 5934040 ~ 5938431 (-)
svilc LOC108281065 coding downstream 195034 5897560 ~ 5931876 (-)
atp2a1 atp2a1,LOC108411044,LOC107755578,LOC107567734,LOC107690283,LOC107590562 coding upstream 28474 6223470 ~ 6238688 (-)
hsp70.3 LOC108259092 coding upstream 53786 6248782 ~ 6251486 (-)
aclya acly,aclya,LOC107729187,LOC107567706,LOC107755575 coding upstream 82220 6277216 ~ 6303481 (-)
cnp cnp coding upstream 112674 6307670 ~ 6312808 (-)
ttc25 ttc25 coding upstream 120303 6315299 ~ 6323127 (-)
LOC113528476 NA non-coding downstream 173406 5952798 ~ 5953504 (-)
G206210 NA non-coding downstream 399230 5721634 ~ 5727680 (-)
G206164 NA non-coding downstream 494991 5631715 ~ 5631919 (-)
LOC113528378 NA non-coding downstream 842005 5280730 ~ 5284905 (-)
G205628 NA non-coding downstream 1069794 5056910 ~ 5057116 (-)
G206628 NA non-coding upstream 8316 6203312 ~ 6204196 (-)
G206649 NA non-coding upstream 78820 6273816 ~ 6346363 (-)
G206924 NA non-coding upstream 629900 6824896 ~ 6825760 (-)
G206923 NA non-coding upstream 631372 6826368 ~ 6828146 (-)
G207057 NA non-coding upstream 907252 7102248 ~ 7102389 (-)
LOC113528542 NA other downstream 165860 5953733 ~ 5961050 (-)
retsat LOC108257121,LOC108432054 other downstream 175913 5940862 ~ 5950997 (-)
G206282 NA other downstream 285433 5841137 ~ 5841477 (-)
G206236 NA other downstream 370177 5754767 ~ 5756733 (-)
G205633 rps11,LOC102786880,LOC107674708 other downstream 1034988 5089336 ~ 5091922 (-)
stat5a sta5b,stat5,LOC108279147,LOC108444239,LOC105013349 other upstream 451062 6646058 ~ 6726165 (-)
G207231 spsb3 other upstream 1123607 7318603 ~ 7321962 (-)
natd1 natd1,LOC107661164,LOC107568532,LOC107689058 other upstream 1230721 7425717 ~ 7431112 (-)
crhr1 crhr1,LOC108261365,LOC107662410,LOC108413653 other upstream 1364771 7559767 ~ 7705492 (-)
slc4a1a LOC108279353 other upstream 2054889 8249885 ~ 8267638 (-)

Expression


Co-expression Network