G207565


Basic Information

Item Value
gene id G207565
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 8029206 ~ 8029449 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU245797
GTGGCTGAAGtcataagaaaatatagaaacacTAACACCACCCCTAACCCTAGTTTTCATAACTTATCACACAGATTGAGTTATGAGGATTGTTATACATTTGTTGTAAGAATGCGAGCATGTTGTATTATCATATACATTAGTAAAGTGGTACCTAACCATCTAGCTACCACATCACCAGCAGTGTATGCATACCTCAGATAAAGCTGCCTCGTAAACAATGTTAATtgatggtgattttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245797 True 244 lncRNA 0.36 1 8029206 8029449

Neighbor

gene id symbol gene type direction distance location
rprml LOC108261071 coding downstream 43384 7984469 ~ 7985822 (-)
LOC113528501 cq072 coding downstream 61216 7961774 ~ 7967990 (-)
phb phb,LOC107661032 coding downstream 548950 7473512 ~ 7480256 (-)
znf652 znf652,LOC108258819,LOC106607259 coding downstream 561371 7446563 ~ 7467835 (-)
phospho1 phospho1 coding downstream 592025 7431991 ~ 7437181 (-)
rnd2 rnd2,LOC108273890,LOC108413538,LOC107708553,LOC107552458,LOC107754744,LOC107567027,LOC103142158 coding upstream 100918 8130367 ~ 8155274 (-)
si:busm1-163l24.4 LOC108277007 coding upstream 172316 8201765 ~ 8203353 (-)
si:busm1-163l24.3 LOC108276929 coding upstream 174611 8204060 ~ 8209776 (-)
atxn7l3 atxn7l3,LOC108276986,LOC107571925,LOC107660606,LOC107566928 coding upstream 196848 8226297 ~ 8236622 (-)
ubtf ubtf,LOC102797579,LOC107660581 coding upstream 208701 8238150 ~ 8248789 (-)
G207540 NA non-coding downstream 81035 7943678 ~ 7948171 (-)
G207254 NA non-coding downstream 715551 7312082 ~ 7313655 (-)
G207205 cacnb1,LOC108413880 non-coding downstream 767093 7255625 ~ 7262113 (-)
G207227 NA non-coding downstream 788299 7240241 ~ 7240907 (-)
G207226 NA non-coding downstream 791325 7237673 ~ 7237881 (-)
G207571 NA non-coding upstream 3833 8033282 ~ 8036848 (-)
G207653 mrc2 non-coding upstream 81209 8110658 ~ 8114574 (-)
G207650 NA non-coding upstream 146909 8176358 ~ 8200778 (-)
G207732 NA non-coding upstream 324261 8353710 ~ 8358074 (-)
G207793 LOC107737118,LOC107558774 non-coding upstream 402549 8431998 ~ 8432261 (-)
crhr1 crhr1,LOC108261365,LOC107662410,LOC108413653 other downstream 323714 7559767 ~ 7705492 (-)
natd1 natd1,LOC107661164,LOC107568532,LOC107689058 other downstream 598094 7425717 ~ 7431112 (-)
G207231 spsb3 other downstream 707244 7318603 ~ 7321962 (-)
stat5a sta5b,stat5,LOC108279147,LOC108444239,LOC105013349 other downstream 1303041 6646058 ~ 6726165 (-)
G206604 NA other downstream 1834210 6126910 ~ 6194996 (-)
slc4a1a LOC108279353 other upstream 220436 8249885 ~ 8267638 (-)
selenow2a mien1,sepw2a,LOC107566883,LOC107755209 other upstream 250318 8279767 ~ 8289808 (-)
LOC113528661 NA other upstream 255025 8284474 ~ 8284592 (-)
ndufa4l ndufa4l,LOC108260900,LOC108413413,LOC107684646,LOC107590798,LOC103026352,LOC107582867 other upstream 678505 8707954 ~ 8713318 (-)
LOC113527952 LOC108260010,LOC108274064 other upstream 1083517 9112966 ~ 9142871 (-)

Expression


Co-expression Network