G208145


Basic Information

Item Value
gene id G208145
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 9007000 ~ 9007259 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU246517
AGGCTACAAATGTTGGGCCGAGTTACAGTGTTAGTCAGCTTATATCATGTTTATGGAAAAGGGGTGCTCCATCACACCAAATCTGATGAAAGGATTGTTTGTGAGCTGATGACTTGAATCAGGGGTACTGGAGCAGAGAACAAACTAAAATATATAGTGCTTAAGATTGTGACATCCTGTGATTCAACTATGAAATGCCACACAGTCAAAGACTCTCCTTATAAATGAATAACCAACCTGTCAAATAATTCTTCTGATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246517 True 260 lncRNA 0.38 1 9007000 9007259

Neighbor

gene id symbol gene type direction distance location
pitpnbl pipnb,LOC108410611,LOC103031125,LOC107552474,LOC107739385,LOC105028335,LOC106600642,LOC107754658 coding downstream 23623 8973287 ~ 8983377 (-)
sez6l2 sez6l2,LOC107660756 coding downstream 53681 8937563 ~ 8953319 (-)
kctd13 kctd13,LOC107739382,LOC107567055,LOC107552471,LOC107660789,LOC107755045 coding downstream 70460 8929611 ~ 8936540 (-)
hirip3 hirip3,LOC107689078,LOC107552470,LOC107739380 coding downstream 79089 8921509 ~ 8927911 (-)
taok2a taok2,LOC108278428,LOC107590788,LOC107710882 coding downstream 172264 8811408 ~ 8834736 (-)
lat LOC108257259 coding upstream 15287 9022546 ~ 9032032 (-)
spns1 spns1,LOC107754623,LOC107567150,LOC107660866,LOC107552478,LOC107739389,LOC107689070 coding upstream 25585 9032844 ~ 9044136 (-)
nfatc2ip NA coding upstream 38386 9045645 ~ 9049091 (-)
sgf29 sgf29 coding upstream 42514 9049773 ~ 9056443 (-)
si:dkey-93n13.2 LOC108274046 coding upstream 97042 9104301 ~ 9120154 (-)
G208099 NA non-coding downstream 48789 8957261 ~ 8958211 (-)
G208098 asphd1 non-coding downstream 50603 8955866 ~ 8956397 (-)
G208097 NA non-coding downstream 51345 8955442 ~ 8955655 (-)
G208063 NA non-coding downstream 92441 8871976 ~ 8914559 (-)
G208062 NA non-coding downstream 133498 8860563 ~ 8873502 (-)
G208151 NA non-coding upstream 17502 9024761 ~ 9024983 (-)
G208153 NA non-coding upstream 23266 9030525 ~ 9030978 (-)
G208158 nupr1,LOC108413333,LOC107660958,LOC107739393,LOC107567154,LOC100692788,LOC103393451 non-coding upstream 54321 9061580 ~ 9063507 (-)
G208189 NA non-coding upstream 95652 9102911 ~ 9103126 (-)
LOC117598997 NA non-coding upstream 434727 9441986 ~ 9446104 (-)
ndufa4l ndufa4l,LOC108260900,LOC108413413,LOC107684646,LOC107590798,LOC103026352,LOC107582867 other downstream 293682 8707954 ~ 8713318 (-)
selenow2a mien1,sepw2a,LOC107566883,LOC107755209 other downstream 717192 8279767 ~ 8289808 (-)
LOC113528661 NA other downstream 722408 8284474 ~ 8284592 (-)
slc4a1a LOC108279353 other downstream 739362 8249885 ~ 8267638 (-)
crhr1 crhr1,LOC108261365,LOC107662410,LOC108413653 other downstream 1301508 7559767 ~ 7705492 (-)
LOC113527952 LOC108260010,LOC108274064 other upstream 105707 9112966 ~ 9142871 (-)
dnal4a dnal4,LOC108261343,LOC108412416,LOC108436609,LOC106591471 other upstream 189237 9196496 ~ 9203640 (-)
prr15la LOC108273894,LOC108412372 other upstream 402545 9409804 ~ 9419584 (-)
copz2 copz2,LOC108260256,LOC108413159,LOC107740614,LOC107662379,LOC107710054,LOC107585036,LOC107687783,LOC105013247,LOC108246742,LOC106527321,LOC106912034 other upstream 457072 9464331 ~ 9474478 (-)
hoxb8a hoxb8a,LOC108278530,LOC108413053,LOC103044850,LOC107582957,LOC107662386,LOC107585089 other upstream 722592 9729851 ~ 9732566 (-)

Expression


Co-expression Network