Gene
RNA
| Item | Value |
|---|---|
| gene id | G212891 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 17900070 ~ 17900270 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| PREDICTED: membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU252161 | True | 201 | lncRNA | 0.44 | 1 | 17900070 | 17900270 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| crebbpb | LOC108279275,LOC107661648,LOC107553628 | coding | downstream | 622714 | 17180996 ~ 17277356 (-) |
| glis2b | LOC108276531 | coding | downstream | 861126 | 16974721 ~ 17038944 (-) |
| vasnb | LOC108276517 | coding | downstream | 968442 | 16909913 ~ 16931628 (-) |
| dnaja3a | dnaja3,LOC108431932 | coding | downstream | 1070986 | 16820240 ~ 16829084 (-) |
| LOC113527928 | LOC108259859 | coding | downstream | 1120417 | 16770298 ~ 16779653 (-) |
| foxj1a | LOC108274501,LOC108274674,LOC108263299 | coding | upstream | 30439 | 17930709 ~ 17934416 (-) |
| jmjd6 | jmjd6,LOC107748872,LOC107565873 | coding | upstream | 80743 | 17981013 ~ 17985888 (-) |
| LOC113528252 | dnaaf5 | coding | upstream | 201171 | 18101441 ~ 18161879 (-) |
| LOC117598994 | LOC101884462,LOC107081104,LOC101885893 | coding | upstream | 489612 | 18389882 ~ 18394978 (-) |
| LOC117598995 | LOC108191637 | coding | upstream | 676334 | 18576604 ~ 18577377 (-) |
| G212871 | NA | non-coding | downstream | 13828 | 17886012 ~ 17886242 (-) |
| G212856 | NA | non-coding | downstream | 20224 | 17879629 ~ 17879846 (-) |
| G212818 | NA | non-coding | downstream | 29418 | 17869886 ~ 17870652 (-) |
| G212843 | NA | non-coding | downstream | 103642 | 17796226 ~ 17796428 (-) |
| G212832 | NA | non-coding | downstream | 118416 | 17781346 ~ 17781654 (-) |
| G213028 | NA | non-coding | upstream | 141134 | 18041404 ~ 18043279 (-) |
| LOC117599003 | NA | non-coding | upstream | 170515 | 18070785 ~ 18076387 (-) |
| G213407 | NA | non-coding | upstream | 892165 | 18792435 ~ 18849147 (-) |
| G213549 | NA | non-coding | upstream | 1123488 | 19023758 ~ 19072985 (-) |
| G213716 | tnrc6a | non-coding | upstream | 1516914 | 19417184 ~ 19422415 (-) |
| tsen54 | tsen54 | other | downstream | 27489 | 17811613 ~ 17872581 (-) |
| G212750 | LOC100136012,LOC107575789 | other | downstream | 224786 | 17674827 ~ 17675284 (-) |
| LOC113528038 | caskin2 | other | downstream | 381543 | 17390186 ~ 17518527 (-) |
| G212700 | NA | other | downstream | 474169 | 17386211 ~ 17425901 (-) |
| LOC113528519 | NA | other | downstream | 580351 | 17292773 ~ 17319719 (-) |
| mettl23 | mettl23 | other | upstream | 150465 | 18050735 ~ 18054216 (-) |
| LOC117598999 | NA | other | upstream | 475414 | 18375684 ~ 18377363 (-) |
| si:dkey-204f11.64 | LOC108274053 | other | upstream | 923201 | 18823471 ~ 18827734 (-) |
| rbbp6 | rbbp6 | other | upstream | 1528947 | 19429217 ~ 19448559 (-) |
| lyar | lyar | other | upstream | 2040084 | 19940354 ~ 19984149 (-) |
