G213491


Basic Information

Item Value
gene id G213491
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 19144074 ~ 19145240 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU252829
CTGACTTTTATGCctctaatatttaacaaaactgCATCACAGCATGGCATTGCAACTAACATGATATCACAACATGGCACTGTAACTAACACTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAGCATGGCACTGTAACTAACATAGTGCCACTGCATGGAACTGTAACTAACACTGCATCACAGCGTGGTGCTGTAACTAACACTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAGCGTGGTGCTGTAACTAACGCTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAACGTGGTGCTGTAACTAACGCTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAACGTGGTGCTGTAACTAACGCTGCATCACAGCATGATGCTGTAACTAACACTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAACGTGGTGCTGTAACTAACGCTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAACGTGGTGCTGTAACTAACGCTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAACGTGGTGCTGTAACTAACGCTGCATCACAGCATGGCACTGTAACTAACACTGCATCACAACGTGGTGCTGTAACTAACGCTGCATCACAGCATGGCACTGTAACTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252829 True 720 TUCP 0.46 3 19144074 19145240

Neighbor

gene id symbol gene type direction distance location
suz12a LOC108278724,LOC108436970 coding upstream 46306 19082598 ~ 19097768 (+)
rab11fip4a rab11fip4,rab11fip4a,LOC108274243,LOC108436969,LOC107601264,LOC107654480,LOC107719982,LOC107688103 coding upstream 117548 18981873 ~ 19026526 (+)
coil NA coding upstream 163430 18971398 ~ 18980644 (+)
engase engase coding upstream 189319 18938571 ~ 18954755 (+)
rgs9a rgs9,rgs9a,LOC108278703,LOC108438013,LOC107590386,LOC107721500,LOC107719993 coding upstream 244093 18877674 ~ 18899981 (+)
dctn5 dctn5,LOC107579625,LOC107590401 coding downstream 195139 19340379 ~ 19348424 (+)
ndufab1b LOC108258021,LOC102794063 coding downstream 210616 19355856 ~ 19362164 (+)
nsfa nsf,LOC108260232 coding downstream 598755 19743995 ~ 19768874 (+)
msx1a msx1,msx1a,LOC107682425 coding downstream 663723 19808963 ~ 19810891 (+)
LOC113528548 stk32b coding downstream 681410 19826650 ~ 19842682 (+)
LOC117598754 NA non-coding upstream 61917 19079462 ~ 19082157 (+)
G213314 NA non-coding upstream 183334 18959030 ~ 18960740 (+)
G213244 NA non-coding upstream 245783 18846216 ~ 18898291 (+)
G213221 NA non-coding upstream 430448 18706417 ~ 18713626 (+)
G213191 NA non-coding upstream 578292 18517313 ~ 18565782 (+)
G213498 NA non-coding downstream 126091 19271331 ~ 19271589 (+)
G213499 NA non-coding downstream 126359 19271599 ~ 19271813 (+)
G213678 NA non-coding downstream 324622 19469862 ~ 19471356 (+)
G213792 NA non-coding downstream 485651 19630891 ~ 19631311 (+)
G213834 NA non-coding downstream 519464 19664704 ~ 19706850 (+)
smim22 NA other upstream 224132 18914726 ~ 18919942 (+)
zgc:163143 NA other upstream 709546 18425179 ~ 18434528 (+)
LOC113528171 NA other upstream 728727 18409841 ~ 18415347 (+)
LOC113528485 prkar1b,LOC107661853,LOC107653458 other upstream 801114 18183693 ~ 18342960 (+)
cenpx cenpx other upstream 1411068 17698673 ~ 17733006 (+)
gng13b NA other downstream 156114 19301354 ~ 19313218 (+)
LOC113528521 tnrc6a,LOC107719974,LOC107590441,LOC107721518,LOC107654452,LOC107688138 other downstream 227996 19373236 ~ 19455034 (+)
LOC113528458 LOC108275785 other downstream 727836 19873076 ~ 19911732 (+)
LOC113528304 evc2 other downstream 788584 19933824 ~ 19953286 (+)
G214015 lyar other downstream 833074 19978314 ~ 19981380 (+)

Expression


Co-expression Network