G214369


Basic Information

Item Value
gene id G214369
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 20471529 ~ 20471764 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU253833
CTCAACCCGTTTTGCGTCATTCTTCATCATTCTCAGACTAAAACACCGGAAAATAATCTTATAGaacactgtttttaaatgttaatagataatagcgtctgctaaatgaataaatgttactgtattaaTTTCACCCTTGTGGGCAAAGGTGCACTGCCCCAGGCACTAGCCACCCAGAGCACGTACTAATACTACAGTGGGATTTGAAGAGAAATTGATGAAGAATTACGCAAAAC

Function

GO: NA

KEGG:

id description
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU253833 True 236 lncRNA 0.38 1 20471529 20471764

Neighbor

gene id symbol gene type direction distance location
LOC113528524 LOC108258618 coding upstream 26583 20439441 ~ 20444946 (+)
leprotl1 leprotl1,LOC103152176 coding upstream 32661 20430641 ~ 20438868 (+)
drd5a drd5,LOC107701828 coding upstream 468849 20000958 ~ 20002680 (+)
zbtb49 zbtb49 coding upstream 474596 19963720 ~ 19996933 (+)
mcm7 mcm7,LOC107716516,LOC107744067,LOC107665623 coding upstream 570545 19888315 ~ 19900984 (+)
ankrd50 ankrd50 coding downstream 274944 20746708 ~ 20779232 (+)
dele1 kiaa0141 coding downstream 563496 21035260 ~ 21044307 (+)
LOC113528291 LOC108261075,LOC108434533 coding downstream 575497 21047261 ~ 21082014 (+)
tlr1 LOC108258270 coding downstream 709649 21181413 ~ 21184850 (+)
f8 LOC108279904 coding downstream 734695 21206459 ~ 21226848 (+)
LOC113528473 NA non-coding upstream 78309 20264198 ~ 20393220 (+)
G214144 NA non-coding upstream 257102 20213406 ~ 20214427 (+)
G214098 wdr1 non-coding upstream 289651 20071695 ~ 20181878 (+)
G214012 NA non-coding upstream 501373 19968008 ~ 19970156 (+)
G213984 NA non-coding upstream 559154 19912139 ~ 19912375 (+)
LOC117598998 NA non-coding downstream 373377 20845141 ~ 20852594 (+)
G214548 NA non-coding downstream 437064 20908828 ~ 20926678 (+)
G214694 NA non-coding downstream 673056 21144820 ~ 21158088 (+)
G214723 NA non-coding downstream 691136 21162900 ~ 21163304 (+)
G214731 NA non-coding downstream 713502 21185266 ~ 21186303 (+)
LOC113528520 znf518b other upstream 298177 20022509 ~ 20173352 (+)
G214015 lyar other upstream 490149 19978314 ~ 19981380 (+)
LOC113528304 evc2 other upstream 518243 19933824 ~ 19953286 (+)
LOC113528458 LOC108275785 other upstream 559797 19873076 ~ 19911732 (+)
LOC113528521 tnrc6a,LOC107719974,LOC107590441,LOC107721518,LOC107654452,LOC107688138 other upstream 1016495 19373236 ~ 19455034 (+)
nudt6 nudt6 other downstream 540010 21011774 ~ 21024087 (+)
hopx hopx other downstream 868652 21340416 ~ 21349086 (+)
LOC113540568 LOC108280981,LOC108280985,LOC108277574,LOC108277545,LOC108280967 other downstream 1010258 21482022 ~ 21513040 (+)
LOC113540569 LOC108280981,LOC108280985,LOC108277545,LOC108277574,LOC108280967 other downstream 1042809 21514573 ~ 21565376 (+)
G215015 LOC108275153 other downstream 1174316 21646080 ~ 21649152 (+)

Expression


Co-expression Network