Gene
RNA
| Item | Value |
|---|---|
| gene id | G214723 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21162900 ~ 21163304 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254221 | True | 247 | lncRNA | 0.49 | 2 | 21162900 | 21163304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113528291 | LOC108261075,LOC108434533 | coding | upstream | 80886 | 21047261 ~ 21082014 (+) |
| dele1 | kiaa0141 | coding | upstream | 118593 | 21035260 ~ 21044307 (+) |
| ankrd50 | ankrd50 | coding | upstream | 383668 | 20746708 ~ 20779232 (+) |
| LOC113528524 | LOC108258618 | coding | upstream | 717954 | 20439441 ~ 20444946 (+) |
| leprotl1 | leprotl1,LOC103152176 | coding | upstream | 724032 | 20430641 ~ 20438868 (+) |
| tlr1 | LOC108258270 | coding | downstream | 18109 | 21181413 ~ 21184850 (+) |
| f8 | LOC108279904 | coding | downstream | 43155 | 21206459 ~ 21226848 (+) |
| LOC113527948 | NA | coding | downstream | 125176 | 21288480 ~ 21293794 (+) |
| sec24b | sec24b,LOC108434542,LOC107596339,LOC107731363 | coding | downstream | 138339 | 21301643 ~ 21328754 (+) |
| LOC113527892 | NA | coding | downstream | 218476 | 21381780 ~ 21387087 (+) |
| G214694 | NA | non-coding | upstream | 4812 | 21144820 ~ 21158088 (+) |
| G214548 | NA | non-coding | upstream | 236222 | 20908828 ~ 20926678 (+) |
| LOC117598998 | NA | non-coding | upstream | 310306 | 20845141 ~ 20852594 (+) |
| G214369 | NA | non-coding | upstream | 691136 | 20471529 ~ 20471764 (+) |
| LOC113528473 | NA | non-coding | upstream | 769680 | 20264198 ~ 20393220 (+) |
| G214731 | NA | non-coding | downstream | 21962 | 21185266 ~ 21186303 (+) |
| G214753 | NA | non-coding | downstream | 35238 | 21198542 ~ 21244785 (+) |
| LOC117598756 | NA | non-coding | downstream | 193546 | 21356850 ~ 21359059 (+) |
| G214798 | NA | non-coding | downstream | 204720 | 21368024 ~ 21368228 (+) |
| G214800 | NA | non-coding | downstream | 243069 | 21406373 ~ 21464629 (+) |
| nudt6 | nudt6 | other | upstream | 138813 | 21011774 ~ 21024087 (+) |
| LOC113528520 | znf518b | other | upstream | 989548 | 20022509 ~ 20173352 (+) |
| G214015 | lyar | other | upstream | 1181520 | 19978314 ~ 19981380 (+) |
| LOC113528304 | evc2 | other | upstream | 1209614 | 19933824 ~ 19953286 (+) |
| LOC113528458 | LOC108275785 | other | upstream | 1251168 | 19873076 ~ 19911732 (+) |
| hopx | hopx | other | downstream | 177112 | 21340416 ~ 21349086 (+) |
| LOC113540568 | LOC108280981,LOC108280985,LOC108277574,LOC108277545,LOC108280967 | other | downstream | 318718 | 21482022 ~ 21513040 (+) |
| LOC113540569 | LOC108280981,LOC108280985,LOC108277545,LOC108277574,LOC108280967 | other | downstream | 351269 | 21514573 ~ 21565376 (+) |
| G215015 | LOC108275153 | other | downstream | 482776 | 21646080 ~ 21649152 (+) |
| G215022 | NA | other | downstream | 499780 | 21663084 ~ 22000809 (+) |
