Gene
RNA
| Item | Value |
|---|---|
| gene id | G214998 |
| gene name | LOC108275153 |
| gene type | unknown |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22039652 ~ 22064997 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254563 | True | 498 | TUCP | 0.45 | 3 | 22039652 | 22064997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117598775 | NA | coding | upstream | 370770 | 21668341 ~ 21668882 (+) |
| LOC117598774 | NA | coding | upstream | 373908 | 21664594 ~ 21665744 (+) |
| LOC117598848 | NA | coding | upstream | 376112 | 21663095 ~ 21663540 (+) |
| LOC117599000 | NA | coding | upstream | 378613 | 21660425 ~ 21661039 (+) |
| LOC117598992 | NA | coding | upstream | 380545 | 21658502 ~ 21659107 (+) |
| LOC113546929 | NA | coding | downstream | 472505 | 22537502 ~ 22548866 (+) |
| cckb | LOC108274239 | coding | downstream | 549862 | 22614859 ~ 22621980 (+) |
| rnf44 | rnf44 | coding | downstream | 668738 | 22733735 ~ 22754432 (+) |
| pdlim7 | pdlim7 | coding | downstream | 716369 | 22781366 ~ 22825233 (+) |
| LOC113546949 | LOC108277208 | coding | downstream | 1076717 | 23141714 ~ 23143760 (+) |
| G215035 | NA | non-coding | upstream | 18917 | 22015818 ~ 22020735 (+) |
| G215069 | NA | non-coding | upstream | 44587 | 21916419 ~ 21995065 (+) |
| G215075 | NA | non-coding | upstream | 73419 | 21923978 ~ 21966233 (+) |
| LOC117598970 | NA | non-coding | upstream | 126303 | 21912612 ~ 21913349 (+) |
| LOC117598790 | NA | non-coding | upstream | 127833 | 21911288 ~ 21911819 (+) |
| G215095 | NA | non-coding | downstream | 12493 | 22077490 ~ 22133009 (+) |
| G215107 | NA | non-coding | downstream | 68205 | 22133202 ~ 22401320 (+) |
| LOC117598974 | NA | non-coding | downstream | 72298 | 22137295 ~ 22139333 (+) |
| LOC117598906 | NA | non-coding | downstream | 75787 | 22140784 ~ 22141255 (+) |
| LOC117598961 | NA | non-coding | downstream | 77088 | 22142085 ~ 22142516 (+) |
| LOC117598942 | NA | other | upstream | 1741 | 22037335 ~ 22037911 (+) |
| LOC117598799 | NA | other | upstream | 2406 | 22035678 ~ 22037246 (+) |
| LOC117598798 | NA | other | upstream | 8023 | 22026714 ~ 22031629 (+) |
| G215073 | NA | other | upstream | 10357 | 21994585 ~ 22029295 (+) |
| LOC117598941 | NA | other | upstream | 19404 | 22019805 ~ 22020248 (+) |
| LOC117598890 | NA | other | downstream | 3958 | 22068955 ~ 22069825 (+) |
| LOC117598801 | NA | other | downstream | 8064 | 22073061 ~ 22073569 (+) |
| LOC117598965 | LOC108275153 | other | downstream | 10408 | 22075405 ~ 22087412 (+) |
| G215005 | LOC108275153 | other | downstream | 11249 | 22076246 ~ 22110810 (+) |
| LOC117598856 | LOC108275153 | other | downstream | 11286 | 22076283 ~ 22076828 (+) |
