Item | Value |
---|---|
gene id | G215022 |
gene name | NA |
gene type | unknown |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047607.1 |
NCBI id | CM018553.1 |
chromosome length | 26458119 |
location | 21663084 ~ 22000809 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU254587 | True | 393 | TUCP | 0.46 | 3 | 21663084 | 22000809 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC117599000 | NA | coding | upstream | 2045 | 21660425 ~ 21661039 (+) |
LOC117598992 | NA | coding | upstream | 3977 | 21658502 ~ 21659107 (+) |
LOC117598748 | NA | coding | upstream | 15281 | 21647236 ~ 21647803 (+) |
LOC117598747 | NA | coding | upstream | 16461 | 21645852 ~ 21646623 (+) |
rest | rest | coding | upstream | 31178 | 21620631 ~ 21631906 (+) |
LOC113546929 | NA | coding | downstream | 536693 | 22537502 ~ 22548866 (+) |
cckb | LOC108274239 | coding | downstream | 614050 | 22614859 ~ 22621980 (+) |
rnf44 | rnf44 | coding | downstream | 732926 | 22733735 ~ 22754432 (+) |
pdlim7 | pdlim7 | coding | downstream | 780557 | 22781366 ~ 22825233 (+) |
LOC113546949 | LOC108277208 | coding | downstream | 1140905 | 23141714 ~ 23143760 (+) |
G215042 | NA | non-coding | upstream | 6249 | 21656261 ~ 21656835 (+) |
G214829 | NA | non-coding | upstream | 28010 | 21634851 ~ 21635074 (+) |
G214825 | NA | non-coding | upstream | 45790 | 21617095 ~ 21617294 (+) |
G214747 | LOC108280967 | non-coding | upstream | 106683 | 21551549 ~ 21556401 (+) |
LOC117598827 | LOC108280967,LOC108277545,LOC108277574 | non-coding | upstream | 157298 | 21502137 ~ 21505786 (+) |
G215035 | NA | non-coding | downstream | 15009 | 22015818 ~ 22020735 (+) |
G215093 | NA | non-coding | downstream | 57535 | 22058344 ~ 22059756 (+) |
G215095 | NA | non-coding | downstream | 76681 | 22077490 ~ 22133009 (+) |
G215107 | NA | non-coding | downstream | 132393 | 22133202 ~ 22401320 (+) |
LOC117598974 | NA | non-coding | downstream | 136486 | 22137295 ~ 22139333 (+) |
G215015 | LOC108275153 | other | upstream | 13932 | 21646080 ~ 21649152 (+) |
LOC113540569 | LOC108280981,LOC108280985,LOC108277545,LOC108277574,LOC108280967 | other | upstream | 97708 | 21514573 ~ 21565376 (+) |
LOC113540568 | LOC108280981,LOC108280985,LOC108277574,LOC108277545,LOC108280967 | other | upstream | 150044 | 21482022 ~ 21513040 (+) |
hopx | hopx | other | upstream | 313998 | 21340416 ~ 21349086 (+) |
nudt6 | nudt6 | other | upstream | 638997 | 21011774 ~ 21024087 (+) |
LOC117598796 | NA | other | downstream | 2617 | 22003426 ~ 22003947 (+) |
LOC117598797 | NA | other | downstream | 4143 | 22004952 ~ 22005583 (+) |
G215085 | NA | other | downstream | 4257 | 22005066 ~ 22063878 (+) |
LOC117598887 | NA | other | downstream | 7681 | 22008490 ~ 22009299 (+) |
LOC117598878 | NA | other | downstream | 13294 | 22014103 ~ 22014607 (+) |