G215022



Basic Information


Item Value
gene id G215022
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 21663084 ~ 22000809 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU254587
ctacaacacacaccatgatctctacatccctactgctgctgctgctggcagccgtacactgtgttcactgtgttgagctgatccagaccggatccacagtattaacccctggtcagtcaatgactctgacctgtaAAGTGTCTGGATATTCATTAACAAGTACCTACTGTACAAACTGGatacgacaacctgcaggaaaaactCTAGAGTGGATCGGAAATATATGTTATGATGGTAACACTTACtacagtgagaaactgaaaagcaggtttcaggtttccagagacacgtccagcagcacagtaacattaacagggcagaagatgcagactgaagacacagctgtgtattactgcgctcgtgaaccacagtgagacagatcaacaacatccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254587 True 393 TUCP 0.46 3 21663084 22000809

Neighbor


gene id symbol gene type direction distance location
LOC117599000 NA coding upstream 2045 21660425 ~ 21661039 (+)
LOC117598992 NA coding upstream 3977 21658502 ~ 21659107 (+)
LOC117598748 NA coding upstream 15281 21647236 ~ 21647803 (+)
LOC117598747 NA coding upstream 16461 21645852 ~ 21646623 (+)
rest rest coding upstream 31178 21620631 ~ 21631906 (+)
LOC113546929 NA coding downstream 536693 22537502 ~ 22548866 (+)
cckb LOC108274239 coding downstream 614050 22614859 ~ 22621980 (+)
rnf44 rnf44 coding downstream 732926 22733735 ~ 22754432 (+)
pdlim7 pdlim7 coding downstream 780557 22781366 ~ 22825233 (+)
LOC113546949 LOC108277208 coding downstream 1140905 23141714 ~ 23143760 (+)
G215042 NA non-coding upstream 6249 21656261 ~ 21656835 (+)
G214829 NA non-coding upstream 28010 21634851 ~ 21635074 (+)
G214825 NA non-coding upstream 45790 21617095 ~ 21617294 (+)
G214747 LOC108280967 non-coding upstream 106683 21551549 ~ 21556401 (+)
LOC117598827 LOC108280967,LOC108277545,LOC108277574 non-coding upstream 157298 21502137 ~ 21505786 (+)
G215035 NA non-coding downstream 15009 22015818 ~ 22020735 (+)
G215093 NA non-coding downstream 57535 22058344 ~ 22059756 (+)
G215095 NA non-coding downstream 76681 22077490 ~ 22133009 (+)
G215107 NA non-coding downstream 132393 22133202 ~ 22401320 (+)
LOC117598974 NA non-coding downstream 136486 22137295 ~ 22139333 (+)
G215015 LOC108275153 other upstream 13932 21646080 ~ 21649152 (+)
LOC113540569 LOC108280981,LOC108280985,LOC108277545,LOC108277574,LOC108280967 other upstream 97708 21514573 ~ 21565376 (+)
LOC113540568 LOC108280981,LOC108280985,LOC108277574,LOC108277545,LOC108280967 other upstream 150044 21482022 ~ 21513040 (+)
hopx hopx other upstream 313998 21340416 ~ 21349086 (+)
nudt6 nudt6 other upstream 638997 21011774 ~ 21024087 (+)
LOC117598796 NA other downstream 2617 22003426 ~ 22003947 (+)
LOC117598797 NA other downstream 4143 22004952 ~ 22005583 (+)
G215085 NA other downstream 4257 22005066 ~ 22063878 (+)
LOC117598887 NA other downstream 7681 22008490 ~ 22009299 (+)
LOC117598878 NA other downstream 13294 22014103 ~ 22014607 (+)

Expression



Co-expression Network