G215082


Basic Information

Item Value
gene id G215082
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 22044131 ~ 22044605 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU254669
TCTGTGATAGATAACACTCCCATACACTTTAAATCTGGGTGAAGCAGAACTCAGAGAAGGATGATTTTAggacattgtattttatttgtactaatttcatATTCTTATGGACAGTCCCTGACCTCCTCTGCTTCTGTGGTGAAGAGACCTGGAGAGTCAGTCACTCTGTCCTGTACTGTCTCCGGATTCTCAATGAGCAGCTACTACATGCACTGGATCCGTCAGAAACCAGGAAAAGGACTGGAGTGGATCGGATACATTTACAGTAGCACTGgattctctcagtctctgcagGGCCAGTTCTCCATCACTAAAGACACCAACAAATCATGCTGTACCTAGAAGTGAAGAGTCTGAAAGCTGAAGACAcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254669 True 372 TUCP 0.44 2 22044131 22044605

Neighbor

gene id symbol gene type direction distance location
LOC117598775 NA coding upstream 375249 21668341 ~ 21668882 (+)
LOC117598774 NA coding upstream 378387 21664594 ~ 21665744 (+)
LOC117598848 NA coding upstream 380591 21663095 ~ 21663540 (+)
LOC117599000 NA coding upstream 383092 21660425 ~ 21661039 (+)
LOC117598992 NA coding upstream 385024 21658502 ~ 21659107 (+)
LOC113546929 NA coding downstream 492897 22537502 ~ 22548866 (+)
cckb LOC108274239 coding downstream 570254 22614859 ~ 22621980 (+)
rnf44 rnf44 coding downstream 689130 22733735 ~ 22754432 (+)
pdlim7 pdlim7 coding downstream 736761 22781366 ~ 22825233 (+)
LOC113546949 LOC108277208 coding downstream 1097109 23141714 ~ 23143760 (+)
G215035 NA non-coding upstream 23396 22015818 ~ 22020735 (+)
G215069 NA non-coding upstream 49066 21916419 ~ 21995065 (+)
G215075 NA non-coding upstream 77898 21923978 ~ 21966233 (+)
LOC117598970 NA non-coding upstream 130782 21912612 ~ 21913349 (+)
LOC117598790 NA non-coding upstream 132312 21911288 ~ 21911819 (+)
G215093 NA non-coding downstream 13739 22058344 ~ 22059756 (+)
G215095 NA non-coding downstream 32885 22077490 ~ 22133009 (+)
G215107 NA non-coding downstream 88597 22133202 ~ 22401320 (+)
LOC117598974 NA non-coding downstream 92690 22137295 ~ 22139333 (+)
LOC117598906 NA non-coding downstream 96179 22140784 ~ 22141255 (+)
LOC117598857 NA other upstream 1117 22042448 ~ 22043014 (+)
LOC117598925 NA other upstream 3881 22039806 ~ 22040250 (+)
LOC117598942 NA other upstream 6220 22037335 ~ 22037911 (+)
LOC117598799 NA other upstream 6885 22035678 ~ 22037246 (+)
LOC117598798 NA other upstream 12502 22026714 ~ 22031629 (+)
G215040 LOC108275153 other downstream 1867 22046472 ~ 22076818 (+)
LOC117598960 NA other downstream 1924 22046529 ~ 22046978 (+)
LOC117598800 NA other downstream 4400 22049005 ~ 22050596 (+)
LOC117598951 NA other downstream 6083 22050688 ~ 22051217 (+)
G215014 NA other downstream 9269 22053874 ~ 22073497 (+)

Expression


Co-expression Network