G215095


Basic Information

Item Value
gene id G215095
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 22077490 ~ 22133009 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU254689
tgggtaattttttttcctcagtgtggTCTGATTAGAGAACTGACGACATACCTTGTTTTAAGTTTATGTTTAAAGGTATTTTACGAATATCCATATTATTCAAGGACACACTGCTGTCTTAAAGCAACATAACTCCTTTGTGTAGCTGCGTGAAAAATGcttgtatgtataaaaaaagatCCACCACATTTACACGTGGAAATAAGCACTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254689 True 214 lncRNA 0.35 2 22077490 22133009

Neighbor

gene id symbol gene type direction distance location
LOC117598775 NA coding upstream 408608 21668341 ~ 21668882 (+)
LOC117598774 NA coding upstream 411746 21664594 ~ 21665744 (+)
LOC117598848 NA coding upstream 413950 21663095 ~ 21663540 (+)
LOC117599000 NA coding upstream 416451 21660425 ~ 21661039 (+)
LOC117598992 NA coding upstream 418383 21658502 ~ 21659107 (+)
LOC113546929 NA coding downstream 404493 22537502 ~ 22548866 (+)
cckb LOC108274239 coding downstream 481850 22614859 ~ 22621980 (+)
rnf44 rnf44 coding downstream 600726 22733735 ~ 22754432 (+)
pdlim7 pdlim7 coding downstream 648357 22781366 ~ 22825233 (+)
LOC113546949 LOC108277208 coding downstream 1008705 23141714 ~ 23143760 (+)
G215093 NA non-coding upstream 17734 22058344 ~ 22059756 (+)
G215035 NA non-coding upstream 56755 22015818 ~ 22020735 (+)
G215069 NA non-coding upstream 82425 21916419 ~ 21995065 (+)
G215075 NA non-coding upstream 111257 21923978 ~ 21966233 (+)
LOC117598970 NA non-coding upstream 164141 21912612 ~ 21913349 (+)
G215107 NA non-coding downstream 193 22133202 ~ 22401320 (+)
LOC117598974 NA non-coding downstream 4286 22137295 ~ 22139333 (+)
LOC117598906 NA non-coding downstream 7775 22140784 ~ 22141255 (+)
LOC117598961 NA non-coding downstream 9076 22142085 ~ 22142516 (+)
LOC113546937 NA non-coding downstream 11941 22144950 ~ 22145717 (+)
LOC117598856 LOC108275153 other upstream 662 22076283 ~ 22076828 (+)
G215040 LOC108275153 other upstream 672 22046472 ~ 22076818 (+)
LOC117598801 NA other upstream 3921 22073061 ~ 22073569 (+)
G215014 NA other upstream 3993 22053874 ~ 22073497 (+)
LOC117598890 NA other upstream 7665 22068955 ~ 22069825 (+)
G215012 LOC108275153 other downstream 8989 22141998 ~ 22183982 (+)
G215027 NA other downstream 33833 22166842 ~ 22203806 (+)
G215036 LOC108275153 other downstream 43458 22176467 ~ 22176921 (+)
LOC117598950 NA other downstream 61742 22194751 ~ 22195274 (+)
LOC117598809 NA other downstream 64079 22197088 ~ 22197594 (+)

Expression


Co-expression Network