hsd17b14 (hsd17b14,dhb14,LOC106606926)


Basic Information

Item Value
gene id hsd17b14
gene name hsd17b14,dhb14,LOC106606926
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 2084552 ~ 2091453 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916139.2
GTATGCATTTCGTTTCAGTTCCTAACAGCAGTTGTGTGGAAATGAGCTGCAGGAACATGGCGAGTGCACAGAGATACCAAGACAAGGTGGTGATTGTGACTGGAGGTTCCAAGGGTATCGGCAGAGGCATCGTTAAAGTCTTCGTGCAGAATGGGGCTAAAGTTGTTTTCTGCGCCAGAGGAGCTGAAGCAGGTAAACATGTGGAGGAGGAGCTCAATAAAGCGGCGGGTGTGTGTCTCTTCGTGTCTTGTGACATCTCTAAAGAAGAGGACATTAAGAGGCTGATCACCACAACCGTCGAGCGCTTCGGACAAATCGACTGTCTGGTGAATAACGCAGGCTGGCATCCTCCTCATAAACCCACAGACGACACCAGCGCAGAGGAGTTTAGAGATTTACTCAACCTGAATCTGATCAGCTACTTCCTCGCATCCAAGTTTGCTCTTCCGTACTTGCGAAAAACACAAGGCAACATCATCAACGTCTCCAGCCTGGTGGCGTCTATCGGACAGAAACACGCCGCTCCGTACGTAGCCACCAAGGGGGCGATCATCTCTATGACCAAAGCCATGGCTGTAGACGAAAGTCGCTACAATGTGAGAGTTAACTGCTTTTCCCCTGGTAATGTGATGACGCCTCTGTGGGAGGAGCTCGCGGGCCACACAGCCGACGCAGCCGCCGCCATTAAAGAGGGAGAGAACGCACAGCTGCTGGGGCGGATGGGCACCGAGGAGGAAAGTGGACTCGTCGCTCTCTTCCTGGCCGCTGATGCCACCTTCTGCACCGGAATAGACCTGCTCCTGAGCGGAGGAGCCGAGCTCAACTACGGCTTCAAAAGTCAGAtcccttaaaaataaaaaaaattttaaaaacactaatgTTTACATCGTCTGAGCTGATCCGTCTGTTTCTGCAACTCCTCAAGGTTCCTATAAGAGCATTGGATGTATtgattgtttacttttttatgaTGATATTGTGATTATGTTCTCTCTTTAATCAGAACAGGAAGTAATACAGAGTTACTGATGTGTGATTGCGTTTTTAAATGACGTTTTAAAGCACTGGATGTTACACTAATGTTCTTTACTAACACGGTAAAATGTTCTTCCACATTCCTGATTCTCAGCAGAGTTTAGACTATATGCTTTTTCTGTTCACAACTGTGTCTGTTGCACCTTTTcattatttcagaaatgaaGACTTCGATTAAAcatgtggaaaataaatgaGCATGGTGA

Function

symbol description
hsd17b14 Predicted to enable oxidoreductase activity. Orthologous to human HSD17B14 (hydroxysteroid 17-beta dehydrogenase 14).

NR:

description
PREDICTED: 17-beta-hydroxysteroid dehydrogenase 14 isoform X1

GO:

id name namespace
GO:0006412 translation biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005840 ribosome cellular_component
GO:0016491 oxidoreductase activity molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916139.2 True 1241 mRNA 0.47 10 2084552 2091453

Neighbor

gene id symbol gene type direction distance location
slc1a9 slc1a9,LOC108278773,LOC108434930,LOC107551162,LOC107680867,LOC107729473 coding upstream 23482 2012233 ~ 2061070 (+)
nucb1 nucb1,LOC108434929,LOC107729549,LOC107687629,LOC107563981,LOC107732899 coding upstream 181366 1890285 ~ 1903186 (+)
tbc1d17 tbc1d17,LOC107551157,LOC107687627,LOC107729504,LOC107563983,LOC107680857 coding upstream 214382 1854742 ~ 1870170 (+)
zgc:195001 LOC108274956 coding upstream 245214 1828671 ~ 1839338 (+)
emc10 emc10 coding upstream 258484 1816311 ~ 1826068 (+)
bcat2 bcat2,LOC108278805,LOC108434932,LOC107680854,LOC107561362,LOC107687634,LOC105897681,LOC107729480 coding downstream 1106 2092559 ~ 2114069 (+)
grna NA coding downstream 39075 2130528 ~ 2174611 (+)
LOC117598829 NA coding downstream 64146 2155599 ~ 2155849 (+)
rpl27 rpl27,LOC107551168,LOC106601555 coding downstream 95912 2187365 ~ 2195026 (+)
slc25a39 LOC108276595,LOC108434938 coding downstream 107296 2198749 ~ 2212411 (+)
G203935 NA non-coding upstream 75946 2008401 ~ 2008606 (+)
G203913 NA non-coding upstream 97337 1919023 ~ 1987215 (+)
G203906 NA non-coding upstream 162073 1905839 ~ 1922479 (+)
G203898 NA non-coding upstream 212992 1856423 ~ 1871560 (+)
G203885 NA non-coding upstream 259259 1824978 ~ 1825293 (+)
G203955 NA non-coding downstream 62983 2154436 ~ 2159283 (+)
G203965 NA non-coding downstream 106660 2198113 ~ 2198333 (+)
G203973 NA non-coding downstream 133096 2224549 ~ 2227164 (+)
G203967 NA non-coding downstream 167029 2258482 ~ 2260374 (+)
G203996 NA non-coding downstream 297531 2388984 ~ 2392499 (+)
ppfia3 ppfia3,LOC107551161,LOC107687647,LOC107563979,LOC107732887,LOC107729434 other upstream 96637 1917205 ~ 1987915 (+)
ccndx LOC108280826 other upstream 195037 1883052 ~ 1889515 (+)
syt3 syt3,LOC107551154,LOC107563990,LOC107680842 other upstream 464578 1561524 ~ 1619974 (+)
kmt5c LOC108280634 other upstream 723092 1353329 ~ 1361460 (+)
paqr4a paqr4,LOC101165805,LOC105897660,LOC104930707,LOC108280840,LOC107658445,LOC106606885,LOC102784286 other upstream 847350 1220494 ~ 1237202 (+)
rundc1 rundc1 other downstream 86230 2177683 ~ 2186164 (+)
LOC113528221 LOC108276032,LOC108276106 other downstream 776315 2867768 ~ 2908043 (+)
pyya LOC108276154,LOC108434917 other downstream 912155 3003608 ~ 3012859 (+)
LOC113527909 NA other downstream 1101251 3192704 ~ 3200133 (+)
glyr1 glyr1,LOC107688117,LOC107590383,LOC107721499 other downstream 1442836 3534289 ~ 3661164 (+)

Expression


Co-expression Network