timm29 (c2h19orf52)


Basic Information

Item Value
gene id timm29
gene name c2h19orf52
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 18790181 ~ 18792959 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916191.2
CTGAAATAAATGGCACTTGTACCCTACGTAGCGCCCTGCCTGTTCACCAGATGGCAATTTGGCTCTTATCCCGCACGCGCGCTGTGGTTGAGACGCTAACATGGCTGCCTTGAGGAGATGGTGCTCCACTGCAGCTGCTGCTACCAGCAAGGGTACAAGATGGGAGAGACTGCTGAACAGTCGTGCAGGTATGTGGTGCCGCAGTCTTCTGAGTGACTATAAAGAAGCATGCCGTGAAATATTTGTTGGAGCATATGAGCGCCCTTTCAAAGCCAGTCTTTATGTGGCTTTAGTTGGAGGTACATACGCCTGTTACTACACCAATCCAGACGACACGTCCTTCCAGTCTAGAATACTAGAGACTTCCAACCAGCTTGCCCTCCTCTCTCCGTGGATTCGTAGCGGCACATCGGATGGGCATGTGCAGAGCTTGGCCAGGCTGCGCAACGAGGGCCGTTTGCGATACGTCAGCCTGGGCATTGTCTCGTTGGCCTACGTGGCAGACTACGACCCTGAGTCCAGCCTGTATGAGGCACGGTGCTCTGCGCTTTCCGTGCCCTGGGCACAGTTGCCTGAACGTGTGCTGGACATAGGGTTTGCTGGGCGCTGGTGGATTTTGGAAAATAAGATGGAGAGCTATGATATAAATGAGGAGGAGTTCAAGCATCTCCCACCTGCCCTGCTGGCCACAGCACCCCCTACAGCacagcagacagagagaaatgagagactGCACCAGGAGTCCTGGAAGGCACTGGTGATGGAGGGAGAAGAAGAGATGGACAGTATGCAGGAAGCTGGGGAGGTAACAGgggaaggaaaagagagaagtgcaaaacagaacatttaatATGGTGTATGTGTTGTGATAAAGAACAATTGCTGATTTAGACTTGTGGACATGTCATGTATGAGCAAATGAATTTGTGTGTATCAGCCTGGAAGGACATTTCTGAGCTCTTCTATTTATTGTGGCGCTGGAGCAACACATAAAACTTCCTATCACATATTACCACAGTGTCTTCTGAGAACATGAAACTTATAAATCATTGATAATTGCTTTCTGCTCTGCTTGTTTTAAGTGGCAAAATGATGAGTAACTAAATTCAGTTTATTAGATACACCTACCTTGTATCTTCACTcattgaatacatttttttaggAATACACTGACTGACTGTGGTAAGTCTATTGCTGTGCTCAGTTTGACAGCCCTCCCTCTACCCCATTCATCAAAGTACCACCACTGAGCAGGAATGATTTGGCTGGTGGCCTATTCTCAGCACTGACATTATAGTGAAGGGGTATTCAAATGagtatagattttatttcacatactCAGCTCAATTTGCTGAGATAGTTTGCCAAATCCTCATCTGGACTGGGATCTGCCAGTTGAttttgtgtgtaggtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgttggtacaAGTACATCATACACAGTGGTGTTGCTCGGATTTTTATACAGCTAAGAAAAGCCTAGCGGAAGATTAACACAAATTGTGAACAGAAACTTATAATGATGGATAAAGATGGAGCAACAAAATAGGTGTGTCTAATAAAATGACCAgtaagtgtaaatgtttgtttaaaaaccacaacaactgtgccacacacactgacaagccACTTCCATGCCACTGTCACTGCCATTACACAAACGAGATGGAGCAACAAAGTAGGTGTGTCTAATAAAATGACTAgtaagtgtaaa

Function

NR:

description
mitochondrial import inner membrane translocase subunit Tim29-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916191.2 True 1741 mRNA 0.46 2 18790181 18792959

Neighbor

gene id symbol gene type direction distance location
slc25a23b slc25a23b,LOC108274688,LOC107601238,LOC107698653,LOC108444036,LOC107724434,LOC107689624 coding downstream 33505 18735653 ~ 18756676 (-)
znf207a znf207,LOC108278632,LOC108444040 coding downstream 69840 18711080 ~ 18720341 (-)
LOC117598995 LOC108191637 coding downstream 212804 18576604 ~ 18577377 (-)
LOC117598994 LOC101884462,LOC107081104,LOC101885893 coding downstream 395203 18389882 ~ 18394978 (-)
LOC113528252 dnaaf5 coding downstream 628302 18101441 ~ 18161879 (-)
carm1 carm1,LOC107689626 coding upstream 9072 18802031 ~ 18818309 (-)
aldh3b1 aldh3b1,LOC108258475,LOC108444046,LOC107698763 coding upstream 43234 18836193 ~ 18843733 (-)
gna13b LOC108278714,LOC108438014,LOC107721501,LOC107719992,LOC107654495,LOC107590387,LOC107688114,LOC107601276 coding upstream 58497 18851456 ~ 18872146 (-)
cog1 cog1 coding upstream 109704 18902663 ~ 18915773 (-)
rogdi rogdi,LOC107719995,LOC105899978,LOC107688116 coding upstream 129177 18922136 ~ 18936509 (-)
LOC117599003 NA non-coding downstream 713794 18070785 ~ 18076387 (-)
G213028 NA non-coding downstream 746902 18041404 ~ 18043279 (-)
G212891 NA non-coding downstream 889911 17900070 ~ 17900270 (-)
G212871 NA non-coding downstream 903939 17886012 ~ 17886242 (-)
G212856 NA non-coding downstream 910335 17879629 ~ 17879846 (-)
G213549 NA non-coding upstream 230799 19023758 ~ 19072985 (-)
G213716 tnrc6a non-coding upstream 624225 19417184 ~ 19422415 (-)
G213879 NA non-coding upstream 870378 19663337 ~ 19663762 (-)
G214159 NA non-coding upstream 1227593 20020552 ~ 20056144 (-)
G214325 NA non-coding upstream 1643093 20436052 ~ 20438834 (-)
LOC117598999 NA other downstream 412818 18375684 ~ 18377363 (-)
mettl23 mettl23 other downstream 735965 18050735 ~ 18054216 (-)
tsen54 tsen54 other downstream 917600 17811613 ~ 17872581 (-)
G212750 LOC100136012,LOC107575789 other downstream 1114897 17674827 ~ 17675284 (-)
LOC113528038 caskin2 other downstream 1271654 17390186 ~ 17518527 (-)
si:dkey-204f11.64 LOC108274053 other upstream 30512 18823471 ~ 18827734 (-)
rbbp6 rbbp6 other upstream 636258 19429217 ~ 19448559 (-)
lyar lyar other upstream 1147395 19940354 ~ 19984149 (-)
slc2a9l2 slc2a9 other upstream 1246828 20039787 ~ 20138213 (-)
hs3st1 hs3st1 other upstream 1412380 20205339 ~ 20213629 (-)

Expression


Co-expression Network