stk19 (stk19)



Basic Information


Item Value
gene id stk19
gene name stk19
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 14974576 ~ 14979006 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>XM_026916192.2
GCTCTGAGTGCTCTGACAACCGCGAAAATATCAAAGAAGAAGTTAGTTTAGCAAACAACACAGGAAGGAGTTGTTAACTTCATGTTTGAGTTTGTcttttgacatttgacattgTCATTTATGTCTTCTTTTAgataaaatatgttatttttcaCAGACAGGAACTATGAACAGAAAAAGATCGCTCATTTCAGAAACGTTTCGTGTAAAGAAAAGGAGATTTGGAGCTGACAGTCTCGTCGGAAATCCAGAACATAACGATGGTCAAGAGGGACCTTCTGACGTCAAAGCCACCTTGCAGTACCTGATGACGCTTTTCCCAAGGAAGTTGTTTGACGACAGCCTTCCACCGATTGTCTACAAACACCAGCTGTACAGTTTACTCAGCGACAAAACGCTGGTGGACAAGCAGCTGAATGAGTTGAGGGACAAAGGAGAACTGCTCATGTTCCAGCTGGGCTTCGACACGGACACATTCGCCTTGGTGTTTACTGAAGACTACAGGGCCAAAGTTCTGGCAGAACAGAACGGAAAAGACACTCATGCAACGGTCGAGAAGTTTCTAGATAAAGTGCTGCCTAGTTGCTCAGGACTGAGTTTCAGCAAATGTCAAATGCTTAAGGAGTTTCTTTTCACGGATTCCGAGATAACGCAGCTTGTGAAGTCAGGAGTGTTGACAGTGAGAGATGCGGGAAGCTGGTGGCTTTCGATTCCAAACTCTGGTCGATTCACCAAATACTTCATTCAGGGACGCAAAGCTGTACTCGGCATGGTCAAGAAATCAAAATACAATGAAATCCTAAAGGCTGATTTGGAACAACGTCGTGCCAAATCGCAAGTCAAACTCGATATAAAGTACCACATTCATGACATAATTGGTGCAGAACTGGTAGAATGCATACAGACCACGTCTGGGACTTTATTACGATTTGTGGACACTTAATCTTCAGCTTACCAAAAGTAAATGAACTGAGAAGCTTGTGATATTTCCTTTGAGGCATCGCACAggaaaaagacattttgttaCTGAAGGGTGGCAGCGTAAGAAGTGTACACAACAGGGATAAAGAGGGTGAACTGCATCCAAACAGGTCTGCCTTTAATGTTACAGGACTACAAATCTGTGTAATAGCCTACCTCAGGTACATTCAACAAAATACTTAATTTGCTTCCAGTGagaagtgttactgtgtgttgCCTTCAATTCAGTGgcatttttgttgttaaaaagatggttgcacaatttttttttatttctgacctGTTGAAATAAATGACTCTTCTCTGTAA
>XM_034309966.1
TGCTCTGAGTGCTCTGACAACCGCGAAAATATCAAAGAAGAAGTTAGTTTAGCAAACAACACAGGAAGGAGTTGTTAACTTCATGTTTGAGTTTGTcttttgacatttgacattgTCATTTATGTCTTCTTTTAgataaaatatgttatttttcaCAGACAGGAAAGGGACCTTCTGACGTCAAAGCCACCTTGCAGTACCTGATGACGCTTTTCCCAAGGAAGTTGTTTGACGACAGCCTTCCACCGATTGTCTACAAACACCAGCTGTACAGTTTACTCAGCGACAAAACGCTGGTGGACAAGCAGCTGAATGAGTTGAGGGACAAAGGAGAACTGCTCATGTTCCAGCTGGGCTTCGACACGGACACATTCGCCTTGGTGTTTACTGAAGACTACAGGGCCAAAGTTCTGGCAGAACAGAACGGAAAAGACACTCATGCAACGGTCGAGAAGTTTCTAGATAAAGTGCTGCCTAGTTGCTCAGGACTGAGTTTCAGCAAATGTCAAATGCTTAAGGAGTTTCTTTTCACGGATTCCGAGATAACGCAGCTTGTGAAGTCAGGAGTGTTGACAGTGAGAGATGCGGGAAGCTGGTGGCTTTCGATTCCAAACTCTGGTCGATTCACCAAATACTTCATTCAGGGACGCAAAGCTGTACTCGGCATGGTCAAGAAATCAAAATACAATGAAATCCTAAAGGCTGATTTGGAACAACGTCGTGCCAAATCGCAAGTCAAACTCGATATAAAGTACCACATTCATGACATAATTGGTGCAGAACTGGTAGAATGCATACAGACCACGTCTGGGACTTTATTACGATTTGTGGACACTTAATCTTCAGCTTACCAAAAGTAAATGAACTGAGAAGCTTGTGATATTTCCTTTGAGGCATCGCACAggaaaaagacattttgttaCTGAAGGGTGGCAGCGTAAGAAGTGTACACAACAGGGATAAAGAGGGTGAACTGCATCCAAACAGGTCTGCCTTTAATGTTACAGGACTACAAATCTGTGTAATAGCCTACCTCAGGTACATTCAACAAAATACTTAATTTGCTTCCAGTGagaagtgttactgtgtgttgCCTTCAATTCAGTGgcatttttgttgttaaaaagatggttgcacaatttttttttatttctgacctGTTGAAATAAATGACTCTTCTCTGTAA

Function


symbol description
stk19 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in positive regulation of Ras protein signal transduction and protein phosphorylation. Orthologous to human STK19 (serine/threonine kinase 19).

NR:

description
PREDICTED: serine/threonine-protein kinase 19

GO: NA

KEGG:

id description
K08880 STK19; serine/threonine kinase 19

RNA


RNA id representative length rna type GC content exon number start site end site
XM_026916192.2 True 1290 mRNA 0.42 7 14974577 14979006
XM_034309966.1 False 1186 mRNA 0.42 6 14974576 14979006

Neighbor


gene id symbol gene type direction distance location
zgc:112148 tvp23b,LOC105899270,LOC108437154 coding upstream 33482 14935237 ~ 14941094 (+)
LOC113528525 LOC108260868 coding upstream 42570 14927553 ~ 14932006 (+)
ush1ga ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596,LOC107664446 coding upstream 53899 14912189 ~ 14920677 (+)
hid1a hid1,LOC107710705,LOC107698779 coding upstream 74844 14878966 ~ 14899732 (+)
cyth1a cyth1,cyth1a,LOC106920077,LOC108277039,LOC107552117,LOC103392816,LOC104925066 coding upstream 373569 14534573 ~ 14601007 (+)
cyth3b cyth3,LOC108258062,LOC108437157,LOC107556600,LOC101486233,LOC103143117,LOC107664323,LOC107571178 coding downstream 21864 15000870 ~ 15037047 (+)
cep112 cep112 coding downstream 229100 15208106 ~ 15342947 (+)
axin2 LOC108255292,LOC108437161 coding downstream 364251 15343257 ~ 15372183 (+)
tex2 LOC108278257,LOC108437163 coding downstream 458385 15437391 ~ 15469406 (+)
LOC113528209 ern1,LOC107555087 coding downstream 493860 15472866 ~ 15501425 (+)
G211287 NA non-coding upstream 74270 14899776 ~ 14900306 (+)
G211247 NA non-coding upstream 130014 14844422 ~ 14844562 (+)
LOC113527943 NA non-coding upstream 130204 14838290 ~ 14844372 (+)
G211208 NA non-coding upstream 259701 14714671 ~ 14714875 (+)
LOC113528421 NA non-coding upstream 330333 14643716 ~ 14644243 (+)
G211338 NA non-coding downstream 31136 15010142 ~ 15010651 (+)
LOC117598819 NA non-coding downstream 224516 15203522 ~ 15204658 (+)
G211540 NA non-coding downstream 490543 15469549 ~ 15471704 (+)
G211543 NA non-coding downstream 507531 15486537 ~ 15488982 (+)
G211838 NA non-coding downstream 726743 15705749 ~ 15706001 (+)
socs3a socs3 other upstream 352788 14619204 ~ 14621788 (+)
zgc:158403 zgc:158403,LOC108258290,LOC108441004,LOC107718630,LOC107553678,LOC107661656,LOC107695678 other upstream 1480634 13464085 ~ 13493942 (+)
znf653 znf653,LOC104961106,LOC107553636,LOC103393609 other upstream 1528890 13435381 ~ 13445686 (+)
ndufb10 ndufb10 other upstream 2600204 12367566 ~ 12374372 (+)
arhgap17b LOC108279379,LOC108432202 other upstream 2784506 12158703 ~ 12190070 (+)
LOC117598752 NA other downstream 9080 14988086 ~ 14991450 (+)
G211913 NA other downstream 939211 15918217 ~ 15968759 (+)
LOC113527983 sstr5,sstr2,LOC108260271,LOC103373483,LOC107083133,LOC104918336,LOC102291375 other downstream 1161324 16140330 ~ 16146326 (+)
srl srl,LOC108261333,LOC107695714,LOC107661647,LOC107718567,LOC107553668 other downstream 2108278 17087284 ~ 17113156 (+)
cenpx cenpx other downstream 2719667 17698673 ~ 17733006 (+)

Expression



Co-expression Network