baiap2l1b (LOC108276911,LOC108412765)


Basic Information

Item Value
gene id baiap2l1b
gene name LOC108276911,LOC108412765
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 10485735 ~ 10527286 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916269.2
GCCTGACGTCACGCGCTCTACCTAGCCTTACCTATGCTGACTCCGCCCCCTTCTCCTCACTCACACATGCGCGAGTTTGACAGCGCAGCTTTGAAACTGAATCGAAAACGCCCGGTTGTTCCTCCTTGTTCGTCGTTTTGGggattttttcctctttctttctgtagttTTAAGTGTGGTGTGTGGGGAAAATCGACTAGCTATGAGGACCGGTCTCTAacggagggttttttttttggtcgttGTTTCATTACTTGGGAGTATCGACAGGTTAGaaagtttttgtatttttgttacacGCGCGAACTCGCGAAGGACTGAAACATGTCGCGAGACCCAGACGAGGTgaataaactgactgaaagCACCTATAAGAATGTTATGGAACAGTTTAACCCGGGGCTGAAGAACCTTATCAACCTTGGAAAGAGCTACGAGAAAGCCGTCATGGCCATGACCCTGGCTGGAAAGATGTACTTTGAAGCTGTGGGTAAGATCGGGGAGAACGCTGCTGTATCTCCGGTCTCAAGAGAATTAGGAGTGGTGTTGACTGAGATCTCCGAAGCCCACAGGAAGGTCCTACTTGAGCTGGAAGAGAATTTCAGACGCTTCCATCGAGAGATTATTGCTGAGCTGGACAGGAAGACAGATATGGATGTGAAATACATGACGGCCACGTTTAAGAAGTATCAGATGGAGCACAAGATGAAGCAGGACTCTCTGGAGAGGTCTCAGGCTGACCTGAAAAAGCTGAGGAGGAAGAGCCAAGGAAAGAATGCGCTGAAGTATGAGAGCAAAGAGAATGAGTGTTTGGAGACCCTCACGCACCGCCAGATGGACATGCAGAAGTTTATTGCAGATGGCTGTAAAGAGGCTTTGCTTGAGGAGAAAAGGAGGTTCTGCTTCCTGGTGGACAAACATTGTACTTTCTCCTACCAGTTAGCAGCTTTCCATGAAAAGGCAAAGGATATTCTAACAGACCAGATACCTAACTGGCAAGATAAATGTACTGATATTACCAACGTTCCAGACAGTGTGATGTCAATGATAGAAGGTCTGCGCACCCCAGTGTCTATAACCCCTCAGGCCTCTCCAGCCGTAAAGCGCCACAGCAGGAACAATTCTGATGCAGTGATTCCACCTCCTGCACCCCCACTAAAGGCTCAAACAAGTCCATTAGCGAACATGTTCAACCAAGACACAGCAAAGCAAGAGACTGTGACTGATAATAGTAATGATGGGAGTCAAATGGTCAGGTCAATTTCGATGGCTACAGGGCTGAACAATATGAGCCGGAGGCCACGCGTCAGGACTATCTTCCCCCACAACTCTGGCAATAACAACACCCTGCTGAGCTTTGATGAGGGTGACTTCATCATCCTGCTCATCCCTGATGAGAAAGACGGCTGGCTTTATGGAGAATTGGAGAAGACCAAACAAAGGGGCTGGTTTCCATCATCCTACTGTCGTCCATATGTAGAACCTGTGGTAAATAACAGTGTTGTTGGGAATCCTCCGGCACGTAGTAAGAGTGTGGCCAACCTCACGCAGCAGGACCCCGAGGATGATATGCTGCTGCCTCCTCCTGACTACAGCGACATTGCCGTCAGGAGGAACTCAACCAAGTCCCTGATTCAGACACATGTGCCTTCCTCTGAAAACACGGTTTCTCAGCCAAATGGAATTTCAAAGCCGCCTTTTCTAGGGGGCGGGAACCCTTTTGCCACCGTGAAGCTGAGGCCCACAGTCACCAACGACAGATCGGCTCCTAGGATCTGATTATCACCACCCCTTAGCCATCAGCAGCTCTTTTCCCCCCAGCATCACCACCACTGCTGCGTGAATGCAGACCTTTCTTCTGCAAAGTACTACATTATACATGAGCTTTAGGCCATGTTGGACTAGATACCTTGGTGGCCTCATTGCACACAGGCAAACTACACATTTATCTTTGTACATTATAAAAGCcaatattcacatacacatttaaaaatcattcagatGTTTGTGCTGCCGTATAGGGTTTGTCCTGGACGATGAACAAGAGCGGCGCTAGATAGATCTGTTATAGAGTAAATATgcttataatatattttgtcCGGAGTTTTACCTGAGGCGTTGATGACTGCTTTTAATTTGCAAGAATAACACGCCTTCCCTGTGCTGAGATGGAGAGGAACCTAGgatgtttaattaattgttaaGAATTTTACATTGTCATGGGACAATGATGAATGTAAAAATGGGACCAAGGCACTGAATTTTCAGGTTATATAGTGTTGCAGATGTAATTATGCAGGATTACTTAAATTGTATCAGGTTATTTAAAATCTCGAACGTCATGGTACACTAGGATTAAACATATGCTTTAATTCCAAATGCTTGATAGTGTGTTTAGATTGTAAAGCTATGCTTCAACAGACCCATTCCCAAATACTATTTAAtacccttttttctttttctcagagAGGATACATTTACCTCTTTAATTTTATGATGTTGTcactgaaaattatttttcaatgtCCGTATCCAGTTCACAAGCAGCCTCACTTGTCTTCGAGAGTCACACTGATTAAACACACTTTAATTACATAGACAAATTGTACTTAAATTAATTTTGAAGCTTTAAGGTAGCCATTTATTCGTTTTATCAACACAGTTGTCTCTTTTCCAATGCCCTGTGAATCActgctgtataaaataaaaatgttttatttcttttatca

Function

NR:

description
PREDICTED: brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1

GO:

id name namespace
GO:0046847 filopodium assembly biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007165 signal transduction biological_process
GO:0017124 SH3 domain binding molecular_function
GO:0008093 cytoskeletal anchor activity molecular_function

KEGG:

id description
K20127 BAIAP2L1, IRTKS; BAI1-associated protein 2-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916269.2 True 2729 mRNA 0.44 14 10485735 10527286

Neighbor

gene id symbol gene type direction distance location
pvalb5 LOC108278987,LOC108412247 coding downstream 58507 10420040 ~ 10427228 (-)
LOC113527991 LOC108279005,LOC103031037,LOC108412819,LOC108273406,LOC107665844 coding downstream 67820 10415901 ~ 10417915 (-)
pvalb4 LOC100305042,LOC107724737,LOC108412813,LOC107665849,LOC107548706,LOC103030720 coding downstream 70967 10413005 ~ 10414768 (-)
pvalb8 prvu,pvalb8,LOC103030409,LOC108412252,LOC107691229,LOC107548708,LOC103141687,LOC103141679,LOC103469263 coding downstream 78655 10403780 ~ 10407080 (-)
trnac-gca_22 NA coding downstream 100615 10385049 ~ 10385120 (-)
nptx2a nptx2,LOC108275595,LOC107665931,LOC107724745,LOC107713953 coding upstream 19035 10546321 ~ 10557800 (-)
srebf1 srebf1,LOC107691218 coding upstream 320415 10847701 ~ 10869084 (-)
LOC113527942 tom1l2 coding upstream 344748 10872034 ~ 10898540 (-)
tbl3 tbl3 coding upstream 415952 10943238 ~ 10962840 (-)
rcvrna LOC108260894,LOC108412638,LOC107583783,LOC107725264,LOC107690016,LOC107555668,LOC107755173 coding upstream 482001 11009287 ~ 11011550 (-)
G208964 lmtk2 non-coding downstream 35195 10447736 ~ 10450540 (-)
G208951 NA non-coding downstream 143513 10341911 ~ 10342222 (-)
G208771 NA non-coding downstream 194850 10221710 ~ 10290885 (-)
G208758 NA non-coding downstream 298483 10187036 ~ 10187252 (-)
G208649 NA non-coding downstream 419379 10063977 ~ 10066356 (-)
G208998 NA non-coding upstream 106249 10633535 ~ 10634150 (-)
G209189 NA non-coding upstream 561727 11089013 ~ 11144984 (-)
LOC113528410 NA non-coding upstream 691373 11218659 ~ 11221378 (-)
G209529 NA non-coding upstream 861674 11388960 ~ 11389231 (-)
G209538 NA non-coding upstream 873436 11400722 ~ 11401423 (-)
tecpr1b LOC108276900 other downstream 15217 10450724 ~ 10470518 (-)
hoxb8a hoxb8a,LOC108278530,LOC108413053,LOC103044850,LOC107582957,LOC107662386,LOC107585089 other downstream 753169 9729851 ~ 9732566 (-)
copz2 copz2,LOC108260256,LOC108413159,LOC107740614,LOC107662379,LOC107710054,LOC107585036,LOC107687783,LOC105013247,LOC108246742,LOC106527321,LOC106912034 other downstream 1011257 9464331 ~ 9474478 (-)
prr15la LOC108273894,LOC108412372 other downstream 1066151 9409804 ~ 9419584 (-)
dnal4a dnal4,LOC108261343,LOC108412416,LOC108436609,LOC106591471 other downstream 1282095 9196496 ~ 9203640 (-)
hmox1a hmox1,LOC108432221 other upstream 1114871 11642157 ~ 11647997 (-)
zgc:162612 foxd1,LOC108278341,LOC107757501 other upstream 1172563 11699849 ~ 11701172 (-)
LOC113528332 hs3st6,LOC102795972 other upstream 1770490 12297776 ~ 12315498 (-)
msrb1a msrb1 other upstream 1806568 12333854 ~ 12339269 (-)
tom1 LOC108260160 other upstream 2019047 12546333 ~ 12559213 (-)

Expression


Co-expression Network