znf207a (znf207,LOC108278632,LOC108444040)


Basic Information

Item Value
gene id znf207a
gene name znf207,LOC108278632,LOC108444040
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 18711080 ~ 18720341 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916637.2
GACAAATGACAGTGAAAAGCGGACTAGTGGCAACTCTATCACTCCgttgttttcttgtttctttctctcctatTCTCACACTCCGCTCCAGTAGGGGGCGATATGGTAGCGCTACAGCTTCAAACTTCCCGTTTAACACTTTCGCACGTTTCCGTCTGCGCCATTTTCTTCTGCCAAATGTTCGGTTCGTGCACCACATCTTGGTGATTCACAAACTAATTGTACACTACTCTACTAAAACATgggaaggaaaaagaagaagcagatGAAGCCATGGTGTTGGTATTGTAATAGGGATTTTGATGACGAAAAGATTCTTATTCAGCACCAGAAAGCCAAACACTTTAAGTGTCACATATGTCATAAAAAGCTATACACTGGTCCGGGCCTGGCCATCCACTGTATGCAGGTTCACAAAGAAACAATTGATGGTGTTCCCAATGCAATACCTGGAAGAACAGACATTGAACTGGAAATTTATGGGATGGAGGGTATTCCAGAGAAAGATATGGAAGAAAGGAGACGGGTACTCGAGCAGAAAACACAGGaaaaccagaaaaagaaacagaaccaAGATGactcagatgaggatgatgatgatgaagaggcaGGACCCTCATTCCAGCAGGCAGCAGCCCAGCCTCCGGCCGCTTACACTCCTATGACACAGCCTGGAATGGCGCCTGTGCCCACACCAGGGATGCCACCTGGGAGCTACTCAGGAATGCCACCAATGATGCCTGCAGTCCCCCCCATGATGCCAGGGATGCCCCCAGTCATGCCAGGAATGCCACCTGGcatgATGCCCATGGGTGGGATGATGCCACCTGGACCAGGAATGCCTCCGATGATGCCAGGCATGCCACCAGGCATGCCCCCTCCTATGGGTCATCGTCCAGGTATGAACCACATGCCACAGGCTCCTGCCTCCACCACGTCAGGCATGATCCCACGAGCAGCCACACCTGCAGCCACAGTGGCTGCTCCACAGCCTGCTGTCACCAAGCCCTTGTTTCCTAGTGCAGGACAGATGGGGACTCGAGCTCCCAGCACAAGCTCAGCCTCTTCCAGTATGGACACTTTGTCAGCACCCTCTAAGCCGCTGTCGCAAGCTCAGCAGGGTGTGCCTGGGGCAGCAGTGGGGCTTTCAGCCTCTTCTTCTGCTGCTCCCAAAGCCACATTCCCAGCCTACAGTCAGCCTGCGCCCTCTGCTGCCAGTGCAGGCAGCACTGTGGCCAAACCTGCCACCCCCATTACAAGTAAGCCTGCCACCCTCACCACTACCAGTGCAACCAGTAAGTTGATCCACCCTGATGAGGATATCTCTCTGgaagaGCTGCGTGCTCAACTACCACGCTACCAGTGTAAGATCCCTAGCACAGGGCAGACGCACATCAGCACTCCTCCTGTTGGGCCAATGGGAGGGGTGATACCTGCTCAGCAGGGTGCTTCTTCACAGCAGCCAGGAGCCAGGCATCCCATGCATGGGCCATATGGTACCCCATCCCAGGCAGTGCCTGGCTATGTGCCAGGGGCAATGTCACCTTACGGGCAAGGCCCCCCAATGGTTCCTCCTTACCAGGGAGCTCCTCCAAGGCCACCCATGGCCATGAGGCCTCCTGTAATGTCCCAGGGAGGCCGTTATTGAAGCTCAAACACCAGTCTCCGATAGGTTTTTAGAAGTGAAGTTTAGTAAATATGGTTCGTAATAATTTGAAGCGGCTGGAGTAACGTGAACAGTACTGCACCTTTTATCAAGGCAAGTCTTTGTAaacatactactgtactaaacaaaTTAAGCCTTCACAGCACCTTTAGGTGCTGTTGGACTTCATGTCCCCAGCTTTGCTTGGTGAGGGCTTCAGTTAGCTATAACTGTTTTTGTATGCCTGATTATCCTTACTTACATAAGTAATAGCTGATGTGAAAAGtgtctgtattattattattatgcaaacTGTAATAAACGGTGTTGAAAACTTAA
>XM_026916638.2
GACAAATGACAGTGAAAAGCGGACTAGTGGCAACTCTATCACTCCgttgttttcttgtttctttctctcctatTCTCACACTCCGCTCCAGTAGGGGGCGATATGGTAGCGCTACAGCTTCAAACTTCCCGTTTAACACTTTCGCACGTTTCCGTCTGCGCCATTTTCTTCTGCCAAATGTTCGGTTCGTGCACCACATCTTGGTGATTCACAAACTAATTGTACACTACTCTACTAAAACATgggaaggaaaaagaagaagcagatGAAGCCATGGTGTTGGTATTGTAATAGGGATTTTGATGACGAAAAGATTCTTATTCAGCACCAGAAAGCCAAACACTTTAAGTGTCACATATGTCATAAAAAGCTATACACTGGTCCGGGCCTGGCCATCCACTGTATGCAGGTTCACAAAGAAACAATTGATGGTGTTCCCAATGCAATACCTGGAAGAACAGACATTGAACTGGAAATTTATGGGATGGAGGGTATTCCAGAGAAAGATATGGAAGAAAGGAGACGGGTACTCGAGCAGAAAACACAGGaaaaccagaaaaagaaacagaaccaAGATGactcagatgaggatgatgatgatgaagaggcaGGACCCTCATTCCAGCAGGCAGCAGCCCAGCCTCCGGCCGCTTACACTCCTATGACACAGCCTGGAATGGCGCCTGTGCCCACACCAGGGATGCCACCTGGGAGCTACTCAGGAATGCCACCAATGATGCCTGCAGTCCCCCCCATGATGCCAGGGATGCCCCCAGTCATGCCAGGAATGCCACCTGGcatgATGCCCATGGGTGGGATGATGCCACCTGGACCAGGAATGCCTCCGATGATGCCAGGCATGCCACCAGGCATGCCCCCTCCTATGGGTCATCGTCCAGGTATGAACCACATGCCACAGGCTCCTGCCTCCACCACGTCAGGCATGATCCCACGAGCAGCCACACCTGCAGCCACAGTGGCTGCTCCACAGCCTGCTGTCACCAAGCCCTTGTTTCCTAGTGCAGGACAGATGGGGACTCGAGCTCCCAGCACAAGCTCAGCCTCTTCCAGTATGGACACTTTGTCAGCACCCTCTAAGCCGCTGTCGCAAGCTCAGCAGGGTGTGCCTGGGGCAGCAGTGGGGCTTTCAGCCTCTTCTTCTGCTGCTCCCAAAGCCACATTCCCAGCCTACAGTCAGCCTGCGCCCTCTGCTGCCAGTGCAGGCAGCACTGTGGCCAAACCTGCCACCCCCATTACAAGTAAGCCTGCCACCCTCACCACTACCAGTGCAACCAGTAAGTTGATCCACCCTGATGAGGATATCTCTCTGgaagaGCTGCGTGCTCAACTACCACGCTACCAGTGTAAGATCCCTAGCACAGGGCAGACGCACATCAGCACTCCTCCTGTTGGGCCAATGGGAGGGGTGATACCTGCTCAGCAGGGTGCTTCTTCACAGCAGCCAGGAGCCAGGCATCCCATGCATGGGCCATATGGTACCCCATCCCAGGCAGTGCCTGGCTATGTGCCAGGGGCAATGTCACCTTACGGGCAAGGCCCCCCAATGGTTCCTCCTTACCAGGGAGCTCCTCCAAGGCCACCCATGGCCATGAGGCCTCCTGTAATGTCCCAGGGAGGCCGTTATTGAAGCTCAAACACCAGTCTCCGATAGGTTTGGTTTTTAGAAGTGAAGTTTAGTAAATATGGTTCGTAATAATTTGAAGCGGCTGGAGTAACGTGAACAGTACTGCACCTTTTATCAAGGCAAGTCTTTGTAaacatactactgtactaaacaaaTTAAGCCTTCACAGCACCTTTAGGTGCTGTTGGACTTCATGTCCCCAGCTTTGCTTGGTGAGGGCTTCAGTTAGCTATAACTGTTTTTGTATGCCTGATTATCCTTACTTACATAAGTAATAGCTGATGTGAAAAGtgtctgtattattattattatgcaaacTGTAATAAACGGTGTTGAAAACTTAA
>XM_026916639.2
tctttctctcctatTCTCACACTCCGCTCCAGTAGGGGGCGATATGGTAGCGCTACAGCTTCAAACTTCCCGTTTAACACTTTCGCACGTTTCCGTCTGCGCCATTTTCTTCTGCCAAATGTTCGGTTCGTGCACCACATCTTGGTGATTCACAAACTAATTGTACACTACTCTACTAAAACATgggaaggaaaaagaagaagcagatGAAGCCATGGTGTTGGTATTGTAATAGGGATTTTGATGACGAAAAGATTCTTATTCAGCACCAGAAAGCCAAACACTTTAAGTGTCACATATGTCATAAAAAGCTATACACTGGTCCGGGCCTGGCCATCCACTGTATGCAGGTTCACAAAGAAACAATTGATGGTGTTCCCAATGCAATACCTGGAAGAACAGACATTGAACTGGAAATTTATGGGATGGAGGGTATTCCAGAGAAAGATATGGAAGAAAGGAGACGGGTACTCGAGCAGAAAACACAGGaaaaccagaaaaagaaacagaaccaAGATGactcagatgaggatgatgatgatgaagaggcaGGACCCTCATTCCAGCAGGCAGCAGCCCAGCCTCCGGCCGCTTACACTCCTATGACACAGCCTGGAATGGCGCCTGTGCCCACACCAGGGATGCCACCTGGGAGCTACTCAGGAATGCCACCAATGATGCCTGCAGTCCCCCCCATGATGCCAGGGATGCCCCCAGTCATGCCAGGAATGCCACCTGGcatgATGCCCATGGGTGGGATGATGCCACCTGGACCAGGAATGCCTCCGATGATGCCAGGCATGCCACCAGGCATGCCCCCTCCTATGGGTCATCGTCCAGGTATGAACCACATGCCACAGGCTCCTGCCTCCACCACGTCAGGCATGATCCCACGAGCAGCCACACCTGCAGCCACAGTGGCTGCTCCACAGCCTGCTGTCACCAAGCCCTTGTTTCCTAGTGCAGGACAGGCTCAGCAGGGTGTGCCTGGGGCAGCAGTGGGGCTTTCAGCCTCTTCTTCTGCTGCTCCCAAAGCCACATTCCCAGCCTACAGTCAGCCTGCGCCCTCTGCTGCCAGTGCAGGCAGCACTGTGGCCAAACCTGCCACCCCCATTACAAGTAAGCCTGCCACCCTCACCACTACCAGTGCAACCAGTAAGTTGATCCACCCTGATGAGGATATCTCTCTGgaagaGCTGCGTGCTCAACTACCACGCTACCAGTGTAAGATCCCTAGCACAGGGCAGACGCACATCAGCACTCCTCCTGTTGGGCCAATGGGAGGGGTGATACCTGCTCAGCAGGGTGCTTCTTCACAGCAGCCAGGAGCCAGGCATCCCATGCATGGGCCATATGGTACCCCATCCCAGGCAGTGCCTGGCTATGTGCCAGGGGCAATGTCACCTTACGGGCAAGGCCCCCCAATGGTTCCTCCTTACCAGGGAGCTCCTCCAAGGCCACCCATGGCCATGAGGCCTCCTGTAATGTCCCAGGGAGGCCGTTATTGAAGCTCAAACACCAGTCTCCGATAGGTTTGGTGATTCACCCTTTTCTCATGTAATGGTGTTCTTAAGAAGCCAAATCATTAAGCATAATTGTAATTCAATTTGTCTTATAACGGAAATGGAAAAACAGCACTGGTTATGCATGAAACTTTAAATTTTGCATAGTTTTTATTTGGACCTCTAATATGTTGCCGATTCTATAGTGTGGCTTTTTTCCTCCCCCTATGTTCCGTTTAGGTTTTTAGAAGTGAAGTTTAGTAAATATGGTTCGTAATAATTTGAAGCGGCTGGAGTAACGTGAACAGTACTGCACCTTTTATCAAGGCAAGTCTTTGTAaacatactactgtactaaacaaaTTAAGCCTTCACAGCACCTTTAGGTGCTGTTGGACTTCATGTCCCCAGCTTTGCTTGGTGAGGGCTTCAGTTAGCTATAACTGTTTTTGTATGCCTGATTATCCTTACTTACATAAGTAATAGCTGATGTGAAAAGtgtctgtattattattattatgcaaacTGTAATAAACGGTGTTGAAAACTTAA
>XM_034310063.1
AAAACCGGACAAATGACAGTGAAAAGCGGACTAGTGGCAACTCTATCACTCCgttgttttcttgtttctttctctcctatTCTCACACTCCGCTCCAGTAGGGGGCGATATGGTAGCGCTACAGCTTCAAACTTCCCGTTTAACACTTTCGCACGTTTCCGTCTGCGCCATTTTCTTCTGCCAAATGTTCGGTTCGTGCACCACATCTTGGTGATTCACAAACTAATTGTACACTACTCTACTAAAACATgggaaggaaaaagaagaagcagatGAAGCCATGGTGTTGGTATTGTAATAGGGATTTTGATGACGAAAAGATTCTTATTCAGCACCAGAAAGCCAAACACTTTAAGTGTCACATATGTCATAAAAAGCTATACACTGGTCCGGGCCTGGCCATCCACTGTATGCAGGTTCACAAAGAAACAATTGATGGTGTTCCCAATGCAATACCTGGAAGAACAGACATTGAACTGGAAATTTATGGGATGGAGGGTATTCCAGAGAAAGATATGGAAGAAAGGAGACGGGTACTCGAGCAGAAAACACAGGaaaaccagaaaaagaaacagaaccaAGATGactcagatgaggatgatgatgatgaagaggcaGGACCCTCATTCCAGCAGGCAGCAGCCCAGCCTCCGGCCGCTTACACTCCTATGACACAGCCTGGAATGGCGCCTGTGCCCACACCAGGGATGCCACCTGGGAGCTACTCAGGAATGCCACCAATGATGCCTGCAGTCCCCCCCATGATGCCAGGGATGCCCCCAGTCATGCCAGGAATGCCACCTGGcatgATGCCCATGGGTGGGATGATGCCACCTGGACCAGGAATGCCTCCGATGATGCCAGGCATGCCCCCTCCTATGGGTCATCGTCCAGGTATGAACCACATGCCACAGGCTCCTGCCTCCACCACGTCAGGCATGATCCCACGAGCAGCCACACCTGCAGCCACAGTGGCTGCTCCACAGCCTGCTGTCACCAAGCCCTTGTTTCCTAGTGCAGGACAGATGGGGACTCGAGCTCCCAGCACAAGCTCAGCCTCTTCCAGTATGGACACTTTGTCAGCACCCTCTAAGCCGCTGTCGCAAGCTCAGCAGGGTGTGCCTGGGGCAGCAGTGGGGCTTTCAGCCTCTTCTTCTGCTGCTCCCAAAGCCACATTCCCAGCCTACAGTCAGCCTGCGCCCTCTGCTGCCAGTGCAGGCAGCACTGTGGCCAAACCTGCCACCCCCATTACAAGTAAGCCTGCCACCCTCACCACTACCAGTGCAACCAGTAAGTTGATCCACCCTGATGAGGATATCTCTCTGgaagaGCTGCGTGCTCAACTACCACGCTACCAGTGTAAGATCCCTAGCACAGGGCAGACGCACATCAGCACTCCTCCTGTTGGGCCAATGGGAGGGGTGATACCTGCTCAGCAGGGTGCTTCTTCACAGCAGCCAGGAGCCAGGCATCCCATGCATGGGCCATATGGTACCCCATCCCAGGCAGTGCCTGGCTATGTGCCAGGGGCAATGTCACCTTACGGGCAAGGCCCCCCAATGGTTCCTCCTTACCAGGGAGCTCCTCCAAGGCCACCCATGGCCATGAGGCCTCCTGTAATGTCCCAGGGAGGCCGTTATTGAAGCTCAAACACCAGTCTCCGATAGGTTTGGTGATTCACCCTTTTCTCATGTAATGGTGTTCTTAAGAAGCCAAATCATTAAGCATAATTGTAATTCAATTTGTCTTATAACGGAAATGGAAAAACAGCACTGGTTATGCATGAAACTTTAAATTTTGCATAGTTTTTATTTGGACCTCTAATATGTTGCCGATTCTATAGTGTGGCTTTTTTCCTCCCCCTATGTTCCGTTTAGGTTTTTAGAAGTGAAGTTTAGTAAATATGGTTCGTAATAATTTGAAGCGGCTGGAGTAACGTGAACAGTACTGCACCTTTTATCAAGGCAAGTCTTTGTAaacatactactgtactaaacaaaTTAAGCCTTCACAGCACCTTTAGGTGCTGTTGGACTTCATGTCCCCAGCTTTGCTTGGTGAGGGCTTCAGTTAGCTATAACTGTTTTTGTATGCCTGATTATCCTTACTTACATAAGTAATAGCTGATGTGAAAAGtgtctgtattattattattatgcaaacTGTAATAAACGGTGTTGAAAACTTAA

Function

symbol description
znf207 Enables microtubule binding activity. Involved in several processes, including mitotic nuclear division; mitotic spindle assembly checkpoint signaling; and protein stabilization. Located in kinetochore; nuclear lumen; and spindle matrix.

NR:

description
PREDICTED: BUB3-interacting and GLEBS motif-containing protein ZNF207-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916637.2 False 1984 mRNA 0.51 12 18711080 18720334
XM_026916638.2 False 1989 mRNA 0.51 12 18711080 18720334
XM_026916639.2 False 2054 mRNA 0.49 10 18711080 18720275
XM_034310063.1 True 2189 mRNA 0.49 11 18711080 18720341

Neighbor

gene id symbol gene type direction distance location
LOC117598995 LOC108191637 coding downstream 133703 18576604 ~ 18577377 (-)
LOC117598994 LOC101884462,LOC107081104,LOC101885893 coding downstream 316102 18389882 ~ 18394978 (-)
LOC113528252 dnaaf5 coding downstream 549201 18101441 ~ 18161879 (-)
jmjd6 jmjd6,LOC107748872,LOC107565873 coding downstream 725192 17981013 ~ 17985888 (-)
foxj1a LOC108274501,LOC108274674,LOC108263299 coding downstream 776664 17930709 ~ 17934416 (-)
slc25a23b slc25a23b,LOC108274688,LOC107601238,LOC107698653,LOC108444036,LOC107724434,LOC107689624 coding upstream 15312 18735653 ~ 18756676 (-)
timm29 c2h19orf52 coding upstream 69840 18790181 ~ 18792959 (-)
carm1 carm1,LOC107689626 coding upstream 81690 18802031 ~ 18818309 (-)
aldh3b1 aldh3b1,LOC108258475,LOC108444046,LOC107698763 coding upstream 115852 18836193 ~ 18843733 (-)
gna13b LOC108278714,LOC108438014,LOC107721501,LOC107719992,LOC107654495,LOC107590387,LOC107688114,LOC107601276 coding upstream 131115 18851456 ~ 18872146 (-)
LOC117599003 NA non-coding downstream 634693 18070785 ~ 18076387 (-)
G213028 NA non-coding downstream 667801 18041404 ~ 18043279 (-)
G212891 NA non-coding downstream 810810 17900070 ~ 17900270 (-)
G212871 NA non-coding downstream 824838 17886012 ~ 17886242 (-)
G212856 NA non-coding downstream 831234 17879629 ~ 17879846 (-)
G213407 NA non-coding upstream 72094 18792435 ~ 18849147 (-)
G213549 NA non-coding upstream 303417 19023758 ~ 19072985 (-)
G213716 tnrc6a non-coding upstream 696843 19417184 ~ 19422415 (-)
G213879 NA non-coding upstream 942996 19663337 ~ 19663762 (-)
G214159 NA non-coding upstream 1300211 20020552 ~ 20056144 (-)
LOC117598999 NA other downstream 333717 18375684 ~ 18377363 (-)
mettl23 mettl23 other downstream 656864 18050735 ~ 18054216 (-)
tsen54 tsen54 other downstream 838499 17811613 ~ 17872581 (-)
G212750 LOC100136012,LOC107575789 other downstream 1035796 17674827 ~ 17675284 (-)
LOC113528038 caskin2 other downstream 1192553 17390186 ~ 17518527 (-)
si:dkey-204f11.64 LOC108274053 other upstream 103130 18823471 ~ 18827734 (-)
rbbp6 rbbp6 other upstream 708876 19429217 ~ 19448559 (-)
lyar lyar other upstream 1220013 19940354 ~ 19984149 (-)
slc2a9l2 slc2a9 other upstream 1319446 20039787 ~ 20138213 (-)
hs3st1 hs3st1 other upstream 1484998 20205339 ~ 20213629 (-)

Expression


Co-expression Network