mfsd11 (mfsd11,mfs11)


Basic Information

Item Value
gene id mfsd11
gene name mfsd11,mfs11
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 18021085 ~ 18043102 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916702.2
TCAGCTGATTCCTCAcatgacagatttttttaaccAGTTCAGTGTTGAAGCGGCTGATTAGTTAGCAGTGTGAAAACTGGTCGAAATACTAAAGTTTGGTTGGCACGCACAATAATACGTAAACTCGGCATGGTTCTGAGACCCTACAAActgtgaaaaaacaacaacaacaaaaaaaaacaaaaaacgatAGGATCTTACCGCCGGGTGTTTTCGAGTGAGGACATCACACCAAGATGAGGCCAGAAAGAAAATCACTGTTAAACATCATTATATTGGGTCTTGGCTTTATGTTAATATTCACCGCCTTCCAGACCTGTGGAAACATTGAACAAACTGTGCTTAAGAGTTTTAATAGCACAGAATTCCATGGAAGTGGGTACACAAGCATGGCTATTATCTATGGAGTCTTCTCTGCATCAAACCTAATTGCTCCTTCAGTGGTAGCTGTCATTGGACCTCAGTTGTCACTGTTTTTCAGTGGACTAGTTTACAGTGGATACATCGCAATGTTTATTCACCCTTTTACCTGGAGTTTCTACACTGCTTCAGTCTTGGTTGGAATTGCAGCTGCAGTGCTGTGGACAGCTCAGGGGAATCTTCTTACCATCAATTCCAGTGACTCTTCTATTGGCCGAAACAGTGGGATATTCTGGGCTTTGCTGCAGTTTAGCTTGTTCTTTGGCAATCTTTACATTTATGTTGCCTGGCATGGGAAGGTTCACATATCAGATAAAGACCGTCAGACGGTGTTCGTTTCACTCACCATCATCAGTCTGGTTGGAaacttcctcttcttcctcattcAGCGGACTGAGACAGAGGTTGTGCCTACTGAGGTGTCTGAATCACCGCTGTCTGGAGATGCTTGTGAAAGTGACTCAGTGGTGGTAGCACCCCAGGGTCTAGGTGCTCAGGCTTTGTTGGcattcaAGAAATCCATTCAGCTGGCCATGACCAAAGAAATGCTGCTGTTAAGCATATCCATCGCATACACAGggCTGGAATTGACTTTTTACAGTGGGGTTTATGGGACATGCATAGGAGCCATGACTCGCTTTGGTGATAATGCCAAAAGTCTCATTGGCCTCTCTGGAATTTTCATTGGTGTTGGCGAAATACTTGGTGGGTCTGTGTTTGGAATGCTGAACCAGTGTAACCGGTATGGGAGGAACCCTGTGGTGCTTTTGGGATTGGTCACCCATTTTTTGGCCTTCTACCTAATATTCCTGAACATAGCCAGTGATGCTCCCTTAGCCCCAGAGGAGGGGACACAGCTGTACAGCTTCATCACTCCCAGCATGGACTTGGCATTGTTCTGTAGTTTACTGCTTGGCCTGGGTGACAGCTGTTTCAACACACAACTGCTCAGCATCGTGGGCTTCATATTTCGTGATGACAGCGCCCCAGCATTTGCTGTTTTCAAGTTTGTACAGTCCATTGCTGCAGCTCTGGCATTCTTCTACAGTAATTATCTCCAGCTACACTGGCAACTGCTCATTATGGTACTGGTGGGCTTTACTGGcaccctctctttctttgtggctgaatggatgGTGGCCAGCTGCAGACGAAACTCAGATTATGACAGCATCTAACGGCTAGAGTCAGTGAGAATGTGGCAGCAGAAGACTTCTTTTTTGTGCTCTCCTTTTCAACTTTTTCCTGAAGCTTTCTGGATCCTCAGGATTGGTATGGAATGAGCAGTTCTGCAGAATTTTGTAATActcatttgggttttttttgctcacTGATCTCTGCACTAAAAACATATCTTGAACAGATTCTTTAAGCTCTGGAGTACACAGTTATTGTattgtttcttctttcttgcAGCTTAGCTGCACacaaaataatctttttaaatatacaaagcCATTAAAATCACTGTTTGCTTTTGtggtaatttaattttaattttctaaagGGAGCAGTTGGTTGAGTACACCACTCAAAATTGTAATAGTATAAAAGTTGAAAAAGGTATGGTTTAAATTCATGTAATTTCAGGCATAATTCCAGCCATATCAACAGAACAGCATACAACTATATGACAACTGTCTCAACACAAGTAAATTGCACTATAGCAATTCCTCATTCTTAAGAAGGGACATTTCAAAAGAGTAAATTTTACTAGTCGAATCAAGTCATTACAGAGAATTGATATAATTCCAATGCAAAATTGCATAAAGACATTTGCTAGAATTAAAACACAGTTTCatttaaagtgtattttttccacattttaatatttagcaGCCACTGTCCACAGTATAATCATCTAATGTTAATGCAAAAGCTATAGCTTCAGTGTTATTCACAGTCtcagatttatttttggaaatttaGAGCAGTAATATTGGATCTTTGTTTAAATGATACCTTGCCAAAATGTTCAATGATGATTTTGACGTGAAGGTTTAGTGATGATGAAAGAATCTGCAAACCTGTAGGCCACCTCTCCAGGTATGCATTTCctcattatttatttgaacaCTACAACAGAATAACTGTATTTGTACAAAACATCACTGTGATAGAACATTACTTTGCATTACATTACTTGAATTGTCTGAAGTATATGTGAGCTTTCTGTTGAATGGAACACTCTATCGTGAACTGTAAAGTTGACAAATATCACTTGTCAAAGCAGTAACTTAATCTGCAGTACAATTGCAAGTATAGGTGGGAGGTAAATATGAACTAAGGACTCTTTCAGCAAGATATCTTTGTTTATTGGGATGCACTGTATATGACcagttcagctttaatttagGGCAGTTTATTGGATGTTAAATTTGTGTCCATAAAATGTAGGCTGTAGGTACAATTTTACTTGAATCATATTATAGGCCTACTGTAACCCTAACCCAAGGATGCCAGTATttaatgcttgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtacacacacacacacacacacacacagaataaagtttattttgcaCCTTTATTGTTTACTCATGATACTTTTATGATGATTTGCAAATTTTAGTGCTTCTGTGTACTGTTTATTAGATGCAGATATACTCCCAGGAAATATTAATTTAGAGCATTTCCATCAAAAGTGCAATTTggtaaatgtataattaaaaaagacaCATAGTACAAAATTA

Function

symbol description
mfsd11 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MFSD11 (major facilitator superfamily domain containing 11).

NR:

description
PREDICTED: UNC93-like protein MFSD11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916702.2 True 3139 mRNA 0.39 14 18021085 18043102

Neighbor

gene id symbol gene type direction distance location
LOC113528388 myadml2,LOC108275479,LOC103027436,LOC107671249,LOC107571305,LOC107717480,LOC107552108,LOC107675441 coding upstream 210595 17808272 ~ 17810490 (+)
ccdc137 NA coding upstream 253416 17749174 ~ 17767669 (+)
trap1 trap1 coding upstream 679010 17319742 ~ 17342075 (+)
tfap4 tfap4,LOC107695712,LOC107601578,LOC107661646,LOC107553667 coding upstream 935330 17067237 ~ 17085755 (+)
LOC117595691 NA coding upstream 1022391 16997366 ~ 16998694 (+)
LOC113527984 LOC108258094,LOC103035820,LOC108438916 coding downstream 18935 18062037 ~ 18063661 (+)
tac4 NA coding downstream 317679 18360781 ~ 18368589 (+)
LOC113528424 NA coding downstream 406184 18449286 ~ 18451161 (+)
sept9a sept9,LOC108411966 coding downstream 429282 18472384 ~ 18558892 (+)
tnrc6c1 tnrc6c,LOC107724432 coding downstream 590396 18633498 ~ 18697593 (+)
G212899 NA non-coding upstream 38279 17980998 ~ 17982806 (+)
G212889 NA non-coding upstream 122104 17898781 ~ 17898981 (+)
G212870 NA non-coding upstream 134803 17886009 ~ 17886282 (+)
G212804 NA non-coding upstream 194735 17819418 ~ 17826350 (+)
G212783 NA non-coding upstream 239157 17781712 ~ 17781928 (+)
G213191 NA non-coding downstream 474211 18517313 ~ 18565782 (+)
G213192 NA non-coding downstream 487257 18530359 ~ 18534344 (+)
G213221 NA non-coding downstream 663315 18706417 ~ 18713626 (+)
G213244 NA non-coding downstream 803114 18846216 ~ 18898291 (+)
G213314 NA non-coding downstream 915928 18959030 ~ 18960740 (+)
cenpx cenpx other upstream 288079 17698673 ~ 17733006 (+)
srl srl,LOC108261333,LOC107695714,LOC107661647,LOC107718567,LOC107553668 other upstream 907929 17087284 ~ 17113156 (+)
LOC113527983 sstr5,sstr2,LOC108260271,LOC103373483,LOC107083133,LOC104918336,LOC102291375 other upstream 1874759 16140330 ~ 16146326 (+)
G211913 NA other upstream 2052326 15918217 ~ 15968759 (+)
LOC117598752 NA other upstream 3029635 14988086 ~ 14991450 (+)
LOC113528485 prkar1b,LOC107661853,LOC107653458 other downstream 140591 18183693 ~ 18342960 (+)
LOC113528171 NA other downstream 366739 18409841 ~ 18415347 (+)
zgc:163143 NA other downstream 382077 18425179 ~ 18434528 (+)
smim22 NA other downstream 871624 18914726 ~ 18919942 (+)
G213491 NA other downstream 1100972 19144074 ~ 19145240 (+)

Expression


Co-expression Network