prr14


Basic Information

Item Value
gene id prr14
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 3200147 ~ 3213935 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916799.2
aatggtTAGGGAGCGTCGGGTGGGTAGAGTGGGttgagaggagaaaaaaaaaaaatggcgaAACTTGGAGCTCCCCTCTGGCGTGAAAATGTCCCACATCACGGGTTTGTCGTCGTTTTTTGAGCAGTAAGTCCTAAAATTCAGTTACGGTGTGCACTCAAAGAAGCcggatgtcttttttttaatcttgtagGTTGAGGCGGTCAGAGGGATATGGTTGTGGACATGCTGACTTCTCCCCAAGAGCAAATCCCTCCGCGTGTCCCTCCGACGGAGGAAGACGGCCGGAATTCCGCCACCGCCCTTAGTGCCAACCGCCACAGTGACCATCATCCTCACGCTGTCCCTCACGCTTCGGTTTTTCACCGCTCTGATGATCCGGGAAGTTCATCAGCAAGCAGAAGTTTGAACATGGTCAGGACGAACCCCAGCGATGGTGCCGACTCTTCAGAACAGCAGCGAATGAACTCGTCAGAAAGAGACAGCATGgaaAGCCATGAAGACAGAGACGAGAGTCGACACAGACAGCCCGAagaTAAAACTGCAAGGTCCTGTAAACGCAAGCTGGATTTAACGTCGTTATCTTTAGGGTCACATGACGCAACTAAAGCCCGGGATTCTGAGAAAAAAGATCCTGAAAGCCCTCCACCAGCAAAGAGATGGGTGATCGGCCCTCTTTTCCAGTCATTCAAATCCAAGATGGCGAGCTTCACGGAGATCGTCATGAGTCCCGTGCGGCTTTTTAAACCCAACGATCTTCCAGCTGGGTCAAACAACGAAGCTCCGTCAGTGACTCATGTGAACAAGGAGGATGTAGGAACGGACGGCAAAGATGTATTTtcaaaaaaagaggagaaaaagattACTCCTGTGACAAAATTGCCGGTCGTCCAGAGATTGAATTTTGACACCAATTCAAGTGACGTGGGCGATTCAGAGCAGAATAAAGTGACGATTTCGCAGAGCGGATCAGAACAACAACAAGACTCGATCCCAGAGGATGATGGGTCTTTTGGGTCTTTAAATTCTGCAAGCACCAGAAGATCGACCAGTCAGATTACAGAAGCGGTCAGGGCTTCAAATGTTCAGCAAAGCAGCagggaagaaaaacagaactgCAAATCCATGAATCCAAATCCACCCCCACGCACAGGTCTGGTGGACAGTACTGACTCTGTCAGGAGGAGCCTTACAAAAGGTTCTGAATCTGGGAAAGCAGTACAGGAATTAATCGTGTTGTGTGAAGAAAAGGCTTTGGATGAGTTAACAAAGCACACAGAGCAGGCAGATAAGAGTAAAAGCCAAGATCAAGAGCAGCCTTTGCCCAAAAAGTTGAGGCTTCCAACTCCGGCCAttggaaagaagaagaaaggtaGAGGAATGGAGAGAAGTGAACTAGCGGAAATGGTGAAAAGGGTGGAAAAAGAAGGCACCATTGGAACAGACCGAGTGGAAAAATCTCCAACAGTCACGCAGACCAAGACTTTTCAGAGCTCGAGGCTGGTTCAGACCGGTAAACGGATGAAGGTTCAGGTCTCAGATGAGTGTCTTAGCACTTACAATTCTGGCGATGTTCAAATGTCAGACCTAAACTCTTGTAAttcctcagagagagagaaaataggtCAGATGCGGGCATCCAGAAGTAGAAGTAAAAGGGAAAAAGATGTGAAATGTACATTAGTAGCCTTGGATATCATGAGTGCCACCAGTGGTGCCACCAGAAGTGCCTTGATTGATCTTATCAGCACAAATGTGACAAACGATTCTACACCAGCAGAAGGTCCTCCATTGTCAGGATCCTTGACGTGGGCTAGTTCCCGAACGACAAGACAGCGTAAGAACAACAAAGTGTGCGAAGAGAGGAAATCTGATATTGCAGAAAGCTGCTCTATTGATCCGGCAGAGTGTTTAAAGTCAAGCAATGGAACTTCAGTTTCAAAACTGGTGCGAAGGAACAATATCCGTCAAGCAAAGCGCAAATCAGAGACTTCCGCTACATCGGCTGCTAAAAAGCCACAAGTTAACAAAAAGAGCTTGAATACGAGAAGAGTTAAAAGAGCCATGGATGCGTTTGAAGATCAGGGGATGTCCATGTCTCTGACGCTGGAGGTCGGATCAGGAGTGGACGGAGACAAAGAAGCGACCTCTATCATGAGCTGTGGAATAACGACAAGGGGCAGGAAAATGGGAGGGGACGTGATGCTAGCGGATGCTTCCTGTCCATCCAGAGTGACACCCGAGGACCGCTTTTGTGTAAAAGATGACAGGTTAACAGACATGGATGGTGGATATCTTGAGAAAAAGGACAAACGGAGGAGGCGGTGTATGTAttcagagagaagagagacagacgaTGAGCTAGATCAGGAAGACGACTCAAAACCAGGACAGACGTCATCAGGTTGTGGCTCAAACCGGCTCAAGCGCAGCCTCTCCTGCCCCGACATCACCTCACTGCAGCACGGCCACGACGCCTCTTCAGCTCCCGTCAGCGAAAAAACCCTTTGTCATCCTTCTCCCCTGAAAAAGGTGCCTCATTTTAATGTAAGTGTACCCTCTCCGTTCAAGCGTGCTCGCAGACACACGGTGTGCAGTGTGGAAATCGAGCGCGAGATCGCCCCCTTGTGCCTCCGCAAGGAAGTTTATCCAAAGTGGGGCAGCACTTCCAATTATTTGTACCCACGCTCTCCCTCCAAATCCTTGGCATCCCTCGTCTCCTGTTTTTTATCGAGCCCCCAGGCATTCCTGTCTAAGAAATCGAGTCGAGGACACAACGATGACAGCGGATACGGAGCCAGCAGTAGTGACCTTCGCAATGTgtcgtcttcttcttctctttcaccACCTTTGCTAAATTCTCCCGCTTCCTCCAGCGTGATGAGTGGATCCGCTTTCTTCGCCGATGctccacacacacctgagcaatCCTCCGTGTCCTCACACTGCAGTGTGTATGATGCCGTATCGATGGAGGCTGATGAAGGTGTGGTTCAGCAGGACAGTGAAGAAAACGAGCAATCCTCAGCTGTATCAGAGGAGAAAGCTCTGTCTGACTCGGAGATTAAGaCCGACAGCAAGCAAATGGAACGAAGAAAAGTGTCCTCCATCCGCATCCGCAAAACTCTTCCCAAACCACAGTACAATCTGACTCCGATGGGTCTTCCCAAAGCCGTCAGGATAAAGAAGAAAGTTTTTAGCGTGGAGGAAATCTACACAAACAAGAACTTCTTCAAACCTCCTGAAGGACGCTTAGAGACCATATTTGAAGTCCCTCTTAGCCGGCGAGACGGTTCCCAGTCACTGATTGGTCCGAAACGGGTAAAGCGCTTTGTCGAGTTTCCTGAACTGGGTGTGGTCAGGAAGCCAAGGAAGCCTCTCATTGGTGGAGCAGGAGGGGGTGGAGCTCAGAGAAAAGCAGCAGGGAATTCTGGGATGGGAAGAACCCGCAGAGGCAGAGAAGAAGAAGCACTTCATTTGCAGGACTTTGATTCACTCCTGTGCTCAAAACTGAACGAACTGGACCTGTGGATGGTGACAGAGCAGATGGTTTACTGAAACCTTCACAGTCTCGCTTTTTCTTTCTGATTCAAAGCCCATAGCATACACATGCAGAAATGTACGGTTTCATACTTGTGTACAGACAGATGCTTGTACAGTTTTAACATGAGGTTTGGCTTTGATGGCCGTGTGCGCTTATAGAGTTTTCCTGAGGGATTGAAAAGAGCACTTAACTTCAAGTGAGTGTCTGTCCCAAGCCCTTTTCCAGACTTCAGAAATGGATTTAGAGATGCACTGACTTAATAACGAATAGAGCTGTCTCACCAGTGTGGGCTTGAAATAATGTGCAGAAATGATCCGATTTGACACTTGTCgcaatttagcatttttgttgtgtttaaattaattttttaccGCAGATATTGATTAACTTTATACagcacatattattattattattattattatatctctCACAAGCTCAGCTATTTCATACTTTTAAAAGAAACTTGTGACCTAGTCGTGGGGCAGCGAACACATGACTCACTCGCCATTCATGCGGTTAGAGTTGtaagaacactgttgctaggcaacagggGAAGTGAACTCATGGCGGTGAGGAGACGTCTGCTTCTGAAGTCATTAATGCCACAAGAGTGAGCTGTTTACACGATGAACACAGCTTCATTTCAATTCATCTGCTCCTCTCATGAAATAGTTTCCTTCTAATGTATAAAACCAATTCTAATGatcaaactgtattttttttgtcgTCAGCATAAATTGTTAAACACTCTGTCCAGCATCTTTGAATAAGTGTTGGTGCAGAATCGTTTACAGAAGATCTTCCTACAAGTGCTTAACGTCCATCAAGTCAGTGTTAAGATTACGGCCAATATTCAGAGGTCTGGTATcgaaaatggaaaataaataaattgatgcATCTGTAGCTTTCGTTAAGTCGTGAGGATGCCTGACTAGTTCACTTGGTCTCTCAGGGTAccgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgcgtgtgtttttgttttttactttttattttttttacgtGACCATGTTGGTTTTGTATAAATGCTTTTGTAAAATAGGAAGAAGGAACACTGTTTATCGTTTTGTAATAATCTGTTACTAGCTTATAACCAGTCAACAGCCCTGTTGCAATATCTTCGTTTTCTCTCATGCCATACAAAGACGAATCACACCGTCCATCATGTTGTCATGTGTTtattactctttttttaatgttaaataataaatacaatctATAACTTGTAGCTACAAAAGCATCCATCCTGTATGTTTCAGAAACAAGTggaggtgaatttttttt
>XM_034309806.1
aatggtTAGGGAGCGTCGGGTGGGTAGAGTGGGttgagaggagaaaaaaaaaaaatggcgaAACTTGGAGCTCCCCTCTGGCGTGAAAATGTCCCACATCACGGGTTTGTCGTCGTTTTTTGAGCAGTAAGTCCTAAAATTCAGTTACGGTGTGCACTCAAAGAAGCcggatgtcttttttttaatcttgtagGTTGAGGCGGTCAGAGGGATATGGTTGTGGACATGCTGACTTCTCCCCAAGAGCAAATCCCTCCGCGTGTCCCTCCGACGGAGGAAGACGGCCGGAATTCCGCCACCGCCCTTAGTGCCAACCGCCACAGTGACCATCATCCTCACGCTGTCCCTCACGCTTCGGTTTTTCACCGCTCTGATGATCCGGGAAGTTCATCAGCAAGCAGAAGTTTGAACATGGTCAGGACGAACCCCAGCGATGGTGCCGACTCTTCAGAACAGCAGCGAATGAACTCGTCAGAAAGAGACAGCATGgaaAGCCATGAAGACAGAGACGAGAGTCGACACAGACAGCCCGAagaTAAAACTGCAAGGTCCTGTAAACGCAAGCTGGATTTAACGTCGTTATCTTTAGGGTCACATGACGCAACTAAAGCCCGGGATTCTGAGAAAAAAGATCCTGAAAGCCCTCCACCAGCAAAGAGATGGGTGATCGGCCCTCTTTTCCAGTCATTCAAATCCAAGATGGCGAGCTTCACGGAGATCGTCATGAGTCCCGTGCGGCTTTTTAAACCCAACGATCTTCCAGCTGGGTCAAACAACGAAGCTCCGTCAGTGACTCATGTGAACAAGGAGGATGTAGGAACGGACGGCAAAGATGTATTTtcaaaaaaagaggagaaaaagattACTCCTGTGACAAAATTGCCGGTCGTCCAGAGATTGAATTTTGACACCAATTCAAGTGACGTGGGCGATTCAGAGCAGAATAAAGTGACGATTTCGCAGAGCGGATCAGAACAACAACAAGACTCGATCCCAGAGGATGATGGGTCTTTTGGGTCTTTAAATTCTGCAAGCACCAGAAGATCTGAATCTGGGAAAGCAGTACAGGAATTAATCGTGTTGTGTGAAGAAAAGGCTTTGGATGAGTTAACAAAGCACACAGAGCAGGCAGATAAGAGTAAAAGCCAAGATCAAGAGCAGCCTTTGCCCAAAAAGTTGAGGCTTCCAACTCCGGCCAttggaaagaagaagaaaggtaGAGGAATGGAGAGAAGTGAACTAGCGGAAATGGTGAAAAGGGTGGAAAAAGAAGGCACCATTGGAACAGACCGAGTGGAAAAATCTCCAACAGTCACGCAGACCAAGACTTTTCAGAGCTCGAGGCTGGTTCAGACCGGTAAACGGATGAAGGTTCAGGTCTCAGATGAGTGTCTTAGCACTTACAATTCTGGCGATGTTCAAATGTCAGACCTAAACTCTTGTAAttcctcagagagagagaaaataggtCAGATGCGGGCATCCAGAAGTAGAAGTAAAAGGGAAAAAGATGTGAAATGTACATTAGTAGCCTTGGATATCATGAGTGCCACCAGTGGTGCCACCAGAAGTGCCTTGATTGATCTTATCAGCACAAATGTGACAAACGATTCTACACCAGCAGAAGGTCCTCCATTGTCAGGATCCTTGACGTGGGCTAGTTCCCGAACGACAAGACAGCGTAAGAACAACAAAGTGTGCGAAGAGAGGAAATCTGATATTGCAGAAAGCTGCTCTATTGATCCGGCAGAGTGTTTAAAGTCAAGCAATGGAACTTCAGTTTCAAAACTGGTGCGAAGGAACAATATCCGTCAAGCAAAGCGCAAATCAGAGACTTCCGCTACATCGGCTGCTAAAAAGCCACAAGTTAACAAAAAGAGCTTGAATACGAGAAGAGTTAAAAGAGCCATGGATGCGTTTGAAGATCAGGGGATGTCCATGTCTCTGACGCTGGAGGTCGGATCAGGAGTGGACGGAGACAAAGAAGCGACCTCTATCATGAGCTGTGGAATAACGACAAGGGGCAGGAAAATGGGAGGGGACGTGATGCTAGCGGATGCTTCCTGTCCATCCAGAGTGACACCCGAGGACCGCTTTTGTGTAAAAGATGACAGGTTAACAGACATGGATGGTGGATATCTTGAGAAAAAGGACAAACGGAGGAGGCGGTGTATGTAttcagagagaagagagacagacgaTGAGCTAGATCAGGAAGACGACTCAAAACCAGGACAGACGTCATCAGGTTGTGGCTCAAACCGGCTCAAGCGCAGCCTCTCCTGCCCCGACATCACCTCACTGCAGCACGGCCACGACGCCTCTTCAGCTCCCGTCAGCGAAAAAACCCTTTGTCATCCTTCTCCCCTGAAAAAGGTGCCTCATTTTAATGTAAGTGTACCCTCTCCGTTCAAGCGTGCTCGCAGACACACGGTGTGCAGTGTGGAAATCGAGCGCGAGATCGCCCCCTTGTGCCTCCGCAAGGAAGTTTATCCAAAGTGGGGCAGCACTTCCAATTATTTGTACCCACGCTCTCCCTCCAAATCCTTGGCATCCCTCGTCTCCTGTTTTTTATCGAGCCCCCAGGCATTCCTGTCTAAGAAATCGAGTCGAGGACACAACGATGACAGCGGATACGGAGCCAGCAGTAGTGACCTTCGCAATGTgtcgtcttcttcttctctttcaccACCTTTGCTAAATTCTCCCGCTTCCTCCAGCGTGATGAGTGGATCCGCTTTCTTCGCCGATGctccacacacacctgagcaatCCTCCGTGTCCTCACACTGCAGTGTGTATGATGCCGTATCGATGGAGGCTGATGAAGGTGTGGTTCAGCAGGACAGTGAAGAAAACGAGCAATCCTCAGCTGTATCAGAGGAGAAAGCTCTGTCTGACTCGGAGATTAAGaCCGACAGCAAGCAAATGGAACGAAGAAAAGTGTCCTCCATCCGCATCCGCAAAACTCTTCCCAAACCACAGTACAATCTGACTCCGATGGGTCTTCCCAAAGCCGTCAGGATAAAGAAGAAAGTTTTTAGCGTGGAGGAAATCTACACAAACAAGAACTTCTTCAAACCTCCTGAAGGACGCTTAGAGACCATATTTGAAGTCCCTCTTAGCCGGCGAGACGGTTCCCAGTCACTGATTGGTCCGAAACGGGTAAAGCGCTTTGTCGAGTTTCCTGAACTGGGTGTGGTCAGGAAGCCAAGGAAGCCTCTCATTGGTGGAGCAGGAGGGGGTGGAGCTCAGAGAAAAGCAGCAGGGAATTCTGGGATGGGAAGAACCCGCAGAGGCAGAGAAGAAGAAGCACTTCATTTGCAGGACTTTGATTCACTCCTGTGCTCAAAACTGAACGAACTGGACCTGTGGATGGTGACAGAGCAGATGGTTTACTGAAACCTTCACAGTCTCGCTTTTTCTTTCTGATTCAAAGCCCATAGCATACACATGCAGAAATGTACGGTTTCATACTTGTGTACAGACAGATGCTTGTACAGTTTTAACATGAGGTTTGGCTTTGATGGCCGTGTGCGCTTATAGAGTTTTCCTGAGGGATTGAAAAGAGCACTTAACTTCAAGTGAGTGTCTGTCCCAAGCCCTTTTCCAGACTTCAGAAATGGATTTAGAGATGCACTGACTTAATAACGAATAGAGCTGTCTCACCAGTGTGGGCTTGAAATAATGTGCAGAAATGATCCGATTTGACACTTGTCgcaatttagcatttttgttgtgtttaaattaattttttaccGCAGATATTGATTAACTTTATACagcacatattattattattattattattatatctctCACAAGCTCAGCTATTTCATACTTTTAAAAGAAACTTGTGACCTAGTCGTGGGGCAGCGAACACATGACTCACTCGCCATTCATGCGGTTAGAGTTGtaagaacactgttgctaggcaacagggGAAGTGAACTCATGGCGGTGAGGAGACGTCTGCTTCTGAAGTCATTAATGCCACAAGAGTGAGCTGTTTACACGATGAACACAGCTTCATTTCAATTCATCTGCTCCTCTCATGAAATAGTTTCCTTCTAATGTATAAAACCAATTCTAATGatcaaactgtattttttttgtcgTCAGCATAAATTGTTAAACACTCTGTCCAGCATCTTTGAATAAGTGTTGGTGCAGAATCGTTTACAGAAGATCTTCCTACAAGTGCTTAACGTCCATCAAGTCAGTGTTAAGATTACGGCCAATATTCAGAGGTCTGGTATcgaaaatggaaaataaataaattgatgcATCTGTAGCTTTCGTTAAGTCGTGAGGATGCCTGACTAGTTCACTTGGTCTCTCAGGGTAccgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgcgtgtgtttttgttttttactttttattttttttacgtGACCATGTTGGTTTTGTATAAATGCTTTTGTAAAATAGGAAGAAGGAACACTGTTTATCGTTTTGTAATAATCTGTTACTAGCTTATAACCAGTCAACAGCCCTGTTGCAATATCTTCGTTTTCTCTCATGCCATACAAAGACGAATCACACCGTCCATCATGTTGTCATGTGTTtattactctttttttaatgttaaataataaatacaatctATAACTTGTAGCTACAAAAGCATCCATCCTGTATGTTTCAGAAACAAGTggaggtgaatttttttt

Function

NR:

description
uncharacterized protein LOC110538631

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916799.2 True 4885 mRNA 0.46 9 3200147 3213935
XM_034309806.1 False 4729 mRNA 0.46 10 3200147 3213935

Neighbor

gene id symbol gene type direction distance location
rusf1 c2h16orf58,cunh16orf58,LOC102793205,LOC107577286 coding downstream 9130 3182985 ~ 3191017 (-)
rpl3 LOC100304518,LOC103392522,LOC108434904,LOC103374755 coding downstream 40884 3154981 ~ 3159263 (-)
LOC113528657 NA coding downstream 43438 3156617 ~ 3156709 (-)
LOC113528655 NA coding downstream 44717 3155296 ~ 3155430 (-)
rpl23 RPL23,rpl23,rl23 coding downstream 127320 3066745 ~ 3072827 (-)
cd2bp2 cd2bp2,LOC107554127 coding upstream 551 3214486 ~ 3218927 (-)
LOC113528532 tbc1d10b,LOC107737756,LOC107554125,LOC107582992 coding upstream 33766 3247701 ~ 3271970 (-)
abcc1 abcc1,LOC107654509 coding upstream 139230 3353165 ~ 3396356 (-)
gspt1l gspt1l,LOC100304847,LOC108438004,LOC107721494,LOC107654506,LOC106529451,LOC104930119 coding upstream 202464 3416399 ~ 3435123 (-)
pdxdc1 pdxdc1 coding upstream 223624 3437559 ~ 3467406 (-)
G204664 NA non-coding downstream 25870 3171262 ~ 3174277 (-)
G204524 NA non-coding downstream 166919 3028815 ~ 3033228 (-)
G204518 NA non-coding downstream 229278 2965883 ~ 2970869 (-)
LOC117598767 NA non-coding downstream 599795 2599709 ~ 2600352 (-)
G204317 NA non-coding downstream 658622 2541126 ~ 2541525 (-)
G205038 NA non-coding upstream 387067 3601002 ~ 3602239 (-)
G205030 NA non-coding upstream 403236 3617171 ~ 3620119 (-)
G205040 dus1l,LOC102781131 non-coding upstream 416759 3630694 ~ 3631383 (-)
G205063 NA non-coding upstream 490348 3704283 ~ 3738959 (-)
G205145 NA non-coding upstream 734914 3948849 ~ 3957710 (-)
si:dkey-283b1.7 LOC108276203,LOC107737768,LOC104929916,LOC106607185 other downstream 122129 3073977 ~ 3078018 (-)
si:dkey-283b1.6 NA other downstream 160495 3034246 ~ 3039652 (-)
LOC113528062 LOC108276032,LOC108276106 other downstream 662036 2433149 ~ 2538111 (-)
LOC113528223 LOC108276032,LOC108261353,LOC108261342 other downstream 855235 2331676 ~ 2344912 (-)
ifi35 ifi35 other downstream 1004607 2112445 ~ 2195540 (-)
nde1 nde1 other upstream 168896 3382831 ~ 3413767 (-)
kcnc3a kcnc3a,LOC108259249,LOC107729449,LOC108427388,LOC107693499,LOC107548332,LOC105891716 other upstream 554920 3768855 ~ 3865849 (-)
G205173 gfap,LOC103392664 other upstream 826546 4040481 ~ 4044575 (-)
dcaf7 dcaf7,LOC100702343,LOC105030232 other upstream 878978 4092913 ~ 4117643 (-)
mlx mlx,LOC107721525,LOC107601295,LOC107720011,LOC107590371,LOC107654516,LOC107688133,LOC106601136 other upstream 1508482 4722417 ~ 4734902 (-)

Expression


Co-expression Network