ube2z (ube2z)


Basic Information

Item Value
gene id ube2z
gene name ube2z
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 9814084 ~ 9827009 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916900.2
attattatttctcctTACTAGAAGGAAGTAAACGACAACAGCTACGAAAAGACTAACCGGAGCTGAGAGCGACGCTGGAGTGCTTAGTTGGAAAGGTGTGGCTTTTCCAATATGTGTTGTAcgtggttttaaattaattgtttGAAAGGTTAGAGTGAGTAATTTATTACACACAGTAACCACAGAGACGGTATGCTTCAGGGAAAAAACGAAACGAAACTCGGGATGATGCCGTAGAAATGGTTTCTGTTTGTGCTGTTGTACAGTAGCGCCAGGTTCCTGAGTGAGGAGAAATTAGAAACTATCGCAGGAAATCGGGTTGAACTGACAGCTCAAAATCCCAGAGACAGAAACAGCAAAACCGAGACACCATGGCGGACGACGCTGGAAAAGAAACCGTGGCGTCCGGTCACGGTAACGGAGCTCAGGTGTTACCGAGTTTAGGTCACTTTTTACCGGCCTCCCCTCCTCCCGCGGTGGCTGCAGAGACCGGCCTGGCCGCAGCGTCCCCCGGCGTAGCGCACCTCATCACCTCGGACATGGAGAGCCAGGAGAGCGGCGTCGTGAACTCGACCGGCTCGGTGATAGCAGCTGTGCCGCCATCTCTGCCGCCGAGCATCGGCCTGGGGCTAACCGGAGCCCCGGCGAATCTGGCTGGAGCGGGTCTTCTGTCTCAGATTCACGCCACGTCCTGGGACCCTACACTGAGCACCGACTGGGACAACGAGAAAGCGTCGCAGCAGTGCATCCTGCGGATAAAGAGAGACATTATGTCCATCTATAAGGAACCTCCTCCTGGTATGTTTGTGGTTCCTGATCCTCATGATATGACCAAGATCCATGCACTAATCACAGGTCCCTTTGACACACCATATGAGGGCggcttcttcctcttcctgttccGTTGCCCTCCTGACTACCCCATTCACCCACCACGTGTCAAACTTATCACCACTGGACACAACACGGTGCGTTTCAACCCCAACTTCTACCGCAACGGCAAAGTTTGCCTTAGCATTCTCGGGACATGGACTGGGCCAGCATGGAGCCCTGCTCAGAGCATCTCCTCAGTCCTCATCTCTATCCAGTCCCTGATGACAGAGAACCCTTACCACAACGAGCCAGGCTTCGAGCAGGAGAGGCACCCAGGAGATAGCAAGAACTACAACGAGTGCATCCGCCATGAGACAATGCGTGTGGCCGTCTGTGATATGTTGGAAGGGAAGGTGCCATGTCCAGAGGCCTTGTGGAGTGTTATGGAAAAGTCTTTCTTGGAGTACTATGACTTCTATGAAGGTGTTTGCAAAGAACGTCTTCACCTACAAGGGCAAAATATGCAGGATCCTTTTGGAGAGAAGAGAGGCCGTTTTGACTACCAGGGTCTCTTGGCGCGTCTCAGTGCCACACAGAGGCGATTGCGGGAAAAATGCCCTCCTGAGGACAATGATGGAGACTCAGATTCTGACACCAGCTCATCTGGAACAGACCCAGACAGCCAGGGCAGCTCGCAGCCGTAGAGTGCCCCCTACGGGCATAGCGAGAGTATGGGAAAGCGATTGTCTTTCCTGCACCTCTGGACGCTTTTTAACAAGCAAAACGCACAGAGCACTGAGAGACATTTGGAGTCTGCTGATATACACAGGATTAGTCTAGTTCCTGTTTCTTTTGATTGGCTTgtttttcctctccttctctgcTAGCCAGTGGTTGCCTCTTTTCTTCGCTGAGAGAGAAATGTCAAGTCAATTGTGGGAATGGGACTAGAAGAttaatgcaagtgtgtgtgtgatgctatATGTGTCAGCAGTTCAGCACACACTCCGCTTATCGGAGCACATATTTACGTGCCCCTCTTATTCTTCACTTCACCTGGTGGTCATGCACACGCTGCAGGTAGAATAAGAGCTACTGCCACCTCAATCCTGAACAGGCCACCATATATTTTAGTGCTCTGGTACCACTCCAGCAATCAGTTTCCTGGTCTTATTTCTGTTTACTTAATGTCTTCACAATAATCTCAGCATTTATTAattgaatcattaaaaaatattttgaatattatgAATGGAGTCATAATTTTGACATGAATTCATAATGAATTGCTTTACCTGatctaagaaaaaaaagctgatgcaactataaaacaaatgtaaatacttAAATATTGTGCAtagaaaatctttattttactgttaattGTGTTATTAAATGCTATTGGAGAGACTTGGTGTGTTGGTATATTTTGGTCAGTAAACTGATCAGCTGTTGATTTGGGCTATGTGTCGTCGTTGGGGAGAGTTGTcctatttgtattttgtttgtacAGTCAAAGGACTTTATTCATGTTGTTTAGCCTGATTAAATATGTTGGTTGAATAAGAACACAAGGGCTCTCcttttttgtataaaatgtgtttgaacTCGCATGTTTTTGAGACATCTAGTCCATATTCTGTTATTACTGATCTAAATGTATACTTTATTGTAAAATCTGAGACTGTCCTTGTTCAGTCATCTGTGGTCTTTTGTCTTGCACTGTACAATATAATCTACTACAAATCTCTGAAGTAGAGAAATTCCTCTAAA

Function

symbol description
ube2z Predicted to enable cysteine-type endopeptidase inhibitor activity and ubiquitin conjugating enzyme activity. Predicted to be involved in negative regulation of apoptotic process. Predicted to act upstream of or within apoptotic process. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human UBE2Z (ubiquitin conjugating enzyme E2 Z).

NR:

description
PREDICTED: ubiquitin-conjugating enzyme E2 Z

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG:

id description
K10585 UBE2Z; ubiquitin-conjugating enzyme E2 Z

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916900.2 True 2586 mRNA 0.46 7 9814084 9827009

Neighbor

gene id symbol gene type direction distance location
atp5mc1 atp5g1,LOC108256653,LOC108413019,LOC107740625,LOC107662391,LOC107585044,LOC107582887 coding upstream 2503 9806798 ~ 9811581 (+)
eve1 LOC108275867,LOC108412315 coding upstream 32162 9779523 ~ 9781922 (+)
nfe2l1a LOC108279857 coding upstream 325543 9477811 ~ 9488541 (+)
si:dkey-110g7.8 LOC108259846 coding upstream 413246 9390424 ~ 9400838 (+)
csf2rb NA coding upstream 501302 9300101 ~ 9312782 (+)
igf2bp1 igf2bp1,LOC108412303,LOC107717213,LOC107667758,LOC107582884,LOC106607494 coding downstream 13881 9840890 ~ 9879885 (+)
si:dkey-225f5.4 LOC108258433 coding downstream 59775 9886784 ~ 9893496 (+)
msl1a msl1 coding downstream 85759 9912768 ~ 9917101 (+)
casc3 casc3 coding downstream 90953 9917962 ~ 9926203 (+)
LOC113528352 snu13,snu13b,LOC103040872,LOC101154660,LOC105910236 coding downstream 365795 10192804 ~ 10195206 (+)
G208472 NA non-coding upstream 66074 9746285 ~ 9748010 (+)
G208415 hoxb9,hoxb9a,LOC107662432,LOC107585091 non-coding upstream 75218 9737009 ~ 9738866 (+)
G208430 NA non-coding upstream 80037 9732608 ~ 9734047 (+)
G208403 NA non-coding upstream 258270 9555612 ~ 9555814 (+)
G208382 NA non-coding upstream 316035 9495015 ~ 9498049 (+)
G208507 NA non-coding downstream 19075 9846084 ~ 9858882 (+)
G208504 NA non-coding downstream 37968 9864977 ~ 9883127 (+)
G208488 col1a1a,LOC108279263,LOC107585052,LOC107740634 non-coding downstream 212400 10039409 ~ 10061965 (+)
G208700 NA non-coding downstream 394274 10221283 ~ 10221539 (+)
G208701 dxo,LOC107752708,LOC107666098,LOC107691245,LOC107743041 non-coding downstream 398574 10225583 ~ 10226503 (+)
nupr1b nupr1,LOC108413333,LOC107660958,LOC107739393,LOC107567154,LOC100692788,LOC103393451 other upstream 750671 9061563 ~ 9063413 (+)
asphd1 asphd1,LOC107568490,LOC107755186,LOC107552472,LOC107739384 other upstream 855984 8950466 ~ 8958100 (+)
trnas-cga_1 NA other upstream 1805673 8008186 ~ 8008411 (+)
G207480 LOC107834952 other upstream 1960575 7853191 ~ 7853509 (+)
spsb3a spsb3,spsb3a,LOC107689049 other upstream 2492119 7309207 ~ 7321965 (+)
rapgefl1 rapgefl1,LOC107717207,LOC107662398,LOC107740631,LOC107667751,LOC107585050,LOC106600822 other downstream 117297 9944306 ~ 9987773 (+)
G208781 cacng4b,LOC108259704,LOC106606650,LOC107565862,LOC107691234,LOC106601773,LOC107724746,LOC107713946 other downstream 522393 10349402 ~ 10781459 (+)
cdc42ep4a LOC108256079,LOC108432235,LOC103033379 other downstream 1453071 11280080 ~ 11388020 (+)
luc7l3 luc7l3,LOC107674472,LOC107726809,LOC107654661 other downstream 1740110 11567119 ~ 11577823 (+)
tbc1d16 tbc1d16,LOC107559246,LOC107689993,LOC107670685,LOC107562324 other downstream 2222398 12049407 ~ 12086058 (+)

Expression


Co-expression Network