drc3 (drc3)


Basic Information

Item Value
gene id drc3
gene name drc3
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 10899639 ~ 10909807 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916957.2
CCCTAGAAATATGTTCTGTTGCTACGCAACAGCTGGTCTAACGCCTAGACGCGAATTCCTATGTAAATAGAAACCAAATAGCATTGTCAAAATGAGCAGACTATATGATATAAAAGAATCCAGTGTAATTGATGAGGAAATGCTGCAAAAGGCAGTCGAGGAGCAGGGACCTCAAGAGCAGGCTGGACTTATAGCCAAAGCAGAGGGCTTAAAGTACGACAAAGTGACTCAACTGTGCCTGGACTACAGAAACATCTTAAAGATAGACCATCTATGGCAGTTCACGTCTCTAACCAAGCTTCAACTTGACAATAATATCATTGAGAAGATTCAAGGATTAGAAAAGCTCACTAACCTGGTATGGCTTGACTTGTCCTTCAATAACATTGAGGTGATTGAAGGGTTGGATACACTCGTGAAACTTCAGGACCTGAGTTTGTTCAACAATCGCATTTCTGTAATAGAGAACATGGATGCACTGCAAAACCTGCATATCGTCTCACTTGGTAACAATTTAATCTCGCAGCTTGACAATGTAATATACTTAAGAAAGTTTCAGAACCTGCGCACACTTGACCTTTCTGGAAATCCAGTCTGCAAAGACGAAAACTACAAATTTTTTGTGGCTGCGTACCTGTCAGACCTGGTTTACCTCGACTACAGGCTACTAGATGAACAAACTCGAGAAAAGGCACAGTACCAGTATCAGAGTGCAATTGAGAAGATAAAACACAATGAACTGCAGGAGCAAAAGGCAACAGAGGCTCAGAAAAATAAGGAACAAGATCTTCAGCTGCATAAGGATGCATTTGTGGAATATTTGAACGGGCCTCATCTATTTGACAGCATGTTTGCGGATGATGTTGAGGCGTCTAAGTTGGCACACCTTCCTGAAGTTGCTACACTACTGGAATCATACCGGACACAGTTGGAGGCATTATGTATGCAGATTTTTGAAGCAGGTttaacacagcacacacaaagGCAGAATGAGGTAGAATGCTTCTTCACTTGTTTCCAAAAGGCCATGGCTGACAATCAGCAGAGAGGAGCTCAAATAGTGGCTGACTTTGAGAGAGCCAGGAGAcagGTGATGGCTGAGATGCAGCAGGCAGCAGACCACAGTTTGTTAAAGGTCAGAGTCAGAAATGAGATCATGCAGATTCGTGACACTCTCCTGACTCTGGAGCTGCAACTAGTGGCACAGTTAGAGGACATCATTAAAGACTTTGAGAGAAACATCACAGACATGGTTGGAGGGTTTGCCGAATATGTGCAAAGCATATTTGCTCAGTGTCGAGATCTGGAGAACCACCATCATGAGAAAGTGCTCGACATTGCTGTGGCAACACTGGACAGAGTGGCTAAGAATGAGCTGGAGGAGGACTTGCCTGATGACGTGCACTTGCTCTTTGTGGACAAAGACACGATGATCAGCACAGTCAACGCGTCACATGACATGCACCTGCTGAAGATTGACAACAGAGAAGATGAGCTCTTGACACAGCTCAACGGCTGGAAGAGTGCACTAATGAAGTCGATACATGATGACGAGGTTAAAAGGAATCGCAAACGCATCTCAGAAATCCATAAATATGTTGATTATACTTGGGACCAGCTGGAGGAGACACTGTTGCCTGATTTCCAGTAGCAGGAGCAGAGCAGGACTGGGGCAAAAAATCAGGCTGGGAGTCTCACACCCACCCAGGCCAATGCATTTTGAGACCACGGACCACCTACTGTACACTCACTAACCAGTTTCTTAGGAACctctgtacatctgctcattcatgcaaatatctaatcagccaatcatgaggcagcagctcaatgcagaaaatcatgtaGGCATGGGCCATCATTACATAGTGTTAGGTACGTGTTTGCAGATCAAACTGACCTGCACTTGAAGTTACTTAAAAGTGTCtgttatttctattattattattgttattattattattaaatgtctcTTGGAGGACTTTACGTTTTCGtgtctttttcctctctgctcCATCTGAATGCTACTTG
>XM_034310142.1
AAAAACGTGTGGGATGTTGCTGCAGATGAATTCTGGAAAGCAgcccaaaaatgacaaaaaatctGGGTTTGAACAAAACATTGTCAAAATGAGCAGACTATATGATATAAAAGAATCCAGTGTAATTGATGAGGAAATGCTGCAAAAGGCAGTCGAGGAGCAGGGACCTCAAGAGCAGGCTGGACTTATAGCCAAAGCAGAGGGCTTAAAGTACGACAAAGTGACTCAACTGTGCCTGGACTACAGAAACATCTTAAAGATAGACCATCTATGGCAGTTCACGTCTCTAACCAAGCTTCAACTTGACAATAATATCATTGAGAAGATTCAAGGATTAGAAAAGCTCACTAACCTGGTATGGCTTGACTTGTCCTTCAATAACATTGAGGTGATTGAAGGGTTGGATACACTCGTGAAACTTCAGGACCTGAGTTTGTTCAACAATCGCATTTCTGTAATAGAGAACATGGATGCACTGCAAAACCTGCATATCGTCTCACTTGGTAACAATTTAATCTCGCAGCTTGACAATGTAATATACTTAAGAAAGTTTCAGAACCTGCGCACACTTGACCTTTCTGGAAATCCAGTCTGCAAAGACGAAAACTACAAATTTTTTGTGGCTGCGTACCTGTCAGACCTGGTTTACCTCGACTACAGGCTACTAGATGAACAAACTCGAGAAAAGGCACAGTACCAGTATCAGAGTGCAATTGAGAAGATAAAACACAATGAACTGCAGGAGCAAAAGGCAACAGAGGCTCAGAAAAATAAGGAACAAGATCTTCAGCTGCATAAGGATGCATTTGTGGAATATTTGAACGGGCCTCATCTATTTGACAGCATGTTTGCGGATGATGTTGAGGCGTCTAAGTTGGCACACCTTCCTGAAGTTGCTACACTACTGGAATCATACCGGACACAGTTGGAGGCATTATGTATGCAGATTTTTGAAGCAGGTttaacacagcacacacaaagGCAGAATGAGGTAGAATGCTTCTTCACTTGTTTCCAAAAGGCCATGGCTGACAATCAGCAGAGAGGAGCTCAAATAGTGGCTGACTTTGAGAGAGCCAGGAGAcagGTGATGGCTGAGATGCAGCAGGCAGCAGACCACAGTTTGTTAAAGGTCAGAGTCAGAAATGAGATCATGCAGATTCGTGACACTCTCCTGACTCTGGAGCTGCAACTAGTGGCACAGTTAGAGGACATCATTAAAGACTTTGAGAGAAACATCACAGACATGGTTGGAGGGTTTGCCGAATATGTGCAAAGCATATTTGCTCAGTGTCGAGATCTGGAGAACCACCATCATGAGAAAGTGCTCGACATTGCTGTGGCAACACTGGACAGAGTGGCTAAGAATGAGCTGGAGGAGGACTTGCCTGATGACGTGCACTTGCTCTTTGTGGACAAAGACACGATGATCAGCACAGTCAACGCGTCACATGACATGCACCTGCTGAAGATTGACAACAGAGAAGATGAGCTCTTGACACAGCTCAACGGCTGGAAGAGTGCACTAATGAAGTCGATACATGATGACGAGGTTAAAAGGAATCGCAAACGCATCTCAGAAATCCATAAATATGTTGATTATACTTGGGACCAGCTGGAGGAGACACTGTTGCCTGATTTCCAGTAGCAGGAGCAGAGCAGGACTGGGGCAAAAAATCAGGCTGGGAGTCTCACACCCACCCAGGCCAATGCATTTTGAGACCACGGACCACCTACTGTACACTCACTAACCAGTTTCTTAGGAACctctgtacatctgctcattcatgcaaatatctaatcagccaatcatgaggcagcagctcaatgcagaaaatcatgtaGGCATGGGCCATCATTACATAGTGTTAGGTACGTGTTTGCAGATCAAACTGACCTGCACTTGAAGTTACTTAAAAGTGTCtgttatttctattattattattgttattattattattaaatgtctcTTGGAGGACTTTACGTTTTCGtgtctttttcctctctgctcCATCTGAATGCTACTTGTC

Function

symbol description
drc3 Orthologous to human DRC3 (dynein regulatory complex subunit 3).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916957.2 True 2031 mRNA 0.44 13 10899639 10909805
XM_034310142.1 False 2030 mRNA 0.43 13 10901036 10909807

Neighbor

gene id symbol gene type direction distance location
LOC113528286 rai1 coding upstream 53055 10809454 ~ 10846584 (+)
fam20ca LOC108274115,LOC108412745,LOC107713951,LOC107584184 coding upstream 101461 10748146 ~ 10798178 (+)
bri3 bri3 coding upstream 415433 10475354 ~ 10484206 (+)
lmtk2 lmtk2 coding upstream 450954 10426059 ~ 10448685 (+)
helz helz,LOC107691233,LOC107665819 coding upstream 557924 10298887 ~ 10341715 (+)
gid4 gid4,LOC107724729,LOC107555661,LOC106601817,LOC107559524 coding downstream 1650 10911457 ~ 10919978 (+)
noxo1a LOC108261250 coding downstream 27496 10937303 ~ 10940999 (+)
LOC113527977 LOC108258077,LOC106964020,LOC103155899,LOC107091756,LOC101062683,LOC105938884 coding downstream 53168 10962975 ~ 10966262 (+)
gas7a gas7,gas7a,LOC108260882,LOC108412615,LOC107583758 coding downstream 75050 10984857 ~ 11006021 (+)
aatka LOC108277323 coding downstream 121226 11031033 ~ 11072825 (+)
G208916 NA non-coding upstream 42624 10855155 ~ 10857015 (+)
G208911 NA non-coding upstream 70726 10827025 ~ 10828913 (+)
G208783 NA non-coding upstream 557415 10341908 ~ 10342224 (+)
G208701 dxo,LOC107752708,LOC107666098,LOC107691245,LOC107743041 non-coding upstream 673136 10225583 ~ 10226503 (+)
G208700 NA non-coding upstream 678100 10221283 ~ 10221539 (+)
G209067 NA non-coding downstream 22252 10932059 ~ 10932428 (+)
G209069 tbl3,LOC107724722,LOC106601810 non-coding downstream 33448 10943255 ~ 10947541 (+)
LOC117598771 NA non-coding downstream 61914 10971721 ~ 10982293 (+)
G209390 NA non-coding downstream 708228 11618035 ~ 11618234 (+)
G209392 NA non-coding downstream 724105 11633912 ~ 11634481 (+)
G208781 cacng4b,LOC108259704,LOC106606650,LOC107565862,LOC107691234,LOC106601773,LOC107724746,LOC107713946 other upstream 118180 10349402 ~ 10781459 (+)
rapgefl1 rapgefl1,LOC107717207,LOC107662398,LOC107740631,LOC107667751,LOC107585050,LOC106600822 other upstream 911866 9944306 ~ 9987773 (+)
nupr1b nupr1,LOC108413333,LOC107660958,LOC107739393,LOC107567154,LOC100692788,LOC103393451 other upstream 1836226 9061563 ~ 9063413 (+)
asphd1 asphd1,LOC107568490,LOC107755186,LOC107552472,LOC107739384 other upstream 1941539 8950466 ~ 8958100 (+)
trnas-cga_1 NA other upstream 2891228 8008186 ~ 8008411 (+)
cdc42ep4a LOC108256079,LOC108432235,LOC103033379 other downstream 370273 11280080 ~ 11388020 (+)
luc7l3 luc7l3,LOC107674472,LOC107726809,LOC107654661 other downstream 657312 11567119 ~ 11577823 (+)
tbc1d16 tbc1d16,LOC107559246,LOC107689993,LOC107670685,LOC107562324 other downstream 1139600 12049407 ~ 12086058 (+)
LOC113528416 LOC108275780 other downstream 1225462 12135269 ~ 12140371 (+)
arhgap17b LOC108279379,LOC108432202 other downstream 1248896 12158703 ~ 12190070 (+)

Expression


Co-expression Network