cyth1a (cyth1,cyth1a,LOC106920077,LOC108277039,LOC107552117,LOC103392816,LOC104925066)


Basic Information

Item Value
gene id cyth1a
gene name cyth1,cyth1a,LOC106920077,LOC108277039,LOC107552117,LOC103392816,LOC104925066
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 14534573 ~ 14601007 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026917129.2
gagagggagagagagagagagagagagagggaaaacacagaagcaGAGGCGGAGGCAGAAAGAGCGCTGAGTTTAAGACCCTATGCACATAGAGAGGAAGGCTGTGATTGCATGATCGCAGAAAACTGATGCAGAGAGACGTACTAGGATTACcccacactctctgtctcatttcttTCACTCACACTTGGACAAGAggacgttaaaaaaaaaaagccttatgGAGAAGGAAGTAGCTTTGAGTAACCTTGGAGTAACCTGCTGAAAGTCCGCGACAATGGCCACTGAACtgactgtcacacacacttatcttcTGACAGTGTGAAAttggagaagagaaagaggacgTAACAGGAGAGGCGAGAGTGAGGACAAATTTAGTGTTTCGGAAAAAAATTAAACGCTTTCATAGAGCAAAGTAATGGGGACAGTGAGTGAACTGTGTGTGTCCAGCCTTCAGGCTTTCATGTGTCCACCAGTGCCGATCCCATGTCCAGTGCCAGACGACCTCACGCCCGAGGAGCAGCAGGAGCTGGAGAACATCCGGCGACGCAAgcaggagctgctggaggacATTCAGCGTTTGAAGGATGAGATAGCCGAGGTGACCAGCGAGATCGAGAACCTGGGCTCCACTGAGGAGAGGAAAAACATGCAGAGGAACAAGCAGGTGGCAATGGGCCGCAAGAAGTTCAACATGGACCCTAAGAAGGGGATTCAGTTCCTGATTGAAAATGATCTTCTGAAGAACACCAGCGATGACATCGCTCAGTTCCTGTACAAGGGCGAGGGCCTGAATAAGACAGCAATAGGGGACTACCTCGGAGAGAGGGATGAGTTCAACATCCAGGTGCTGCACGCGTTTGTGGAGTTGCACGAGTTCACAGATCTGAACCTTGTTCAAGCGCTCAGGCAATTTCTTTGGAGCTTCAGACTGCCAGGCGAGGCACAGAAGATCGATAGGATGATGGAGGCTTTTGCCCAGCGCTACTGCCAATGCAACCCGGGAGTCTTCCAGTCCACTGACACGTGCTACATCCTTTCCTTCGCCATCATCATGCTGAACACCAGCCTTCACAACCCCAACGTGAAAGACAAGCCCACTGTGGAGCGCTTCATCTCCATGAACAGAGGCATCAATGACGGCGGAGACCTACCAGAGGAGCTGCTACGAAACCTGTACGAGAGCATCAAGAACGAGCCGTTCAAAATCCCAGAGGACGACGGCAacgacctcacacacacattcttcaacCCTGACCGGGAGGGCTGGCTGCTCAAACTGGGTGGACGTGTCAAAACCTGGAAGAGACGATGGTTCATTCTCACAGACAACTGCCTTTACTACTTTGAGTACACTACAGacaaagaacccagaggaatcATTCCTTTGGAAAACCTGAGCATCCGAGAAGTGGAGGACAAGAAGCCGAACTGCTTCGAGCTCTTCATACCGGACAATAAGGATCAGGTGATTAAGGCGTGTAAGACGGAGGCGGATGGGCGCGTGGTGGAGGGCAATCACACATTCTACCGCATCTCCGCTCCCACCACTGAGGAGAAGGACGAGTGGATCAACAGCATCAAGGCGGCGATCAGCAGGGACCCGTTCTACGAGATGCTGGCTGCCAGGAAGAAGAAAGTCTCCTCTATGAAGAGGCACTAAACCTGCTCAGGGCGATTCAGGGCTGTGTGAGTGCTCCCTCTAGTGGAGAGAACTGACACCTTGACTGGGAGGATGAGACTGGTCTCCTTCCCACTGCCTACCCCCTTTCAATAACGTAGTGTCTTTACTGGGACAGAATGGGGTTTGAGGACTAAATAGGACGTTGGAGATTGAAAAAAGCCAGGATTAGGCTCTTTAGTGCCCAGCAGGAACTGTGCCTCTGCTCCTCTTCCTGTTTAAATGTCCCTCACCTCTCCTTCacctcagtgtctgtgtgtgtgtgtgtgtgtggatacgtgtgtgcatgtgtgaaggGCATTCTGTTTCAGGCTCTTCTCTTGAAAATCCCCAAAGAATCAATCTCAGTCCTAATGCTAAACCAAAATGCACACTTTCTCTACCCTGTTTCTTTCTTATCTAGATTCTATCTATCCTGATCCTTgatctttcatttctctctctgtctctctttctccctctatctatctatctatctatctagctcgCTCTCTCTTTTAAACATGTCTTaaacgtacacacacacacacacacacacacacacgttctcgTTTAATCAGCAGGTCTGACAGAATGTGGGTTACCAAAAAAAGGCCTCTCCTTGATTTCAAAACAGGAAAGACCTTCTTGTATGCTTTTTTTCGTTATGTACAGGCAATAAgtgtattttttacatttctatatCCTCTGTatattctctttcttctctcgtCAATTTGACAAATGTCACTGTAAAGCACCACATGGCTTTCATGAGAACTGGAAGAGGCGGTGTTTAGTGTACACAATGTAGGATGGGAGGCAGATTTGCTCATACACTCTCAGGCCAAAAGCaggtggacacatgaccatcacacccatatgtgattcatccccaaactcttgccacaaagttgtaagcacacaatcgtctttgtatgctgtatcaTTAAGAtctcacttcactggaactaaggagcctaAACCTGTTCCGGCATGACAGTACCCCCTGGGCATGCCGACTAACCGGCAGGCCTTCTCGCTCATCATCAGTCCCCTTGCTCTTGTATCTGAATGCTCCAGCTCCAAATGAATGCCCATagatctggaatgggatgttcaacaaacacatatgggtgtgaaggtgtccacatacttttggccatatggtgtatgtcAAGATAAGGATGCTGGtgtaggttttgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtgtgtgggcTCCTCCAGCTTCCTGTATGCTAAAAGGCCGAACTGTTCTAGAAATAGCCCCTTTTTACCTGCCCTGACAAGAGCGCATGCTTTAACTTCACGCTTTCCTTTCTATTTCCTTCTTTACAATTTTACCAAGCTAGCAGTTTCCATTCTTTGAGCAAAGTCGTACATCTGAGCAGTATTGGTTTATTTATCAAGGATGTATATACTTCAGTGTATAGTGAGTATCtttctgcattttatataaatatgtgtgtgtagcaaATACATTGTTAGCTGAGTgccattttttccatttttttttttttttttttttttttttgttcctcttgAAAATGTACCTTTGGCCTCACAGATGTGTGTGAGCTCAGCCATTTTtggtaaaaaacaaaattacaaaataaaatctaaacacCAAA
>XM_026917130.2
CTGTTACACCCGACACCACACTTCCTCATTTTTTacccacagcagcagcagctagACGCACAGACACAGGTTTATCCGAGTACTGAATATATGAAATATcggcttttattattattataattattatttttgtttaaaaaaggttAAGAGCTGAAGCCACTCTTTGGCACGCGGTCGGAAATCCTTCAGCAGCTGCTCATCCGGAGTCGTGTGTGTTATCTAAACGCGGGTTGTTTTTCTGGGGTTTAAAAGTTTTGCACACGTGAAAACCGAGTTCTTGTTTACCGGGTTGTGAGTGtttacaaacaacaacaacaacaacaataagaagaagaagaagctacCAAAGAAGACGCCATGGTGCTGAAATCAGAGGACGGCGTCGTGCCAGACGACCTCACGCCCGAGGAGCAGCAGGAGCTGGAGAACATCCGGCGACGCAAgcaggagctgctggaggacATTCAGCGTTTGAAGGATGAGATAGCCGAGGTGACCAGCGAGATCGAGAACCTGGGCTCCACTGAGGAGAGGAAAAACATGCAGAGGAACAAGCAGGTGGCAATGGGCCGCAAGAAGTTCAACATGGACCCTAAGAAGGGGATTCAGTTCCTGATTGAAAATGATCTTCTGAAGAACACCAGCGATGACATCGCTCAGTTCCTGTACAAGGGCGAGGGCCTGAATAAGACAGCAATAGGGGACTACCTCGGAGAGAGGGATGAGTTCAACATCCAGGTGCTGCACGCGTTTGTGGAGTTGCACGAGTTCACAGATCTGAACCTTGTTCAAGCGCTCAGGCAATTTCTTTGGAGCTTCAGACTGCCAGGCGAGGCACAGAAGATCGATAGGATGATGGAGGCTTTTGCCCAGCGCTACTGCCAATGCAACCCGGGAGTCTTCCAGTCCACTGACACGTGCTACATCCTTTCCTTCGCCATCATCATGCTGAACACCAGCCTTCACAACCCCAACGTGAAAGACAAGCCCACTGTGGAGCGCTTCATCTCCATGAACAGAGGCATCAATGACGGCGGAGACCTACCAGAGGAGCTGCTACGAAACCTGTACGAGAGCATCAAGAACGAGCCGTTCAAAATCCCAGAGGACGACGGCAacgacctcacacacacattcttcaacCCTGACCGGGAGGGCTGGCTGCTCAAACTGGGAGGTGGACGTGTCAAAACCTGGAAGAGACGATGGTTCATTCTCACAGACAACTGCCTTTACTACTTTGAGTACACTACAGacaaagaacccagaggaatcATTCCTTTGGAAAACCTGAGCATCCGAGAAGTGGAGGACAAGAAGCCGAACTGCTTCGAGCTCTTCATACCGGACAATAAGGATCAGGTGATTAAGGCGTGTAAGACGGAGGCGGATGGGCGCGTGGTGGAGGGCAATCACACATTCTACCGCATCTCCGCTCCCACCACTGAGGAGAAGGACGAGTGGATCAACAGCATCAAGGCGGCGATCAGCAGGGACCCGTTCTACGAGATGCTGGCTGCCAGGAAGAAGAAAGTCTCCTCTATGAAGAGGCACTAAACCTGCTCAGGGCGATTCAGGGCTGTGTGAGTGCTCCCTCTAGTGGAGAGAACTGACACCTTGACTGGGAGGATGAGACTGGTCTCCTTCCCACTGCCTACCCCCTTTCAATAACGTAGTGTCTTTACTGGGACAGAATGGGGTTTGAGGACTAAATAGGACGTTGGAGATTGAAAAAAGCCAGGATTAGGCTCTTTAGTGCCCAGCAGGAACTGTGCCTCTGCTCCTCTTCCTGTTTAAATGTCCCTCACCTCTCCTTCacctcagtgtctgtgtgtgtgtgtgtgtgtggatacgtgtgtgcatgtgtgaaggGCATTCTGTTTCAGGCTCTTCTCTTGAAAATCCCCAAAGAATCAATCTCAGTCCTAATGCTAAACCAAAATGCACACTTTCTCTACCCTGTTTCTTTCTTATCTAGATTCTATCTATCCTGATCCTTgatctttcatttctctctctgtctctctttctccctctatctatctatctatctatctagctcgCTCTCTCTTTTAAACATGTCTTaaacgtacacacacacacacacacacacacacacgttctcgTTTAATCAGCAGGTCTGACAGAATGTGGGTTACCAAAAAAAGGCCTCTCCTTGATTTCAAAACAGGAAAGACCTTCTTGTATGCTTTTTTTCGTTATGTACAGGCAATAAgtgtattttttacatttctatatCCTCTGTatattctctttcttctctcgtCAATTTGACAAATGTCACTGTAAAGCACCACATGGCTTTCATGAGAACTGGAAGAGGCGGTGTTTAGTGTACACAATGTAGGATGGGAGGCAGATTTGCTCATACACTCTCAGGCCAAAAGCaggtggacacatgaccatcacacccatatgtgattcatccccaaactcttgccacaaagttgtaagcacacaatcgtctttgtatgctgtatcaTTAAGAtctcacttcactggaactaaggagcctaAACCTGTTCCGGCATGACAGTACCCCCTGGGCATGCCGACTAACCGGCAGGCCTTCTCGCTCATCATCAGTCCCCTTGCTCTTGTATCTGAATGCTCCAGCTCCAAATGAATGCCCATagatctggaatgggatgttcaacaaacacatatgggtgtgaaggtgtccacatacttttggccatatggtgtatgtcAAGATAAGGATGCTGGtgtaggttttgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtgtgtgggcTCCTCCAGCTTCCTGTATGCTAAAAGGCCGAACTGTTCTAGAAATAGCCCCTTTTTACCTGCCCTGACAAGAGCGCATGCTTTAACTTCACGCTTTCCTTTCTATTTCCTTCTTTACAATTTTACCAAGCTAGCAGTTTCCATTCTTTGAGCAAAGTCGTACATCTGAGCAGTATTGGTTTATTTATCAAGGATGTATATACTTCAGTGTATAGTGAGTATCtttctgcattttatataaatatgtgtgtgtagcaaATACATTGTTAGCTGAGTgccattttttccatttttttttttttttttttttttttttgttcctcttgAAAATGTACCTTTGGCCTCACAGATGTGTGTGAGCTCAGCCATTTTtggtaaaaaacaaaattacaaaataaaatctaaacacCAAA
>XM_026917131.2
gagagagagagagagagagagagattgagagagagagggcactCATTGGAGATCAGCACTGCGCCAGCAGCGCCTCCCACTCTGCCAGTGTCCCAGTCTCCCACAGCCGGCATGGAGGCGGAAAGCCACGTGCCAGACGACCTCACGCCCGAGGAGCAGCAGGAGCTGGAGAACATCCGGCGACGCAAgcaggagctgctggaggacATTCAGCGTTTGAAGGATGAGATAGCCGAGGTGACCAGCGAGATCGAGAACCTGGGCTCCACTGAGGAGAGGAAAAACATGCAGAGGAACAAGCAGGTGGCAATGGGCCGCAAGAAGTTCAACATGGACCCTAAGAAGGGGATTCAGTTCCTGATTGAAAATGATCTTCTGAAGAACACCAGCGATGACATCGCTCAGTTCCTGTACAAGGGCGAGGGCCTGAATAAGACAGCAATAGGGGACTACCTCGGAGAGAGGGATGAGTTCAACATCCAGGTGCTGCACGCGTTTGTGGAGTTGCACGAGTTCACAGATCTGAACCTTGTTCAAGCGCTCAGGCAATTTCTTTGGAGCTTCAGACTGCCAGGCGAGGCACAGAAGATCGATAGGATGATGGAGGCTTTTGCCCAGCGCTACTGCCAATGCAACCCGGGAGTCTTCCAGTCCACTGACACGTGCTACATCCTTTCCTTCGCCATCATCATGCTGAACACCAGCCTTCACAACCCCAACGTGAAAGACAAGCCCACTGTGGAGCGCTTCATCTCCATGAACAGAGGCATCAATGACGGCGGAGACCTACCAGAGGAGCTGCTACGAAACCTGTACGAGAGCATCAAGAACGAGCCGTTCAAAATCCCAGAGGACGACGGCAacgacctcacacacacattcttcaacCCTGACCGGGAGGGCTGGCTGCTCAAACTGGGAGGTGGACGTGTCAAAACCTGGAAGAGACGATGGTTCATTCTCACAGACAACTGCCTTTACTACTTTGAGTACACTACAGacaaagaacccagaggaatcATTCCTTTGGAAAACCTGAGCATCCGAGAAGTGGAGGACAAGAAGCCGAACTGCTTCGAGCTCTTCATACCGGACAATAAGGATCAGGTGATTAAGGCGTGTAAGACGGAGGCGGATGGGCGCGTGGTGGAGGGCAATCACACATTCTACCGCATCTCCGCTCCCACCACTGAGGAGAAGGACGAGTGGATCAACAGCATCAAGGCGGCGATCAGCAGGGACCCGTTCTACGAGATGCTGGCTGCCAGGAAGAAGAAAGTCTCCTCTATGAAGAGGCACTAAACCTGCTCAGGGCGATTCAGGGCTGTGTGAGTGCTCCCTCTAGTGGAGAGAACTGACACCTTGACTGGGAGGATGAGACTGGTCTCCTTCCCACTGCCTACCCCCTTTCAATAACGTAGTGTCTTTACTGGGACAGAATGGGGTTTGAGGACTAAATAGGACGTTGGAGATTGAAAAAAGCCAGGATTAGGCTCTTTAGTGCCCAGCAGGAACTGTGCCTCTGCTCCTCTTCCTGTTTAAATGTCCCTCACCTCTCCTTCacctcagtgtctgtgtgtgtgtgtgtgtgtggatacgtgtgtgcatgtgtgaaggGCATTCTGTTTCAGGCTCTTCTCTTGAAAATCCCCAAAGAATCAATCTCAGTCCTAATGCTAAACCAAAATGCACACTTTCTCTACCCTGTTTCTTTCTTATCTAGATTCTATCTATCCTGATCCTTgatctttcatttctctctctgtctctctttctccctctatctatctatctatctatctagctcgCTCTCTCTTTTAAACATGTCTTaaacgtacacacacacacacacacacacacacacgttctcgTTTAATCAGCAGGTCTGACAGAATGTGGGTTACCAAAAAAAGGCCTCTCCTTGATTTCAAAACAGGAAAGACCTTCTTGTATGCTTTTTTTCGTTATGTACAGGCAATAAgtgtattttttacatttctatatCCTCTGTatattctctttcttctctcgtCAATTTGACAAATGTCACTGTAAAGCACCACATGGCTTTCATGAGAACTGGAAGAGGCGGTGTTTAGTGTACACAATGTAGGATGGGAGGCAGATTTGCTCATACACTCTCAGGCCAAAAGCaggtggacacatgaccatcacacccatatgtgattcatccccaaactcttgccacaaagttgtaagcacacaatcgtctttgtatgctgtatcaTTAAGAtctcacttcactggaactaaggagcctaAACCTGTTCCGGCATGACAGTACCCCCTGGGCATGCCGACTAACCGGCAGGCCTTCTCGCTCATCATCAGTCCCCTTGCTCTTGTATCTGAATGCTCCAGCTCCAAATGAATGCCCATagatctggaatgggatgttcaacaaacacatatgggtgtgaaggtgtccacatacttttggccatatggtgtatgtcAAGATAAGGATGCTGGtgtaggttttgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtgtgtgggcTCCTCCAGCTTCCTGTATGCTAAAAGGCCGAACTGTTCTAGAAATAGCCCCTTTTTACCTGCCCTGACAAGAGCGCATGCTTTAACTTCACGCTTTCCTTTCTATTTCCTTCTTTACAATTTTACCAAGCTAGCAGTTTCCATTCTTTGAGCAAAGTCGTACATCTGAGCAGTATTGGTTTATTTATCAAGGATGTATATACTTCAGTGTATAGTGAGTATCtttctgcattttatataaatatgtgtgtgtagcaaATACATTGTTAGCTGAGTgccattttttccatttttttttttttttttttttttttttgttcctcttgAAAATGTACCTTTGGCCTCACAGATGTGTGTGAGCTCAGCCATTTTtggtaaaaaacaaaattacaaaataaaatctaaacacCAAA
>XM_026917132.2
GATACAAGCTTCACTCTCTGTtcctctcgctttctctctctttattaaCATCATTTCTGGACCAAGACTGTTACTGAAGGATCTTTTTCACTGCTGCTGGACCATTGTCTCTGGACTATTTAAGGGATGTATCTGTTATACAGTTATTCTTCTCATCACTCACCAGAATAGAACAGTAATTTAAGAAGTACACCAAGATTGACTGAAGAAGCAAAATTCTTCTCAGGATTAGACAAAACAGTGCCAGACGACCTCACGCCCGAGGAGCAGCAGGAGCTGGAGAACATCCGGCGACGCAAgcaggagctgctggaggacATTCAGCGTTTGAAGGATGAGATAGCCGAGGTGACCAGCGAGATCGAGAACCTGGGCTCCACTGAGGAGAGGAAAAACATGCAGAGGAACAAGCAGGTGGCAATGGGCCGCAAGAAGTTCAACATGGACCCTAAGAAGGGGATTCAGTTCCTGATTGAAAATGATCTTCTGAAGAACACCAGCGATGACATCGCTCAGTTCCTGTACAAGGGCGAGGGCCTGAATAAGACAGCAATAGGGGACTACCTCGGAGAGAGGGATGAGTTCAACATCCAGGTGCTGCACGCGTTTGTGGAGTTGCACGAGTTCACAGATCTGAACCTTGTTCAAGCGCTCAGGCAATTTCTTTGGAGCTTCAGACTGCCAGGCGAGGCACAGAAGATCGATAGGATGATGGAGGCTTTTGCCCAGCGCTACTGCCAATGCAACCCGGGAGTCTTCCAGTCCACTGACACGTGCTACATCCTTTCCTTCGCCATCATCATGCTGAACACCAGCCTTCACAACCCCAACGTGAAAGACAAGCCCACTGTGGAGCGCTTCATCTCCATGAACAGAGGCATCAATGACGGCGGAGACCTACCAGAGGAGCTGCTACGAAACCTGTACGAGAGCATCAAGAACGAGCCGTTCAAAATCCCAGAGGACGACGGCAacgacctcacacacacattcttcaacCCTGACCGGGAGGGCTGGCTGCTCAAACTGGGAGGTGGACGTGTCAAAACCTGGAAGAGACGATGGTTCATTCTCACAGACAACTGCCTTTACTACTTTGAGTACACTACAGacaaagaacccagaggaatcATTCCTTTGGAAAACCTGAGCATCCGAGAAGTGGAGGACAAGAAGCCGAACTGCTTCGAGCTCTTCATACCGGACAATAAGGATCAGGTGATTAAGGCGTGTAAGACGGAGGCGGATGGGCGCGTGGTGGAGGGCAATCACACATTCTACCGCATCTCCGCTCCCACCACTGAGGAGAAGGACGAGTGGATCAACAGCATCAAGGCGGCGATCAGCAGGGACCCGTTCTACGAGATGCTGGCTGCCAGGAAGAAGAAAGTCTCCTCTATGAAGAGGCACTAAACCTGCTCAGGGCGATTCAGGGCTGTGTGAGTGCTCCCTCTAGTGGAGAGAACTGACACCTTGACTGGGAGGATGAGACTGGTCTCCTTCCCACTGCCTACCCCCTTTCAATAACGTAGTGTCTTTACTGGGACAGAATGGGGTTTGAGGACTAAATAGGACGTTGGAGATTGAAAAAAGCCAGGATTAGGCTCTTTAGTGCCCAGCAGGAACTGTGCCTCTGCTCCTCTTCCTGTTTAAATGTCCCTCACCTCTCCTTCacctcagtgtctgtgtgtgtgtgtgtgtgtggatacgtgtgtgcatgtgtgaaggGCATTCTGTTTCAGGCTCTTCTCTTGAAAATCCCCAAAGAATCAATCTCAGTCCTAATGCTAAACCAAAATGCACACTTTCTCTACCCTGTTTCTTTCTTATCTAGATTCTATCTATCCTGATCCTTgatctttcatttctctctctgtctctctttctccctctatctatctatctatctatctagctcgCTCTCTCTTTTAAACATGTCTTaaacgtacacacacacacacacacacacacacacgttctcgTTTAATCAGCAGGTCTGACAGAATGTGGGTTACCAAAAAAAGGCCTCTCCTTGATTTCAAAACAGGAAAGACCTTCTTGTATGCTTTTTTTCGTTATGTACAGGCAATAAgtgtattttttacatttctatatCCTCTGTatattctctttcttctctcgtCAATTTGACAAATGTCACTGTAAAGCACCACATGGCTTTCATGAGAACTGGAAGAGGCGGTGTTTAGTGTACACAATGTAGGATGGGAGGCAGATTTGCTCATACACTCTCAGGCCAAAAGCaggtggacacatgaccatcacacccatatgtgattcatccccaaactcttgccacaaagttgtaagcacacaatcgtctttgtatgctgtatcaTTAAGAtctcacttcactggaactaaggagcctaAACCTGTTCCGGCATGACAGTACCCCCTGGGCATGCCGACTAACCGGCAGGCCTTCTCGCTCATCATCAGTCCCCTTGCTCTTGTATCTGAATGCTCCAGCTCCAAATGAATGCCCATagatctggaatgggatgttcaacaaacacatatgggtgtgaaggtgtccacatacttttggccatatggtgtatgtcAAGATAAGGATGCTGGtgtaggttttgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtgtgtgggcTCCTCCAGCTTCCTGTATGCTAAAAGGCCGAACTGTTCTAGAAATAGCCCCTTTTTACCTGCCCTGACAAGAGCGCATGCTTTAACTTCACGCTTTCCTTTCTATTTCCTTCTTTACAATTTTACCAAGCTAGCAGTTTCCATTCTTTGAGCAAAGTCGTACATCTGAGCAGTATTGGTTTATTTATCAAGGATGTATATACTTCAGTGTATAGTGAGTATCtttctgcattttatataaatatgtgtgtgtagcaaATACATTGTTAGCTGAGTgccattttttccatttttttttttttttttttttttttttgttcctcttgAAAATGTACCTTTGGCCTCACAGATGTGTGTGAGCTCAGCCATTTTtggtaaaaaacaaaattacaaaataaaatctaaacacCAAA

Function

symbol description
cyth1a Acts upstream of or within epiboly involved in gastrulation with mouth forming second. Is expressed in blastoderm. Orthologous to human CYTH1 (cytohesin 1).
cyth1 Enables guanyl-nucleotide exchange factor activity. Acts upstream of or within regulation of cell adhesion. Located in cytoplasm and plasma membrane.

NR:

description
PREDICTED: cytohesin-1 isoform X1

GO:

id name namespace
GO:0030155 regulation of cell adhesion biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0032012 regulation of ARF protein signal transduction biological_process
GO:0005802 trans-Golgi network cellular_component
GO:0005886 plasma membrane cellular_component

KEGG:

id description
K18441 CYTH; cytohesin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026917129.2 True 3325 mRNA 0.47 13 14544412 14601007
XM_026917130.2 False 3216 mRNA 0.46 13 14558312 14601007
XM_026917131.2 False 2961 mRNA 0.47 13 14534573 14601007
XM_026917132.2 False 3072 mRNA 0.46 13 14570677 14601007

Neighbor

gene id symbol gene type direction distance location
usp36 usp36,LOC107717487,LOC104948677 coding upstream 7044 14501308 ~ 14527529 (+)
timp2b LOC108277022 coding upstream 35004 14491388 ~ 14499569 (+)
LOC113527904 lgals3bp coding upstream 55607 14476246 ~ 14478966 (+)
LOC113528183 LOC108275544 coding upstream 71091 14461356 ~ 14463482 (+)
im:6904045 NA coding upstream 87410 14443634 ~ 14447163 (+)
hid1a hid1,LOC107710705,LOC107698779 coding downstream 277959 14878966 ~ 14899732 (+)
ush1ga ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596,LOC107664446 coding downstream 311182 14912189 ~ 14920677 (+)
LOC113528525 LOC108260868 coding downstream 326546 14927553 ~ 14932006 (+)
zgc:112148 tvp23b,LOC105899270,LOC108437154 coding downstream 334230 14935237 ~ 14941094 (+)
stk19 stk19 coding downstream 373569 14974576 ~ 14979006 (+)
G211076 NA non-coding upstream 52557 14481813 ~ 14482016 (+)
G211058 NA non-coding upstream 67899 14466438 ~ 14466674 (+)
G211032 NA non-coding upstream 100518 14433827 ~ 14434055 (+)
G211031 NA non-coding upstream 101278 14432370 ~ 14433295 (+)
G211006 NA non-coding upstream 154676 14378543 ~ 14379897 (+)
G211117 NA non-coding downstream 3710 14604717 ~ 14692759 (+)
LOC113528421 NA non-coding downstream 42709 14643716 ~ 14644243 (+)
G211208 NA non-coding downstream 113664 14714671 ~ 14714875 (+)
LOC113527943 NA non-coding downstream 237283 14838290 ~ 14844372 (+)
G211247 NA non-coding downstream 243415 14844422 ~ 14844562 (+)
zgc:158403 zgc:158403,LOC108258290,LOC108441004,LOC107718630,LOC107553678,LOC107661656,LOC107695678 other upstream 1040631 13464085 ~ 13493942 (+)
znf653 znf653,LOC104961106,LOC107553636,LOC103393609 other upstream 1088887 13435381 ~ 13445686 (+)
ndufb10 ndufb10 other upstream 2160201 12367566 ~ 12374372 (+)
arhgap17b LOC108279379,LOC108432202 other upstream 2344503 12158703 ~ 12190070 (+)
LOC113528416 LOC108275780 other upstream 2394202 12135269 ~ 12140371 (+)
socs3a socs3 other downstream 18197 14619204 ~ 14621788 (+)
LOC117598752 NA other downstream 387079 14988086 ~ 14991450 (+)
G211913 NA other downstream 1317210 15918217 ~ 15968759 (+)
LOC113527983 sstr5,sstr2,LOC108260271,LOC103373483,LOC107083133,LOC104918336,LOC102291375 other downstream 1539323 16140330 ~ 16146326 (+)
srl srl,LOC108261333,LOC107695714,LOC107661647,LOC107718567,LOC107553668 other downstream 2486277 17087284 ~ 17113156 (+)

Expression


Co-expression Network