dele1 (kiaa0141)


Basic Information

Item Value
gene id dele1
gene name kiaa0141
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 21035260 ~ 21044307 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026917161.2
TAGAGCTGCATGCAGAAGCGGCAGTTCGCTCATGTGCTCCTGTGATCATGGACACAacctaaacaaaaataataataataaccatacAATTTTACATCTTAGGAAACGTAATAACGCATAGATAATTAAGTGAGACTTAAGAACAAGCTGAAGATGTGGCGAATACACAGCTTGGTGGGGAGAGTTTTAAGccgttgccatggcaacacgtCGTCTTTGCGTCTCCCGAACGGCCACCACGTTGAGGATGAAGTCATCAGCTCATCGTCGGTGCTCTCCACCAGCCGGTCTCAGAGAGGGGATGATAGAGAgcggaagaaaaacaaaagaacggCAGAGTTCTGCTCTGCTGGAATGCAGAGATACACCGCGCTGGATGCAGTGGGTTGGggtgctGCGGCGGTTCTGTTCATGCAGATCTGCAGGAGGATCCACTCTCAGTTCTCCTCAGTTGGCGAACAGAACCCAGGAACCGCCCGCCTCCCAGAACCGGGCCTCAtccacaaatgcacacacaagaTCCTGCTCGACATGCTGTCAGCGCACATTGTGTTGCCCcgtggagtgtgtgtaatgggTGTGAAGGGGGCGTTAACATGTCCAGAccaaagcagcagcagcagtggcagcagtagcagcagcagtgtttATAATTACAGCGCTGTTGATGAACCTCTGCACCCCATCACTGACCAGCAGGGGGAGACAGTCAACCATGATATCACAGAAGCACTCTCAGACATTAATGTTACCCAAACAGCAGTCGCTGGATCTGAAGTACCACAAGGACGGagcTCGTGCTCTCTGGATGAAGCTGAGAGGAATCTGAGAGACGTCGCAGGCAACAGCGTGCCTGTTATCCTCAACATCATCGgtctgGAGAGTGCTAAAGCAGGCGATCATAAGGCAGCGTTCGAGTGTTTTCAGGCTTCGGCTCAGCAGAACTACAGCAAAGCTCAGTTTAATGTCGGAGTGTGTTATGAGACGGGCCGCGGAGTCGAGAAAGACCTTAGGAAGgccctgcagtattacaggtgtGCAGCATTGGCAGGTCACACACAGGCTCAGTACCGCTGTGCTAAACTCCTCTTGAGCAGCAGGAGGCAGCAGAGCGTCATGGCCACACACACCGCTACAGCTACAGCCATCTCTCTTCTGCAGAGCGCCGCTGCTGCCGGACTCACTGAggcTCAGCTGTATCTGGGTGTGTTATTCTCTCAGGATCCAGATTCTGATGGAGCAAAATCAGTTCACTATTTCAGAATGGCAGCGGAGAgtggagacagtACTGGTCTGCTGTTTCTCGGTCAGTGCTATGAAAGAGGGTTCGGTGTTCCTATGTGTTACAtgactgcagtgtgttattacGAGAAAGCAGCAGCTAAAGGAAACCAGCAGGCCAAGAACAAACTCGACCTGCATAAACGAGAAgtccTGCGCTCTATCCGTTCCGCTCCTTGTCTCTCAGTTTTGGATCGTCTTACTCTGAGCTCCATGTTTCCTCCAGCGCCAAACGCAAACCCACAGACGGATTCGCCGACTCAGCCGCTTCCTCATTCATGGAGCACAGGCAGTCTTGTAGCTTCGCCCCCTTTTACTGCTCATACACTCAGTGCTGACTGCAGAAGTGGGGGCTGGGTTATAGGGGtgggataacacacacacacacacactctcacacacacgcacacacacttaaatttTCAATCAACGGTTGACGTTGAGCGCACAAGAACAAACACTTGCTTTTGAGGAAtgttctcagccaatcagagctgaGCTTGAATGTTTTAAGCACTGTTATTGGGTGAGAGAGAACGAGTCACGTTTATAAAACCTACATTAATTTgttaggttgtttttttttttttttaaataaaggaccTGGGTGGCCCTTTGCTATATGCCTGCTTGCATTCTTAAGAGATGTTCTGTGAATCTATCAGCTTGAGCAATGAACATTAGATGGCAAATCAGGTAAAGCTTCACTCTCAACCAATACAATTCTGTATGGAAACCCACTATACATCTTTTCCTTGTTTAGTCTCTGGTGTGACGTAGGTGTTACACACTCCAGCTCCTGAGGGGAGGGGAGTTGACGATGTTTGCCTGACATAGACTGCTGTCGTGACATGAGCCCTTTTACAGGAGCAGTGTGATCAAGGGAGTGAAATAGACCCCATTTCCACCTTATTCCATAAGACATGTTTGTCATCTGAAGTTTGCTATTTAAGTGTTTTTTCACTGAAGCTACAAGGCTGATGTAGGTCACACATAAGGCTAAGTGATATAATTGtgcataaacattaaatatacaaatatgcaATCTCTCCTTCGATACTttaagccacgcctcctacctTTATAACCTTTCCGTAAAATACGTTAGCCTTGTAGATCCAGCGCAAAAATGAATGAAGCAAACTTGTCTAACCTACAAACCCTGACTTTGACTTCAACAGTACAGTTGCACTCAAATTTTACTTACATTGTGATGAAATGTAAAGTAGAAGccaaaataaatgctttatattATGTGCCTTGATTAAACCCTCCCCAATGTAAGTGCATCTTTATTGCATTAATAATGATGTGATGAGAATTTGACTGTGTAtctttatgtctgtgtgtattttctttgtttgtatACTGTGATCATGAATGTATGAAGCACTATGGCCTGTTCGACGCACACTTTATAGTTTAGCAAATAAAGAAACTTTTCTACCAGTG

Function

NR:

description
PREDICTED: death ligand signal enhancer isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026917161.2 True 2733 mRNA 0.47 12 21035260 21044307

Neighbor

gene id symbol gene type direction distance location
ankrd50 ankrd50 coding upstream 256028 20746708 ~ 20779232 (+)
LOC113528524 LOC108258618 coding upstream 590314 20439441 ~ 20444946 (+)
leprotl1 leprotl1,LOC103152176 coding upstream 596392 20430641 ~ 20438868 (+)
drd5a drd5,LOC107701828 coding upstream 1032580 20000958 ~ 20002680 (+)
zbtb49 zbtb49 coding upstream 1038327 19963720 ~ 19996933 (+)
LOC113528291 LOC108261075,LOC108434533 coding downstream 2954 21047261 ~ 21082014 (+)
tlr1 LOC108258270 coding downstream 137106 21181413 ~ 21184850 (+)
f8 LOC108279904 coding downstream 162152 21206459 ~ 21226848 (+)
LOC113527948 NA coding downstream 244173 21288480 ~ 21293794 (+)
sec24b sec24b,LOC108434542,LOC107596339,LOC107731363 coding downstream 257336 21301643 ~ 21328754 (+)
G214548 NA non-coding upstream 108582 20908828 ~ 20926678 (+)
LOC117598998 NA non-coding upstream 182666 20845141 ~ 20852594 (+)
G214369 NA non-coding upstream 563496 20471529 ~ 20471764 (+)
LOC113528473 NA non-coding upstream 642040 20264198 ~ 20393220 (+)
G214144 NA non-coding upstream 820833 20213406 ~ 20214427 (+)
G214694 NA non-coding downstream 100513 21144820 ~ 21158088 (+)
G214723 NA non-coding downstream 118593 21162900 ~ 21163304 (+)
G214731 NA non-coding downstream 140959 21185266 ~ 21186303 (+)
G214753 NA non-coding downstream 154235 21198542 ~ 21244785 (+)
LOC117598756 NA non-coding downstream 312543 21356850 ~ 21359059 (+)
nudt6 nudt6 other upstream 11173 21011774 ~ 21024087 (+)
LOC113528520 znf518b other upstream 861908 20022509 ~ 20173352 (+)
G214015 lyar other upstream 1053880 19978314 ~ 19981380 (+)
LOC113528304 evc2 other upstream 1081974 19933824 ~ 19953286 (+)
LOC113528458 LOC108275785 other upstream 1123528 19873076 ~ 19911732 (+)
hopx hopx other downstream 296109 21340416 ~ 21349086 (+)
LOC113540568 LOC108280981,LOC108280985,LOC108277574,LOC108277545,LOC108280967 other downstream 437715 21482022 ~ 21513040 (+)
LOC113540569 LOC108280981,LOC108280985,LOC108277545,LOC108277574,LOC108280967 other downstream 470266 21514573 ~ 21565376 (+)
G215015 LOC108275153 other downstream 601773 21646080 ~ 21649152 (+)
G215022 NA other downstream 618777 21663084 ~ 22000809 (+)

Expression


Co-expression Network