csf2rb


Basic Information

Item Value
gene id csf2rb
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 9300101 ~ 9312782 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026917276.2
acactctcagaaaaataaatgcactcaAGGAACTGTCTACAGTTAAGCCAGTCCACATACACctattaacagatttttttttgagtctCAGTAATATGGATTAACAGAATTCGTGAGAGGTTCTCACACAGGCCGTaagattttgaaattgtgaggtcagggctctctgGTGTCCCACTCCAAATACAATGTTCCCCTTGAGGACACTGCTTATTGCAGCACTGCCTCTGCTGGTCCTGAGCTCCAACCCTGAGCAGTGCTCTTCTCAAACCTCTACTCATCACAATTCTCCTATGCTGGCATCGCTGCAGTGCTATAATGACTTCACCACTCAGATACGCTGCACCTGGGAGGTAGAGTCACACACAGACTTCCTCGTGCCAATCAGCGATGGAGAACCGTGTATCCCTGATGATCACAGTAAGATGCAGTTTAGTGGAAATCGCACCCGGAGTTGTGTCTATAATACCGAAGTGTTTAGCATGGGCAGTCATGTCTTCTTCTTCAACACATCCTGTCCTTCTAAAGTGACAACTTTTAATATAGCTGCACAAGGCAAGGTCCTGCCCCCAACTAAATTCTCCGAGAAAAAAGTGAATGGGAGCAACCGACTACTGAGCTGGAGCAGCCCGTATCCTCCCTCATCCCCTCTCACACTAAACCTTACCTACCAGCTCAAGTACAGAAGACATGAGCATGAGTGGATTGTGATAGATGATATCACTATCACAGAGTTTGAGATCGAGAGTCAGAACCTCTTGCCAGGCTACTCATATGAGGCCAGGGTGCGAGCCCGGGGTCCTGTAGGCCTGTGGAGCAGCTGGAGCCCCAAAGTGGTCTGGATGACTGAAGAAGAAGGTGTCATTAACCTGCAGTGTGTAATTAAGGAAGGAGGGGTGATGTGTAGTTGGCAGGTGAAGAAAAGGCAGGCCGAGTTACTCTCGTATCACCTGTGTGGCCACACCAATGGAACAAGCGTGAAATGTAACCACTGTAGCAGTCACACTGAGCGTCCTCACTCTGGAACCTTTCtaaattttacatgttcattgAATAGCTCTGAACCTGAGCTGCTGACCATGGAGATCAGAAGTGTACGAAACGCCAAAGAATTTAGTAACCCTGACAACATTCAGCCCCCACGTCCATCCCAACTTCGGGCGCATAGGGAGGATGGTGTTTGGAAGCTGAGCTGGGCCCGACCTAGTGTTAATGATAAACTCACACTCTTCTATGAGGTGTACCTCGAAAGCAATGACACAAAGAATAAGGTGGAATTCAATCTCTCTGAGGCAGATCTCAGTTCAAATGTTCCCACCTCCCACCTGTTGTCCTCTACAAGATACATGGCTAGGGTGAGAGCACATCCTGGCCGTGACTATGCTGGACGACCCTCTGACTGGTCTGATCCCACGTACTTCACCACTGATCCAGctcCCTGGATCAACACCATAATTTACCTCTTGATAGCTACGTTAGTGGCCGTGCTTTTCATCATCTTGTATAATGCCCTTCCAGCCTGCCACAGgagagtgGTACTGTGGAATGTATCCATTCCCTCTCCCATTAACAGCAAAGTCCTGGGGGACATGAGCAGTAAGAAATTTCTTGCTGGTGAGGCCAATCCATACACTAGCAATGAGAAAACCTGCGTGTTCATCATACAGACCTCAGATAACCCTATCATCTGTAAGGGCAGtATCTCTGAGTACCCGCTCCTGACATGCAGCAATGACAGTGACATGGGCCTTGGCATGAGTGAATCAGGATGGCCACAAGGCTCAAGCCACTCGTCTTTATATGTAGATGGGAGCAGAATGACAGACAAATCTGGCGTAAGCTTCATTGGACCTTACATCCTCTGCCGCGAGGACTCGTCAGTGCCACCTGAAACTTCGGACACATTCTTCCCTTCCCTTTTAACTTTCGATGATGATGGAAGATACATTTCTGAGAGCCCCAAGGATTCTTTGCCAATAAAAGGAGGCTATGTTTTATCCCCTCCCAAAAATCCAACTTCAGAATGCTTAACCCCAATCGATAATCAAGCTAGTGAGAACGGAGAGCCCAGGAACTCATCCCACCCTAACGATGATCCCCCGGCATACACCCCAAGCCCAGCTGCGGTGTCCAGTGCCATTTTTTCTCACCCGTCTGGATACTGTCTGATGCCCAACATGGAGACTGTTGCAGCATGGGTGTCTGCTTCTGTCCCACCACCAGAGggcaacacagagagaaagttGCATGAGATAGGGGGAGATTCACCTGAGCGCAGCTACGTGACACTTTCTCAGCGTGGACTCTAATACATTCACTTTTAGTGATAAggccacaaattaatatattgagACCAGAAGTTAATCTTTCGGGGCAACAAATGAGGTATCTTGCCCGTGCATTGTGTAACTTGAACCTATGACTTAATATGTTGTGGGTACATCATACTTAATATGTGGCCTCTAGTTAATGATTTGGCGGGAACGGGCAAAACAGGTATTTGAAAATTCACTGTAGATGATGTGGACTAATGGTATATCCATAATGCAATGCCTGGGACTCCAGTATGTCTTTATACATCATTCCAAGATTGAAATAAAGGTTAGGTTCCAGTGGCCACAAAGATCTAATTCAATTGAATTCTCTGTCTTACTAATTTAAATAGCTGTCAGAAGTATAGTTTTTTGTGGCCACACAATTGGCCTTGAGAATCTTGACGGTGTGACGGTGTGACTTGACGGTTCTCATCTTAAAACATCAGCCTTTTTACAGTATGTGTGAACGACATAAAAATGCAAGTAGTAGCAATTTTTCTGTATCACACCATGTTGTCCAGCAGATGGCATTGCTGGTGGACTTTGTGAGACCAACATGTaacttttattctctctctgtttctgcatTATGTTGCACACTGAGTTATGTGATTATTAAAACTGTAGACCCTGAGCTACAGTTACTATACCTGCGACTATGAATGTAAGCTTTTATATAAATTACTTATATTTGAGGTTGTCCTAAGTGTTTTCTGTACTTGTGCAATGTTTAACACGAgttcaaataattaaacaatctgcatttaatacaataattttaCCAATTTATTAACTCAGATATTTGCCAAATACTCCTGTTTAGAACATGTGTTGTAATATGAAGGTCTCTGTTACTGCAAGCCACAAACTGTCTTGtctgtaaatgtactgtatgtgtatgtatacagtgtctaaataaaaatcttagaC
>XM_026917277.2
TGGCTAGACTCAGAAAGGGGAAATCCTCTGACCTCCTCCTATTCCAGGAAGTCGCAAGACTGTTATCTACGTCCCATCAGGAAATCTGTTGCTTTTAGAATTAAAATAAGAGGCTGTGTcgaattgttttgttttgttttgttttttaaatatacttagCACAGTAGCTAGGTCGCGCTTTAATGATGTATCTACCGGAGACCATGAAACACGTCGTCACGTGACGGTACAGTGTCGTCATAATGCGTGTGGATGGAGCGAAGCACGCGCTGGATTTACCGTTAGGGTGACCATGGGACACACGGAGGAGGGATGTTTACTGAACTTTTGGATGTTCTCACACAGGCCGTaagattttgaaattgtgaggtcagggctctctgGTGTCCCACTCCAAATACAATGTTCCCCTTGAGGACACTGCTTATTGCAGCACTGCCTCTGCTGGTCCTGAGCTCCAACCCTGAGCAGTGCTCTTCTCAAACCTCTACTCATCACAATTCTCCTATGCTGGCATCGCTGCAGTGCTATAATGACTTCACCACTCAGATACGCTGCACCTGGGAGGTAGAGTCACACACAGACTTCCTCGTGCCAATCAGCGATGGAGAACCGTGTATCCCTGATGATCACAGTAAGATGCAGTTTAGTGGAAATCGCACCCGGAGTTGTGTCTATAATACCGAAGTGTTTAGCATGGGCAGTCATGTCTTCTTCTTCAACACATCCTGTCCTTCTAAAGTGACAACTTTTAATATAGCTGCACAAGGCAAGGTCCTGCCCCCAACTAAATTCTCCGAGAAAAAAGTGAATGGGAGCAACCGACTACTGAGCTGGAGCAGCCCGTATCCTCCCTCATCCCCTCTCACACTAAACCTTACCTACCAGCTCAAGTACAGAAGACATGAGCATGAGTGGATTGTGATAGATGATATCACTATCACAGAGTTTGAGATCGAGAGTCAGAACCTCTTGCCAGGCTACTCATATGAGGCCAGGGTGCGAGCCCGGGGTCCTGTAGGCCTGTGGAGCAGCTGGAGCCCCAAAGTGGTCTGGATGACTGAAGAAGAAGGTGTCATTAACCTGCAGTGTGTAATTAAGGAAGGAGGGGTGATGTGTAGTTGGCAGGTGAAGAAAAGGCAGGCCGAGTTACTCTCGTATCACCTGTGTGGCCACACCAATGGAACAAGCGTGAAATGTAACCACTGTAGCAGTCACACTGAGCGTCCTCACTCTGGAACCTTTCtaaattttacatgttcattgAATAGCTCTGAACCTGAGCTGCTGACCATGGAGATCAGAAGTGTACGAAACGCCAAAGAATTTAGTAACCCTGACAACATTCAGCCCCCACGTCCATCCCAACTTCGGGCGCATAGGGAGGATGGTGTTTGGAAGCTGAGCTGGGCCCGACCTAGTGTTAATGATAAACTCACACTCTTCTATGAGGTGTACCTCGAAAGCAATGACACAAAGAATAAGGTGGAATTCAATCTCTCTGAGGCAGATCTCAGTTCAAATGTTCCCACCTCCCACCTGTTGTCCTCTACAAGATACATGGCTAGGGTGAGAGCACATCCTGGCCGTGACTATGCTGGACGACCCTCTGACTGGTCTGATCCCACGTACTTCACCACTGATCCAGctcCCTGGATCAACACCATAATTTACCTCTTGATAGCTACGTTAGTGGCCGTGCTTTTCATCATCTTGTATAATGCCCTTCCAGCCTGCCACAGgagagtgGTACTGTGGAATGTATCCATTCCCTCTCCCATTAACAGCAAAGTCCTGGGGGACATGAGCAGTAAGAAATTTCTTGCTGGTGAGGCCAATCCATACACTAGCAATGAGAAAACCTGCGTGTTCATCATACAGACCTCAGATAACCCTATCATCTGTAAGGGCAGtATCTCTGAGTACCCGCTCCTGACATGCAGCAATGACAGTGACATGGGCCTTGGCATGAGTGAATCAGGATGGCCACAAGGCTCAAGCCACTCGTCTTTATATGTAGATGGGAGCAGAATGACAGACAAATCTGGCGTAAGCTTCATTGGACCTTACATCCTCTGCCGCGAGGACTCGTCAGTGCCACCTGAAACTTCGGACACATTCTTCCCTTCCCTTTTAACTTTCGATGATGATGGAAGATACATTTCTGAGAGCCCCAAGGATTCTTTGCCAATAAAAGGAGGCTATGTTTTATCCCCTCCCAAAAATCCAACTTCAGAATGCTTAACCCCAATCGATAATCAAGCTAGTGAGAACGGAGAGCCCAGGAACTCATCCCACCCTAACGATGATCCCCCGGCATACACCCCAAGCCCAGCTGCGGTGTCCAGTGCCATTTTTTCTCACCCGTCTGGATACTGTCTGATGCCCAACATGGAGACTGTTGCAGCATGGGTGTCTGCTTCTGTCCCACCACCAGAGggcaacacagagagaaagttGCATGAGATAGGGGGAGATTCACCTGAGCGCAGCTACGTGACACTTTCTCAGCGTGGACTCTAATACATTCACTTTTAGTGATAAggccacaaattaatatattgagACCAGAAGTTAATCTTTCGGGGCAACAAATGAGGTATCTTGCCCGTGCATTGTGTAACTTGAACCTATGACTTAATATGTTGTGGGTACATCATACTTAATATGTGGCCTCTAGTTAATGATTTGGCGGGAACGGGCAAAACAGGTATTTGAAAATTCACTGTAGATGATGTGGACTAATGGTATATCCATAATGCAATGCCTGGGACTCCAGTATGTCTTTATACATCATTCCAAGATTGAAATAAAGGTTAGGTTCCAGTGGCCACAAAGATCTAATTCAATTGAATTCTCTGTCTTACTAATTTAAATAGCTGTCAGAAGTATAGTTTTTTGTGGCCACACAATTGGCCTTGAGAATCTTGACGGTGTGACGGTGTGACTTGACGGTTCTCATCTTAAAACATCAGCCTTTTTACAGTATGTGTGAACGACATAAAAATGCAAGTAGTAGCAATTTTTCTGTATCACACCATGTTGTCCAGCAGATGGCATTGCTGGTGGACTTTGTGAGACCAACATGTaacttttattctctctctgtttctgcatTATGTTGCACACTGAGTTATGTGATTATTAAAACTGTAGACCCTGAGCTACAGTTACTATACCTGCGACTATGAATGTAAGCTTTTATATAAATTACTTATATTTGAGGTTGTCCTAAGTGTTTTCTGTACTTGTGCAATGTTTAACACGAgttcaaataattaaacaatctgcatttaatacaataattttaCCAATTTATTAACTCAGATATTTGCCAAATACTCCTGTTTAGAACATGTGTTGTAATATGAAGGTCTCTGTTACTGCAAGCCACAAACTGTCTTGtctgtaaatgtactgtatgtgtatgtatacagtgtctaaataaaaatcttagaC

Function

GO: NA

KEGG:

id description
K04738 CSF2RB, IL3RB, CD131; cytokine receptor common subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026917276.2 False 3245 mRNA 0.45 14 9300101 9312782
XM_026917277.2 True 3459 mRNA 0.45 14 9301142 9312782

Neighbor

gene id symbol gene type direction distance location
baiap2l2a LOC108258393 coding upstream 54317 9233003 ~ 9245784 (+)
doc2a doc2a,LOC107739394,LOC107552479,LOC107689068,LOC107754561,LOC107567185 coding upstream 200860 9074969 ~ 9099241 (+)
atxn2l atxn2l coding upstream 278568 9009585 ~ 9021533 (+)
sh2b1 sh2b1,LOC108410604,LOC102776240,LOC104967735 coding upstream 293256 8993518 ~ 9006845 (+)
LOC113528379 LOC108274113 coding upstream 309912 8986572 ~ 8990189 (+)
si:dkey-110g7.8 LOC108259846 coding downstream 77642 9390424 ~ 9400838 (+)
nfe2l1a LOC108279857 coding downstream 165029 9477811 ~ 9488541 (+)
eve1 LOC108275867,LOC108412315 coding downstream 466741 9779523 ~ 9781922 (+)
atp5mc1 atp5g1,LOC108256653,LOC108413019,LOC107740625,LOC107662391,LOC107585044,LOC107582887 coding downstream 494016 9806798 ~ 9811581 (+)
ube2z ube2z coding downstream 501302 9814084 ~ 9827009 (+)
G208229 NA non-coding upstream 131085 9168275 ~ 9169016 (+)
G208197 LOC108260010,LOC108274064 non-coding upstream 174311 9115188 ~ 9125790 (+)
G208133 NA non-coding upstream 252685 9045645 ~ 9047416 (+)
G208132 NA non-coding upstream 255979 9041794 ~ 9044122 (+)
G208125 NA non-coding upstream 268180 9031393 ~ 9031921 (+)
G208336 NA non-coding downstream 60468 9373250 ~ 9374453 (+)
G208326 NA non-coding downstream 62158 9374940 ~ 9375627 (+)
G208378 NA non-coding downstream 172916 9485698 ~ 9490734 (+)
G208382 NA non-coding downstream 182233 9495015 ~ 9498049 (+)
G208403 NA non-coding downstream 242830 9555612 ~ 9555814 (+)
nupr1b nupr1,LOC108413333,LOC107660958,LOC107739393,LOC107567154,LOC100692788,LOC103393451 other upstream 236688 9061563 ~ 9063413 (+)
asphd1 asphd1,LOC107568490,LOC107755186,LOC107552472,LOC107739384 other upstream 342001 8950466 ~ 8958100 (+)
trnas-cga_1 NA other upstream 1291690 8008186 ~ 8008411 (+)
G207480 LOC107834952 other upstream 1446592 7853191 ~ 7853509 (+)
spsb3a spsb3,spsb3a,LOC107689049 other upstream 1978136 7309207 ~ 7321965 (+)
rapgefl1 rapgefl1,LOC107717207,LOC107662398,LOC107740631,LOC107667751,LOC107585050,LOC106600822 other downstream 631524 9944306 ~ 9987773 (+)
G208781 cacng4b,LOC108259704,LOC106606650,LOC107565862,LOC107691234,LOC106601773,LOC107724746,LOC107713946 other downstream 1036620 10349402 ~ 10781459 (+)
cdc42ep4a LOC108256079,LOC108432235,LOC103033379 other downstream 1967298 11280080 ~ 11388020 (+)
luc7l3 luc7l3,LOC107674472,LOC107726809,LOC107654661 other downstream 2254337 11567119 ~ 11577823 (+)
tbc1d16 tbc1d16,LOC107559246,LOC107689993,LOC107670685,LOC107562324 other downstream 2736625 12049407 ~ 12086058 (+)

Expression


Co-expression Network