mosmoa (c17h16orf52,c16orf52.L,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214)


Basic Information

Item Value
gene id mosmoa
gene name c17h16orf52,c16orf52.L,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 10146848 ~ 10185101 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026917296.2
GATCCAGTAGTCGTCAAATGAAGAGTCTGGACACAGCCCTGACTGGTTTCTGTAGCTGTCTCGCGGGTTGTGTCGATGCCCCGGTGCTAGCTCGCGTTGCGTGCAGATGCGCTTCCagcagaggagagaggaggaggaggaggaggagggggcaTGAACACACCgccgaggaggaggaggatggctCTCCGCTCGCATAACGGTATCGCTCGGGATCAGCAAACGGCTTTCTCCGCGCTATTCTGACTTCACTTATCGCATATTGCTCATATACGCCGAAACCGTCGCCTTCAAACGCGTAGCCAGATGGGTGTTCGGGTGCCGAGTGGTTGTAGGCCCGCCGTCCGGCGCTCGGATCCTCACACCGGGGCCGTGTTGTGCTAGCTAACGCTGCTCGTGCTAGCCGCGCGCACCGAATGCCGCTGCACCGAATGAGTCTCGGGGCCTCAGCAGCGACATACCGCTTCATAACGGACACACAAGCGCTAACCGCCGGGTCCTGAGATGTAAACGCGGCTCTTATCGCGGGTGGACCATAATTGCAGGACGGGAAGTGATGTGGCTAAACGACTAAAAGAGCTCAAGCTAAACCTGCTACCCTGAAACACTGAGTCCTCGCGCTTTTCAGGACAAATTCCCCCCCTCCCGCACTTCACCTCGACACGGACTGAGATGGATAAACTGACCATCATTTCAGGGTGTCTCTTTCTGGCTGCGGATATATTTGCCATAGCAAGCGTCGCAAACCCGGACTGGATCAACACAGGCGAGTCTGCTGGTGCGCTGACTGTGGGTTTGGTGAGGCAGTGTCAGACCATTCACGGCCGAGACAGGACCTGCATCCCTCCTCGATTGCCGCCTGAGTGGGTCACCACGCTGTTCTTTATCATCATGGGCATCATCTCCCTCACAGTTACCTGCGGCCTTCTAGTGGCATCACACTGGCGCCGAGAAGCCACAAAGTATGCGCGGTGGATAGCCTTCACAGGAATGATCTTGTTCTGCATGGCAGCGCTCATCTTCCCCATTGGCTTCTACATTAACGAAGTGGGCGGCCAGCCGTACAAGCTGCCCAACAACACCGTGGTGGGCTCGTCCTACGTGCTCTTCGTGCTCTCCATCTTCTTCACAATAGTAGGGCTGTTGTTTGCAGGAAAGGTCTGCCTGCCTGGCTGAGGATGCCGTTTTCTCCAAGGATTGTCCAGGagcttttggattttttttttcgaagAGGAACAAAAAATAGCAGTGCTCGCTGTGGAGGAGAGCTGTCAGACGTGGGATGGTGACACTCCAGATTAACATCTAACTCAGAAAATGCCAGGGCACTCACTTTCTGCACAATCTGTGGGTCCTGTCAGTGTCCCCCAGAAACCAACCTGAGCTTATTTGTTGCACCTGTCTTTACGTTGTACTTCGGATTGTCCGTCCAACGCAGGACAGAGGAGCCTGGGAGGGGATCACCTGCGTTCCAGGTGATGTGAGGGCTCACACTGAAGATTTCATGCTTAATTTTGTCCCTCATGAGCATATTTTTTGTTCAGTTACTATAATTTTACTCCAGCATTGTACAGTTTTGTATGGATACAACATGCACATTTGCTAAAAGGAAGATGTGAGGCTCCACATTGCCttcatcagtccatcagtgtgCTTCAGAGCAGAGGATGAATATCTGAATGATGTGCATATGTGAGAGAACTCAgtagaaaaaacattttgttagaAACACTACAGGAAACAGAAGCACTAGGACTGCCGGTCAGGACCCTGTGAGGCCGAGCCTCACTGTGCTAACTCCCTCACCTGAGAGACTttttacacacgcacacacaaacacacacacacagaggtctgGTGACCAAAATGAACCGCTACCTGCCCTTGTATGCATCCTGGGCTCCATCAGGTCAGTGTTTGAGAAGACCAGAGAGAGGGAGACCTGTTCTGTCCTTTAACCTGATTACGTTTTTTCCTTGTCctgatttgatcttctgacacTCGGGACATGTTCGGGGTTATTCGTTAACGTGCCATGAATCTGTTTCCATTGTATCAGTACTAAGGGCAGACTCGGTTAGAGGGAGCACTGTGCAGTAAAGCCATTAGTATTTGAAACACCGCAGATGTACAAAAAAAGAGACCTCCTTACCTCATTGTTTTTgtaattcaaacatttttttttcctttgctaaCCATAACGTTGTGTGCCCTGTAAGTTATATCTTGCCTTGGTCAGAGACATttatcgaaaaaaaaaaatgctgtgatcATTGCAAATTATTTATCTGACACTGAATAACAGGAGAACAAGAATGTGtga

Function

NR:

description
uncharacterized protein C16orf52 homolog

GO: NA

KEGG:

id description
K23663 MOSMO; modulator of smoothened protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026917296.2 True 2323 mRNA 0.50 3 10146848 10185101

Neighbor

gene id symbol gene type direction distance location
nags nags coding downstream 12825 10122386 ~ 10134023 (-)
col1a1a col1a1,LOC108279263,LOC107585052,LOC107740634 coding downstream 84927 10042181 ~ 10061921 (-)
ppp1r9ba ppp1r9b,LOC108412948 coding downstream 113763 9988116 ~ 10033085 (-)
nr1d1 nr1d1 coding downstream 242454 9896866 ~ 9904394 (-)
hoxb13a hoxb13,hoxb13a,hoxb13aa,LOC107687788,LOC107662424,LOC107585093,LOC107740673,LOC107582955 coding downstream 376930 9767867 ~ 9769918 (-)
si:ch211-256e16.3 si:ch211-256e16.3,LOC108260968,LOC108412900,LOC107717492,LOC107552129,LOC107674048,LOC106601741 coding upstream 12407 10197508 ~ 10207214 (-)
anks4b anks4b coding upstream 24247 10209348 ~ 10213411 (-)
dxo dxo,LOC106601672,LOC106606733,LOC107666098,LOC107743041,LOC107691245,LOC107752708 coding upstream 38294 10223395 ~ 10229399 (-)
pitpnc1a LOC108274028,LOC108412868,LOC107691236,LOC107665814,LOC107752702,LOC106903613,LOC107743029 coding upstream 45535 10230636 ~ 10296123 (-)
cacng1b cacng1,cacng1b,LOC108412846,LOC107666105,LOC107724731,LOC107691235 coding upstream 160164 10345265 ~ 10355473 (-)
G208649 NA non-coding downstream 80492 10063977 ~ 10066356 (-)
LOC117599011 NA non-coding downstream 218906 9829627 ~ 9927942 (-)
G208613 msl1 non-coding downstream 229319 9914907 ~ 9917529 (-)
LOC113528446 NA non-coding downstream 308436 9837250 ~ 9838412 (-)
G208473 NA non-coding downstream 398809 9746496 ~ 9748039 (-)
G208758 NA non-coding upstream 1935 10187036 ~ 10187252 (-)
G208771 NA non-coding upstream 36609 10221710 ~ 10290885 (-)
G208951 NA non-coding upstream 156810 10341911 ~ 10342222 (-)
G208964 lmtk2 non-coding upstream 262635 10447736 ~ 10450540 (-)
G208980 NA non-coding upstream 333241 10518342 ~ 10518947 (-)
hoxb8a hoxb8a,LOC108278530,LOC108413053,LOC103044850,LOC107582957,LOC107662386,LOC107585089 other downstream 414282 9729851 ~ 9732566 (-)
copz2 copz2,LOC108260256,LOC108413159,LOC107740614,LOC107662379,LOC107710054,LOC107585036,LOC107687783,LOC105013247,LOC108246742,LOC106527321,LOC106912034 other downstream 672370 9464331 ~ 9474478 (-)
prr15la LOC108273894,LOC108412372 other downstream 727264 9409804 ~ 9419584 (-)
dnal4a dnal4,LOC108261343,LOC108412416,LOC108436609,LOC106591471 other downstream 943208 9196496 ~ 9203640 (-)
LOC113527952 LOC108260010,LOC108274064 other downstream 1003977 9112966 ~ 9142871 (-)
tecpr1b LOC108276900 other upstream 265623 10450724 ~ 10470518 (-)
hmox1a hmox1,LOC108432221 other upstream 1457056 11642157 ~ 11647997 (-)
zgc:162612 foxd1,LOC108278341,LOC107757501 other upstream 1514748 11699849 ~ 11701172 (-)
LOC113528332 hs3st6,LOC102795972 other upstream 2112675 12297776 ~ 12315498 (-)
msrb1a msrb1 other upstream 2148753 12333854 ~ 12339269 (-)

Expression


Co-expression Network