mettl22 (mettl22)


Basic Information

Item Value
gene id mettl22
gene name mettl22
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 24365746 ~ 24383894 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026947111.2
ACACGGTCATTTACTGATGTTACACACGTCTCTGCAGCTATGCTAGTTGTTAGCTGGGTTTTTAATCTCGACGCAGTTTCGAGGTCATTTTAAGGTACTGACTGAAAGCAGAACGCCGCTGGGAGTTATTTATCCTCCTTATCTTGTAGCTAGAAGCCTAAAATAAACCTCAAACGGTGGCTTGTTAGCGTTTTCACATATTAAAGGAGGTGTGTCTCGGTGTCAAGGGCGGAATTCTGGCCGAATCCTAAATTACACCTGAGTGTGAATAcaagtgcactacgtagggaaTGACGTAATGGACTATACagcctatctagtgcactaatTGTCCAATAGGAGGATATAATAGGATTCTGCCAGATATGGCTGGATAGAGTTGCTTTCTTAGCATTGATGTGGCTCTAATGTAGAGTAGTTAATTTATATCAAGAAAGTTATGCTAATTTATGCACAGAAATGAATAGATAAGGAGTTTTAGCACACAATATCACGCCTGAGTAATTCTGCCTGGTCATATGATCAGAGTCATGGACAAAACACTGCAGCATCCAGAGGGACATGAAGCTCGGGCCATGGACCAGGTCACCTTCCGCAGTGACACCGTGCTCTCTGATGTGCACTTGCTTCTCCCGAACGCTCATCACCTCATGACTCGACTCAATAGCGTCGGACAGCCAGTGTTTTTGTCGAGGTTCAGGATTCTGagggaggaggagcagaaggaggCGTGTTCTCCATCAGAGGAGGAGTCACACTGTCGTCTGGATGAAGACGGAGACCTGGAGGTAGTGAGGAAGCCAGCAGAGACGGCGCAGGGCCGCGCAACCGCTCACCCCGTCATCCTGAGCCAGGCCGAAGGAGCGATtagtgatgaagaggaggaggaggaggaggaatatGGCGAAATGGACGTCATAAAGATCGAGCACACGATGGCGACGCCGCTGGAGGACGTCGGAAAGCAGATCTGGCGAGGAGCTTTCCTGCTCTCCGACTTCATCCTGTCCAACCCGGCTGCGTTCACAGGAGCGACGGTGCTGGAGCTGGGAGCAGGAACCGGATTAGCCAGCATCGTCATGGCAAGTGTGGCAAAAACGGTCTACTGCACAGatgttggTGAAGATCTCCTCAGGATGTGTCAGAGAAATGTGCATTTGAATCAGCATTATATTGCAGCATCAGACGAGTGCGGTGTGAAAGTGAGACAGCTGGACTGGACCGCAGACGATTTCCTCACAGATGCAGACTCAGAATTTGGCTGGAGTGAGGACGAGGTATCAGACCTCCACGATAACACCACGGTCATCATCGCAGCAGATGTGTGCTATGACGATGACCTCACCGACGCCCTGTTTCGGACTCTGTATCGCATTTGCAGTAATCTGCGTCACTCCAGCACCGCCTACATCAGCATAGAGAAAAGGCTGAACTTCACACTGCGCCACATGGACGTGTCCTGCGAGGCGTATGATCATTTCCGCCGCTGCCTAGAACAGATAACGGAGCTGAGAGAGAAGGAAATGAGGTTCACAGTCTCACCGGTGTCCTGCTCCTTCCCTCAGTTCTTCCAGTACGAACGAGTGAACCAACTGGAGCTGTGGAAAGTGTCTGCTTTTCCCTTTCCGACTCAGTGCAGCTCAACATCCTCACGAAATCATGGTGAAAACGATGCAACATTGAAAACTAATCCAGAATCAAGATCCAAGAGTTGATACTCAGCTTTATGCAGTTATAAGTGCATCTTAATGTGAATCCTTAATGTGAATCCtattttatataattcattTAACAAAGGTTTTATTAGATAGGATGAAGGTGGTGGTGCAGTGAAGTgagaatttcattttaatttacttttagcTACAGATTGCGCTTTTTATTTTCGTATCTATCTCGCTCCGGACAGTTGGGATTGCATACTAtggattttaaattattatttaaaaattattgtgtgtttttgtgtgtgattgctGAGATTATGAACGAGTGCTGCAATGAGTTGATTCTGTAGCATATTTCATACATACACAAGGCAATTCAAggtgctttacaaataaaatgagataCACAGAATAAATAGTAGGCTGAAGTAGAGTTTAAAATAGCAGTAATAGGTGTAATATTAAAGAAAAGGTCATATCAAATGTGCTGCCTTTTCCATGATGGACACTAGAGGGCGTGCTAGTCCAATATTACATTTGAGTAGAGATGGGCTCTTCAGTGAGTCAGAACATTTGGCTCATCTCACCAACAAGAGTCGATTCTTCAGGCTCCCAAATGATCCTAAATGATattgtgcaatatttttatgACTAGTGATGCCTAAATATGACTAAAACTATTCTGTTAAGTCCTACTCTACCTTCtcattaacaaaaataacattactttgcattgcattttataaaatttaatacAATCATCTTTAACCTAAATCAGCAATGCACTGCAAATATGCATTGATCAAATATATTAAGCATCTCTGCGTCCTGCTGTATCTGTGCTTAAAGATTTACTTCCACTTATCTCGATTATTATTTGCTTCTTATAATAAACATGCTTAATAGACATAGCTGAAAGTCAAACACACAACCTAGATTCTGAAAATAGGTTTCCAAGGAAGCATTTAAATGGTTGgtgaagagaaatgaatgaaacatttgcCAACATCtacgaaagaaagaaaaaaaaaaagctcacgtGAATCGACCCTCAACCTAAAAGAGTCGGTTCAAGGAGACGACTCCTTCACGAAGGACACATCGCTAACCTGAAAGCGAAAACATGAatctggtttctttctttctttatttttttattgtaaatggAGGCAAtgacattacagaaaaaaagaaaaacaagaaaccaGCTCACAGCTTACTCGAGTCACATGTACAAGTCACATATTCGAGTCACATATGCAAGTCACATTTGCGAGTTGACGCGAAAGCATGTAttaggtttctttctttctggctttctttctttctttgtggaTGTAGGCAATGCCAttacaggaagaaaaaacacaagaaaaacaagaaagcagCTCACATGCGCATACATGAGTCACATGTGCGAGTCGACTCTCAGTGTTCAAAGAGCCGACTCCTTCGCGAACGACACACAGCTAGTTTGAACACACAAACAAGTATTCTGTttctaagtttttatttttaactcccGATCACCAGAACACCTCCCTTCAGTAAAATCCGGGAAACCTGAGGTGACTTAGTATATGGCAAGAGTTGATGTATGAAACATTCTGAAACAAAGATATATAACATTTCTCTCATGCGGTGTTTAAATAACAAgccaaagaattattttatttatttatttatttatttattttagaggGAATCAAATATACACACTGTTTAACCTCAGTTTAAATGTAGTCCATCAGCCATGGCGAGTTTGATGAAATTCTGCTCAAATTTCACTCATTTTTCTGCAacgccataaaaaaaaaaatacacacaattaaGAGACTCCGCCAATTAAAGAGCAAATCATCACAGCTTTCCTTCAAACCTCATCAGGTCACA
>XM_026947113.2
AGACATTCGGTGTCTACACGGTCATTTACTGATGTTACACACGTCTCTGCAGCTATGCTAGTTGTTAGCTGGGTTTTTAATCTCGACGCAGTTTCGAGGTCATTTTAAGCATCCAGAGGGACATGAAGCTCGGGCCATGGACCAGGTCACCTTCCGCAGTGACACCGTGCTCTCTGATGTGCACTTGCTTCTCCCGAACGCTCATCACCTCATGACTCGACTCAATAGCGTCGGACAGCCAGTGTTTTTGTCGAGGTTCAGGATTCTGagggaggaggagcagaaggaggCGTGTTCTCCATCAGAGGAGGAGTCACACTGTCGTCTGGATGAAGACGGAGACCTGGAGGTAGTGAGGAAGCCAGCAGAGACGGCGCAGGGCCGCGCAACCGCTCACCCCGTCATCCTGAGCCAGGCCGAAGGAGCGATtagtgatgaagaggaggaggaggaggaggaatatGGCGAAATGGACGTCATAAAGATCGAGCACACGATGGCGACGCCGCTGGAGGACGTCGGAAAGCAGATCTGGCGAGGAGCTTTCCTGCTCTCCGACTTCATCCTGTCCAACCCGGCTGCGTTCACAGGAGCGACGGTGCTGGAGCTGGGAGCAGGAACCGGATTAGCCAGCATCGTCATGGCAAGTGTGGCAAAAACGGTCTACTGCACAGatgttggTGAAGATCTCCTCAGGATGTGTCAGAGAAATGTGCATTTGAATCAGCATTATATTGCAGCATCAGACGAGTGCGGTGTGAAAGTGAGACAGCTGGACTGGACCGCAGACGATTTCCTCACAGATGCAGACTCAGAATTTGGCTGGAGTGAGGACGAGGTATCAGACCTCCACGATAACACCACGGTCATCATCGCAGCAGATGTGTGCTATGACGATGACCTCACCGACGCCCTGTTTCGGACTCTGTATCGCATTTGCAGTAATCTGCGTCACTCCAGCACCGCCTACATCAGCATAGAGAAAAGGCTGAACTTCACACTGCGCCACATGGACGTGTCCTGCGAGGCGTATGATCATTTCCGCCGCTGCCTAGAACAGATAACGGAGCTGAGAGAGAAGGAAATGAGGTTCACAGTCTCACCGGTGTCCTGCTCCTTCCCTCAGTTCTTCCAGTACGAACGAGTGAACCAACTGGAGCTGTGGAAAGTGTCTGCTTTTCCCTTTCCGACTCAGTGCAGCTCAACATCCTCACGAAATCATGGTGAAAACGATGCAACATTGAAAACTAATCCAGAATCAAGATCCAAGAGTTGATACTCAGCTTTATGCAGTTATAAGTGCATCTTAATGTGAATCCTTAATGTGAATCCtattttatataattcattTAACAAAGGTTTTATTAGATAGGATGAAGGTGGTGGTGCAGTGAAGTgagaatttcattttaatttacttttagcTACAGATTGCGCTTTTTATTTTCGTATCTATCTCGCTCCGGACAGTTGGGATTGCATACTAtggattttaaattattatttaaaaattattgtgtgtttttgtgtgtgattgctGAGATTATGAACGAGTGCTGCAATGAGTTGATTCTGTAGCATATTTCATACATACACAAGGCAATTCAAggtgctttacaaataaaatgagataCACAGAATAAATAGTAGGCTGAAGTAGAGTTTAAAATAGCAGTAATAGGTGTAATATTAAAGAAAAGGTCATATCAAATGTGCTGCCTTTTCCATGATGGACACTAGAGGGCGTGCTAGTCCAATATTACATTTGAGTAGAGATGGGCTCTTCAGTGAGTCAGAACATTTGGCTCATCTCACCAACAAGAGTCGATTCTTCAGGCTCCCAAATGATCCTAAATGATattgtgcaatatttttatgACTAGTGATGCCTAAATATGACTAAAACTATTCTGTTAAGTCCTACTCTACCTTCtcattaacaaaaataacattactttgcattgcattttataaaatttaatacAATCATCTTTAACCTAAATCAGCAATGCACTGCAAATATGCATTGATCAAATATATTAAGCATCTCTGCGTCCTGCTGTATCTGTGCTTAAAGATTTACTTCCACTTATCTCGATTATTATTTGCTTCTTATAATAAACATGCTTAATAGACATAGCTGAAAGTCAAACACACAACCTAGATTCTGAAAATAGGTTTCCAAGGAAGCATTTAAATGGTTGgtgaagagaaatgaatgaaacatttgcCAACATCtacgaaagaaagaaaaaaaaaaagctcacgtGAATCGACCCTCAACCTAAAAGAGTCGGTTCAAGGAGACGACTCCTTCACGAAGGACACATCGCTAACCTGAAAGCGAAAACATGAatctggtttctttctttctttatttttttattgtaaatggAGGCAAtgacattacagaaaaaaagaaaaacaagaaaccaGCTCACAGCTTACTCGAGTCACATGTACAAGTCACATATTCGAGTCACATATGCAAGTCACATTTGCGAGTTGACGCGAAAGCATGTAttaggtttctttctttctggctttctttctttctttgtggaTGTAGGCAATGCCAttacaggaagaaaaaacacaagaaaaacaagaaagcagCTCACATGCGCATACATGAGTCACATGTGCGAGTCGACTCTCAGTGTTCAAAGAGCCGACTCCTTCGCGAACGACACACAGCTAGTTTGAACACACAAACAAGTATTCTGTttctaagtttttatttttaactcccGATCACCAGAACACCTCCCTTCAGTAAAATCCGGGAAACCTGAGGTGACTTAGTATATGGCAAGAGTTGATGTATGAAACATTCTGAAACAAAGATATATAACATTTCTCTCATGCGGTGTTTAAATAACAAgccaaagaattattttatttatttatttatttatttattttagaggGAATCAAATATACACACTGTTTAACCTCAGTTTAAATGTAGTCCATCAGCCATGGCGAGTTTGATGAAATTCTGCTCAAATTTCACTCATTTTTCTGCAacgccataaaaaaaaaaatacacacaattaaGAGACTCCGCCAATTAAAGAGCAAATCATCACAGCTTTCCTTCAAACCTCATCAGGTCACA

Function

symbol description
mettl22 Predicted to enable protein methyltransferase activity. Acts upstream of or within hematopoietic stem cell differentiation. Predicted to be active in nucleus. Orthologous to human METTL22 (methyltransferase 22, Kin17 lysine).

NR:

description
PREDICTED: methyltransferase-like protein 22

GO: NA

KEGG:

id description
K23040 METTL22; methyltransferase-like protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026947111.2 True 3560 mRNA 0.42 11 24365761 24383894
XM_026947113.2 False 3121 mRNA 0.42 11 24365746 24383894

Neighbor

gene id symbol gene type direction distance location
gsg1l gsg1l,LOC108275613,LOC108436662,LOC103031039,LOC107738642,LOC107690243,LOC106938975 coding upstream 494947 23846609 ~ 23870799 (+)
si:ch211-76l23.4 si:ch211-76l23.4,LOC108256336,LOC101172412 coding upstream 552111 23810299 ~ 23813635 (+)
c13h16orf89 c2h16orf89 coding upstream 575047 23784636 ~ 23790699 (+)
eef2kmt eef2kmt coding upstream 587740 23774380 ~ 23778006 (+)
noa1 noa1 coding upstream 592772 23767574 ~ 23772974 (+)
abat abat,LOC107690246,LOC107738621,LOC106592407 coding downstream 1843 24385737 ~ 24418546 (+)
c13h16orf72 c2h16orf72,cunh16orf72,LOC105900007,LOC103025273,LOC107590581,LOC107685917,LOC107738628,LOC103038624 coding downstream 185339 24569233 ~ 24575461 (+)
atf7ip2 atf7ip2 coding downstream 427186 24811080 ~ 24829473 (+)
nubp1 nubp1,LOC107690260,LOC107685912,LOC107590599 coding downstream 483506 24867400 ~ 24896195 (+)
ciita ciita coding downstream 515527 24899421 ~ 24920755 (+)
LOC117598769 NA non-coding upstream 2362 24341688 ~ 24363384 (+)
LOC117598845 NA non-coding upstream 614149 23748207 ~ 23751597 (+)
G215824 NA non-coding upstream 743137 23622372 ~ 23622609 (+)
LOC117599008 NA non-coding upstream 772098 23591868 ~ 23593648 (+)
G215685 NA non-coding upstream 976393 23388418 ~ 23389353 (+)
G216174 NA non-coding downstream 39872 24423766 ~ 24444172 (+)
G216171 NA non-coding downstream 61179 24445073 ~ 24447468 (+)
G216185 NA non-coding downstream 75491 24459385 ~ 24462851 (+)
G216167 NA non-coding downstream 86165 24470059 ~ 24473172 (+)
G216230 NA non-coding downstream 156832 24540726 ~ 24588450 (+)
rbfox1 rbfox1,LOC107733849 other upstream 35746 24038908 ~ 24330000 (+)
fbxl16 fbxl16,LOC107738613,LOC107685932,LOC107568127,LOC107733860,LOC107568165,LOC107690242 other upstream 445343 23894247 ~ 23920403 (+)
igfbp7 igfbp7 other upstream 617615 23742482 ~ 23748131 (+)
LOC113546919 LOC108278588 other upstream 624356 23731454 ~ 23741390 (+)
G215621 LOC108277208 other upstream 1195193 23137246 ~ 23170553 (+)
G216197 NA other downstream 73176 24457070 ~ 24458004 (+)
si:ch211-157c3.4 LOC108278842 other downstream 145785 24529679 ~ 24539117 (+)
G216515 grin2a,LOC107568390,LOC107685916,LOC107690256,LOC108413991 other downstream 413360 24797254 ~ 24797678 (+)
LOC113523791 nacc1,LOC103025552,LOC107577049 other downstream 1873477 26257371 ~ 26301906 (+)
ier2a LOC108261286 other downstream 1921552 26305446 ~ 26306768 (+)

Expression


Co-expression Network