smg1 (smg1,LOC107729485)


Basic Information

Item Value
gene id smg1
gene name smg1,LOC107729485
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 941020 ~ 997685 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310159.1
TGCGCTCACACATGAGCGCAGAAATAGAGGGGAGGGTCAGGCCGCATTGCTCGCACTTTTCAAACACGGCGCTGTTTCTTGCCTTGTTTGATTCGCGTTTTATCAGTTCATAACTCTGTGTAGATTAAACACTCGAAATTCGGACGCATTCTGTGGACGTTTCCCCGTGGTGAAGCGGGTCATGCAGTCCTGGCGAAGGTAATGAGCCGCAAAGCCCTCGGGTCTCGGCTTAGCAGCGCCCATAAACTGCACCGGAACTGGAATGACTGGCAGCCCAGaagcGACAGCACGTCAGCCAGCCAGGAAGGTGTGAAGTGCAGCGTCTCCAGAGACCACGGTTCAGCAGCTGTTTACGAGCCTGCGCACTCCGAGCAGCCGGGAACGCCAACGCCGCCGCCGCACCATGACGCCTACACCGCTCACGGCTCGCTGGaagaagcaggTGTGTATGACGCTGATGGAGGCCACGGTGAAAATACATTTGGTTGGAAGTCGCTGGGGCAAGAGTTGAGGATCAATGATGTGACGGCGGATTTACCCAGTTTTCAGCATGGACACCGTGCTTTAGCTGCAAAGGACATGAGGAAATCACAGGacCGACCGCAGGCTCATTCTGATGAGTCTCGGCTCGCCAATCTTCTGCGGAGGGTGTCGCGGGAGGACGACCGGGACCGCAGGCTGGCTACCTTGAAACAAATGAGGGAACTTATCATCCACTCGGAAAACAAGGTGGTCCTGGTTAAACAGTTGGATACCATTCTGAGCACCCTGAATGACATTTTGaatgaaagCAGTAAACTCCTCCATGAGCTGCGACAGGAAGCGGCCTGCTGCCTGGGTTTGCTCTGCGCTGCCCTCAGCTACGAAGCCGAGAAGATCTTCAAGTGGATGTTTGTGAAGTTCAGCAGCTGCAGTAAGGACGAGGTGAAGCTGCTCTACCTGGTGGCCGTGTACAAGGCTCTGGAGACGGCAGGGGAGAAGAAAGCGTTCTCGCCCGTCATGCAGgtggtgatgagcAGCCTCCAGTCCATCCTGGAGAACCTGGACACCCCGGAGCTGCTGTtgcgcgcgtgtgtgtggaCAGGCTGGTTACAGAGTCTGGAACAGTTCTGGGTGGCTGATTTGGCCTTTTCCACTACGCTGTTGGGTCAGTTTCTGGAAGACATGGAAGCGTACGCAGAGGACCTGAGCCACGTGGTGTCGGGAGAGGTCGTGGACGAGGACGTCCCCCCGCCCGCCGTGTCTCTGCCGAAGCTGGCGGCTCTGCTGCGTGTCTTCAGCACGGTGGTGCGCAGCATCGGAGAGCGCTTCAACCCCATCCGGGGTCCGCCCATCACGGAGGCGTACGTCACTGACgtGTTGAACCGTGTGTTAGCGTGCATCACCGCGGCTAAGCAGGTTTTCTTCTCGGAGGCCGTGCTGACGGCGGggaacgagtgtgtgtgtgtcctgctgaCCAGCATGGACTCGAGCAGCCAGCTAACCGGAGCGGTGATTTCTTACGGCCTGGACCAGCTGGAGAGCTGCCAGTCGTGTAGCGCCGAGTACAGCATGGGCGTCCTGAACCTGCTCACGCTGattgtCGAGCAGATAAACACCAAGCTGCCTGCTACGTTTGTGGAGAAGCTTCTGGGTCCAGGCTCCCAGCTTCTGGAGCTGCGTTTCCACAGAGAGCGAGAGGTGATGGTGGCGGCGCACAGCGTGTACCAGGCGGTGCTGAGCCTGAAGAACATCCCCATCCTGGAGGCGGCATATAAGCTGGTGCTGGGGGAAATGGGCTGCGCTGTGAACAGCCTGCTGGCGCCGCTGGGGCTCCCGCCGGCGTGTCCCAACATCCAGCACGCGGCGTTCGGCCACCTGAAGCTCCGCCCCGACCGAGCCGAGTTCATCCTCATCTTCAACCTCAGCACGCTCACCACCATCGGCAACACCAAGAACTCCCTGATcgggATGTGGGCTCTGTCTCCCACCGTGTTTGCTCTCCTCAGCCAGAATTTGGTGTTGGTTCACAACGAGCTGGCCGTGCATCACCCTGCGGTCCAGTACTCCGTCCtctacacactgtactcacactgcaccagACACGACCACTTCATCTCCAGCAGCCTCAGCTCCTCAAGCCCCTCGCTCTTCGATGGGGCGGTCATCAGCACGGTTACCACGGCAACCAAGAAGCATTTCAGCACGCTTCTCAGTCTGTTAGGGATGCTGCTGAGCAAGGAGCACCTAAACTCCGAGGCCAGGAAGCTGCTTCTCACCTGGTCACTGGAAGTGTGTCTGATGATGAAGAAATCTGAAACATACTCCCCGCTTTTCTCATTACCCTCCTTTCACAGATTCTGTAAAGGACTTCTCGCAAACGCGCTGAACGAAGACTCCACCGTGTGTCTCCAGACCTGCAGCAGTCTACAGGTTCTGTCCTCGTCCCTCCCCATGGAGCTCCTGCAGAGatgTGTGGACGTTTGCCGGGTGCAGCTGGTTCACTCGACCGTACGAGTCAGACAGGCCTTCGGGAAACTGCTGAGATCCATCCCGCTGCACGTGGCGCTGagTAACCGCAGCTCCTCAGAGATTCACGAGATCTCCCTCGCCATCCGGCGGCACATGAGCAAAGCGCCGAGCAACACCTTCCACCCGCAGGACTTCTCCGACCTCATCAGCTTCATCCTGTATGGAACAGTCCACCGTGGGGGgaaggAGCCGTGGTTAGAGAGGTTGTACCACAGCTGTCAGAGGTCGGAGAAGCGCGAGTGTGCCGTGGTGCCGCGCTCCCTGCTGAAGACGGAGGCGGTGCTGTGGCAGTGGGCCGTGTGGGAAGCGGCTCAATTCACCGTCCTCTCCAAACTGCGCACTCCTCTGGGACGAGCCCAGGACACGTTCCAAACCATCGAAGggaTGATCCGCAGTCTGGCGGCTCACAGTCTGAACAGCGAACAGGAGCTGAGTCAGTGGAGTGGAGGAGAGAGCGATGAAGGTCACCACACCAACCAGCTCCGCCTTGCTCTGCTGCTGCAGTTCCTCGAGAACCTCGAGAAGCTCATGTACAACGCTTATGAAGGCTGCGCCAATGCCCTCACCGCCCCGCCCAAGGGCATCAGGAccttcttctacaccaaccgtCAGACGTGTCAGGATTGGCTGACGAGGATCCGCCTGGCTCTGATGAGGGTGGGGCTCATGTCCGGCCAGCCGGCGGTCACCATCCGTCACGGCTTCGACCTGCTCACCGAGATCAAGAACAGCAGTGCGCAGGGTCCTGAGATGGAGGTTCCCATCACCATGTTGGTGGAGGCTCTGTGTGAGCTGCGCTGTCCTGAAGCCATCCAGGGTCTGGCAGCGTGGAGTTTGGCCCACATGGGGAAGAGCGTGGCGTGGGTCGGCTCTGTAGCTCTGCAGGCCGAGGGGAAGTTTGAGAAAGCGGCTCTGGAATATCAGGAGCAGCTGTGCGCCGTCACGGGGGTCGACTGCTCCATCAAAGGCTTCGACAGATCCTTACTGAAGCTCACCAACTCGCCCACAGGCAACAACTCCAGTCCGAAACATACAGGAAACGgAGACATTAAGAAGACGGTGCTGTTGAAGTCCAGCGAGTGTTCCTCCGAGGTCCTGAACTTCCTGGCCAATAAGGCGTGCGAGTGTTACGTGGCTCTGAGCGACTGGGCGTCGGTGCAGGAGTGGCAGGCCAGCATGATGGCGCTGAAGAAGAACAGCAACAGCTCGGCAACCGTCAACCTCAAGACCGACTTCAACTACGTCAAagctctGAGCAGGTTTGAGGACGGAGATTTCCCAGAGTGCCGTGCGCAGTTGGAGCTGCTTCCTGGAGAAGATTACGGCCTCCTCAACTCCAGCACGAAGGACAAACTAGacctGAAGCGGCTCCTTCCTGCCGTACTCAGTCCTGATCCATCAGAGCTGCAGAAGGCCATCGAGGTTCAGCTGCTGAGGAGCGCTGTAGGAGCCAtcacatcagccaatcacgaGCAGGACCAGAAAGTTCTACCTTCATCAGACACCCTGGTGAAGTACCTGAAGCAGACGGGCCGGATCGCTCTGGGACCTCTGCGTCTGTCCACGCTCACCCTGTGTGACTCGCTGCCCACCCTCGGAACCCTGCAGCTCCACTGCACCAGCTCTTTGGAGACCTCGCTGTGCAGCCAGCACCCCTCTGAGGAATGTCTGATCCCGCTGTACAGCGACGCTCTGAGCACGTGTAAGCAGCAGGACGTTCAGCCGTGGCTCCACGCGCTCAGATACAGCACGTTTCAGAGGCAGCTCTTCCTGAAGCTCAGAGGCTCGTCAGGTCCTGTGGACTCTCACCTGGTGGAGCTGTGTCTGACGGCGGTGAAGTTTGCTCGTAAGCAGGGGAACATCGCGCTGGCCACGCGCCTCCTCGCTCAGTGCAGCAAACCGTCCGCCGACGACCCGGAGACCCCGGACCTGGTACAGAGCTTCAGGCAGCTGTCCCTAGAGGGCGCCGTGGCTGAGAAATGGGGACCTGAGCTGAAGATCGAAAGGGCAAAAGTGCTGTTCACTGCAGGTCAGTCCGTGGCTGCCATGGAGATGTTGAGCTCGTGTGCGCTGTCGTACTGCCGCTCGGGGAAGTGCGAGCGCGCCGCCTGCCGCTCCATCCTCACGCTGTGCAAGTGGCTGCTGGCCGACTGGAAGGACCTGACGCCTCAGCTCAAACAGGTGGTGAAGAGAAACAGCAGCGGCTCGCCTTCAGCCCTCAGCAAGAACATCGCCGCCCTGCTGGAGCTCCCCGTGGAGGAGCAGGGTATACTGCGCATCACCACGGAGACCACAGTGAGCGTAGGAGTCGGAGAAGCGGACTTTGTCCTGGGCCAGCTGTACCAGCTCTCTGCGAGCCAGGCGCCTGAAGTGGCCAAATCCTGGGCTGCTTTAGCGAGCTGGGCTTACAGATGGGGCCGGAAGGTCGTCGACAacgcaagTCAAGGAGAAGGGGTTCCTCTGCTGCCAGGAGAGAAGAAGGAGATCGAGGAGTTACTGCCGTCTGGCACCAGCGACGAGGACAAGGAGACGATTTTCAGCATCCTGGGCCAGGCCATGTGTCGACCAGCTGGAATTCAGGATGAGGACATGGCTCTGCAGAACGAAGAGGACGATGAGGACGACATGGTGGATGTGATCTGGAGGCAGCTGTTGAGCTCGTGCCCGTGGCTGGCGGAGGTGGAGGACGGCGTGACGGAGGGGCTGATCCGGGTGTGGAGGACGGTGGTGGACCGCATCTTCAGCCTCTACCGCGTCTCCTGCAGGGCTTATTTCACCTTCCTCAAGCTCAACGCCGGACAGACGCCCATCGACGAGGACGACCCCAAACTTCTGCTGCACCCTCAGGGCAGTAAGCAGAGCAGCGATGACGTGATCGTGATGGCGACGCTGCGCCTGCTGCGCCTGCTAGTGAAGCACGCCGGAGAGCTGAGGGAGGGGCTGGAGCTCGGCCTGGCCTCCACGCCCACCGCGCCCTGGAGAGgcATCATCCCGCAGCTGTTCTCCAGACTGAACCACCCCGAGGCCTACATCCGCCAGAGCATCTGCAGCCTGCTGTGTCGCGTAGCCCGGGACTCGCCACACCTCATCCTCTACCCCGCCATCGTCGGCTCCATCTCACTCGGGGGAGAGGCTCAGACCGCcggtaCGAAGCTGCCCTCGGCTCTGCCCACTCTGTTGGGGAACATGCCGGGCGAGGCTCTGTGTGTGGGCGAGAGCGAGGCCGGGAGTCCCCCTGCGTCTCAGGACAGCGGCCGAGGAGACGAGCTCGGTCTTTGTTCTATCGAGGACCAGGCCATGATGCAGGACTGCTACAGCAAGATCGTGGACACGCTCTCCGCAGCTAACCCCACCATGGTCCAGCAGgtgcagATGCTGGTCGGGGAGCTGCGCAGGGTCACGGTGCTGTGGGACGAGTTGTGGTTGGGCGtcctgcagcagcagcacatgCACGTCCTGCGCAGGATCCAGCAGCTCGAGGACGAAGTCAAGAGAGTCCAGAACAACAACACGCTGCGCAAGGAGGAGAAGGTGGCCATCATGAGGGAGAAACACTCGGCCCTGATGCGGCCCGTAGTCTTCGCTCTGGATCACGTGCGCAGCATCACTGCCGCCGCCGCAGAGACGCCTCACGAGACGTGGTTCCAGGAGACGTACGGAGACGCCATTCACAACGCTCTGGAGCGACTGAGGAACCCGCAGAACCCGGCCAACCCTGCTAACAGCTGGGTTCCGTTCAAACAGATCATGTTGAGTCTGCAGCAGCGAGCTCAGAAGCGAGCGAGTTATCTGCTGCGTCTGGAGGAGATCAGTCCTCGCCTGGGCTCCATGACGCACACGGAGATGGCTCTTCCAGGAGAGGTTTCTGCCACCGACGCCGTCACCATCCACAACGTCGGCGGCACCATCACCATCCTGCCCACCAAGACCAAGCCCAAAAAACTCTACTTCCTCGGCTCTGACGGCAAAAACTACCCGTACCTCTTCaaaggtttgGAGGATTTGCATTTAGACGAGAGGATCATGCAGTTCTTGTCCATCGTTAACACCATGTTCACTAAAGTAAACCAGCAGGAGAGTCCACGCTTCCACGCCCGTCACTACTCGGTCACGCCCCTCGGCACTCGCTCGGGTCTCATCCAGTGGGTGGACGGAGCCACGCCTCTGTTCGGCCTCTACAAACGCTGGCAGCAGCGTGAGGCTGTGCTCCAGGCTCAGAAGGCTCAGGACTCGTTCCAGCAGCCGCAGAACCTGCCCATGGTTCCGCGCCCCAGCGAGCTCTACTACAGTAAGATCGGGCCGGCTCTGAAGGCGGTGGGACTCAGCCTGGACGTGTCGCGCCGTGATTGGCCGCTCAGCGTCATGAGGGACGTCCTGCGGGAGCTGAtggaggccacgccccctaacCTGCTGGCCAAGGAGCTGTGGTGCTCGTGTACCACGCCCAGCGAGTGGTGGAGGGTCACGCAGTCGTACGCCAGGTCCACTGCTGTGATGTCAATGGTGGGTTACATCATCGGTTTAGGAGACCGTCACCTGGACAACGTGCTGATCGACATGACGACCGGCGAGGTGGTGCACATCGACTACAACGTCTGCTTCGAGAAAGgGAAAAGTCTGAGGGTTCCGGAAAAGGTTCCTTTCCGTATGACGCACAACATCGAGACAGCGTTAGGAGTCACGGGAGTGGAAGGAATCTTCAGACTCTCCTGCGAACAGGTGATTCAGATGATGCGTCGGGGCAGAGAGACCCTCCTGACCCTGCTGGAGGCGTTTGTGTACGACCCCCTGGTGGACTGGACGGCGGGCGGAGAGGTGGGCTTCGCCGGCGCCGTGTACGGAGGAGGAGGACAGCAGGCCGAGAACAAGCAAAGcaagagggagatggagagggaCATCACGCGCAGCCTGTTCTCCTCACGCGTAGCCGAGATCAAGGTGAACTGGTTTAAGAACCGTGACGAGATGCAGGCGGTGCTGCCGCAGGTGGAGATGGCCGTGGAGGAGTACCTGAGTCTGCAGGAGCAGCTCGCTCAGGTGGACAAGGCGCAGGGCAAGCTGCTGGAGGAGATGGAGTTCCTGGAGGGAGCGGACAGCAGAGTGGACCACCCCATCCACACGCTGGAGCACAGATACTCGGAGCACACGCAGCTGCAGTCGAGGCAGAGGACCGTACAGGATGCCATCCAGAGCAAGCTGTCGGATCTGGACCAGTGGATCTCTCAGTACCAGGCGGCGTTCGGGAGTCTGGAGGCCACGCAGCTCGCCAGCCTgctgcaggagatcagcagcccCATAGACCTCGGTCCGCCCAGCTACGTCCCCGCTACAGCGTTTCTGCAGAACGCAGGTCAGGCTCATCTGATCAGCCAGTGCGAGGCTCTGGAGGCGGAGGTGAGCGCTCTCCTGCAGCAGCGCCGCTCCATACTGCGCGCCTGCCTCGAGCACCTGCACAGCTACGCCACCGTGGCCCTGCTGTACCCCCGCGCCGTCCTGCACCGCCACAGGGTCTACACCTGGAAGCAGTGGATGGAGGAGCTGGTGTGTGACATGACGGTGGAGCACTGCCAGGCCGTCTATCACCATTACGAGATGCAGTTTGCCCCCCAGCCGCCGGCCGCCACGTGTCAGTTCCTGTCGAGTGTGGAGATGGCGCTGCAGCACCACGCGGCGGAGACGAACACGCGCCTCCTGCGTCAGGTGGAGAGGCTGAAGGCGGAGGGAGCGAGCGTGCCCGTGTGTGAGGAGCAGCTGCAGGAGATCGAGCGCTGCATCAAGGTCTTCCTTCACGAGGACGCCGAGCTCGCCTCCTTCAGCCTGGCCGGGATCATCATCTCCGCCCTCTGCACTCTTACCAgGCGAAACCTGGTGATGGAGGGCGCGGCGGCGAGCGCAGGAGAGCAGCTGGTGGAGCTGACGTCCCGGGATGGAGCCTGGTTTCTGGAGGAGCTCTGCAGCATGAGTGGAAATGTCACGTGTCTGGTGCAGCTGCTGAAAGAGTGCCAGCTGCAGTCCCACGACCTGGACGTCCTCAGCCCCGAGGACACCTCGCAGGCCGTCTACCTGGCCAACGGAGTCTACACCTGCCTACAGGAGCTGAACACCAACTTCCGTCAGATCATCTTCCCCGAGGCTCTGCGCTGCATGCTGAAGGGAGAGAGCACTCTGGAGAGCATGCTGTCCGAGCTGGACTCTCTGATAGAGCAGTGTGCAGACGGCGTGTCCCTGCAGGGCCTGGGGGAGGCGCTGCAGGCTCACCTCCGCAACACCGCCATGGGGCTGGACGAGGACGCCGACGCACACTACCTCGAGGTCACCAGGGTTCTGCGTGTGCAGTATTCGGAGCTGATTCAGCCTCGGAACATGGAGGGCTCCGTACAGGACACGCCTAAAATGAGCGCGGGGCAGATGCTGCTGGTGGCCTTCGATGGGATGTTCGCTCAGCTGGAGAGCGCTTTCGGGCTCCTGATTGATAAGTTGAACTCCATGGATGTTCCTGCTGCTTGGAGGAAGGTGGATGTGATCTGGGAGGCTCGGGCCACGCAGGTGCATTTCTTTGACAGCGTGCAGACGCGGCAGGTCCTGGAGGAAATCTTCTTCCTCAAGAGGCTCCAAACGATCCGTGACTTCTTCCGGCTGTGTGCCTCGTTCGCTCAGACGCTATCAGGCACCTGCCCTTCTCCCACTGACGACCCCCCGCCGTCTAACGGCCCCGTCACGTTAGTGAAGCCCATATACCGCGGCTCCACGGTGGTCAGCGAGGACCAGATGACGCGGCCCATCAAAGCGTTCACGGCAGACTTTGTGAGGCAGATGCTGATGGGTCTGCCCACTCAGGCTCTGGGCCTGGCTCTCTGCAGCGCCCTCAGTGCTCTCGGCACAGACCTCATCGCTCAGGTCGAGGCTAAAGACTTCGGCGCCGAGGGGAAGGTGTCTCTGGACGACCTGTGTAAGAAGGCGGTGGAGCAGGGCGTCCAGGCGGGACGGATCTCCCAGCTGCTGCTGAACAGAGCCACGGTGCTGGCCAGCTCCTACGACACGGCGTGGAAGAAACTGGACCTGGTGCGCCGTCTGGAGCTCAGCATAGACGCCTGCAAGGTCAGCCTGCAGAGGGCGCAGCTGCACATCGCCATGTTCCAGTGGCAGCACGAGGACGTTCTCGGGACTCGCTCTCAGCCCATGACGGTCAGCCCTCCGCCTCGCTCCATCATCCTCAGCAACATGAAGAAGAAGCTGTACAAGCTCAGCCAGGACGACGCGGCCATCGCCAGCGTTCAGGAGAAACTGGCGTCGCTCGAGGGCAGCATTGAGCAGCGGTTGAAGTGGGCGGGCGGAGCAAACCCGGCTCTGGCGCCCGTGCTGCAGGACTTTGAGAGCACCATCACTGAGCGGCGTGCCCTAGTGGTGAAGGAGAGTCAGCGCGCCACTCAGGTCACCTTCCTCTGCAGCACCGTGCTCAACTTCGAGGGCCTTCGCACGCGCACCCCCGAGGCCCTGAGCATGGACGCCGCTCTGTTCGACCTGGTGAAGCGCTGCCAGGCCACGTGCTCCTACGCCGCCCAGTTCAGCACCTCCGTCTCCTCTCTGGAGCTGCAGCTTCTCCACAGACTGagTCCCGTGATGGAGCTGTCTATCGGCGCCCCCGAGTGGTTGGCGTGCGCTCAGAAGCACCTGTCTCAGGAGATGGCGAGTCAGAGGGCGGTGCAGGAGGAACGCGAGCAGCAGCTGGACTCGGTCACTGAAACCCTGCAGCTGCTGGTGGACACCATTAAAGGCACCCTGTCCAATCACAACCGCCTACTGGCTGACGTCAAGCACCTGCTGCGCGCCATGGCCaaggATGAGGAAAGCGCTCTTGCAGACGGAGAGGAAGTGATGTATGAGGGCAGTGTGCGTCAGTTCCTGTGCGAGTACAAGGCGTGGCAGGATAACGTGCAGATCGTGCTGTTCACGGTGGTGCAGGCGACGGGGCAGCCGCGCAGCGTGGAGCAGGTGGAGCTGCTGCAGATTCCCTCCACCCTCAAGGAGCTCAAAGGACAGAGCCAGAGcGTGTATAACGGCCTGGTTGGATTTGCGTCTCCCCTCGTCACTGACAAAGGAAGTGACTGTGCAAGCCCCACGTCAACCGTGCAGACGAGCTTCGCCGCCGcggTGCGATGCAGTGGCGTGAAGACGCAGCCTGACAGCATGTCTCAGAACGCTCGCAAAGCCCTTCCTCGCAACCTGGGGACCCCGGCAGACACCCCGCCCAGCACCCTGCTCATCGCCAACAAAAGCCTGGCCCCGAGCCCCAAACGCACCGTCAGGGACCCGAAAACcggcagagctGTGCAAGAGAGAAACTCGTACGCTGTGAGTGTTTGGAAGAGAGTGAAGGCGAAGCTGGAAGGGCGGGACGTGGATCCGAACCGGAGAATGAGCGTCACCGAGCAGGTGGATTACGTCATCAAGGAAGCCACGAACCTGGACAACCTGGCGCAGCTGTACGAAGGCTGGACGGCGTGGGTGTGAACGGGGATTTCCGCGTCGGTTCACTTCGGTTCCAGCGAGGGTTAGAAATCCACCAGAATCCACCGGGTCTGGGGCTTCGGAGCCACAGAGCTGCATGCGGGCAAAAAAAACCGGGGTTTGGGGGGGGCGTCGAGGCCCTCCCGTGCGCCCACACGGGACCTCCCCTCCCGTAGCACAGCAGCAGATCCAGCTAACACCAACGACACGATTCTCGGGTTTGCATCCGTCTCCCCGTAAACGTGCAAGGGGAGGGGGGAATACTGAGGACAGGGGGGGGGTGTGGGGGgggtgaggatgaggaggatgaggatgaggctCTTCCAGCTTTAACAACCCCCTCCCCCCAAACCAACCCCTGCTTCATCAGCGATAATAACGCCACGTCTGTCAGCTATCGATAACGAAGCTTGTGTTTTAGAGCAGGAGGCTCGTTGAGCGACACGCCTCTGGACTTCACTCGGGAGACGGGGGGCCGCGCTCCTCCCACCATCCTCTGGCCTCTGTTTTTGGATGGCTTTAGCGAGGGCGAGGTTGGGGCAGACGAGGCCGGCGTACACCGGGGCAGGTGCGCGAGGCTTTAAAGGGGGACTCCATTCAAAGCCAGACGGCCGTTGGCGGACCTGCGAgttctttaaatctttaaaaatctttaaaaatctttaaatcaagactgttttttttccccctttctcttttttgtcgGATGTTTATTCCAAAAATTACTTTACACACCTCAACTCCCTTCAGTGGAGattagtttaatattaaaaaaaaaaaaaaaaaaactgttttgggGGAAATTTGAATTCTTATGTTAGTGCTGGGTGTGAAGACATGACGTGCATCAGGCTGGTAAATGTTTCTTTGATCGATTGATGAGATTTAGAAAAGtttaagcatttattaaagCCCAAATTCGAATCTGATAATCTGTTCTAAAACTTGTTTTCAGAaatgctgcctttttttttttgtttgtttttgtttgtttcttctttctctttagtATGCATCTGTACGatttgttgtgtatttgtaGGTAGTTGGtatttttctccctctcccttctTCAGTAGCTGTTTAAATTAGCGTTAGCACCTTCTTTCGGCTTGCCTGTGAAAGTGTGTCATTGCTAATAAATATTCCCCACTTTGCTTGCGTTTTACTGATCTTGAtctagttttacatttttagtgGGGGGTGTTAAGTGGAttagtgctgtggtgatggtaGAAATGTTGTCTCTTAATGATTTTACTCCTTCATTTGACAAATAAATCTGGATTTCAACTGTTAA

Function

symbol description
smg1 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in TORC1 signaling and negative regulation of macroautophagy. Predicted to act upstream of or within nuclear-transcribed mRNA catabolic process, nonsense-mediated decay and phosphorylation. Predicted to be part of TORC1 complex and TORC2 complex. Predicted to be active in nucleus. Orthologous to human SMG1 (SMG1 nonsense mediated mRNA decay associated PI3K related kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase SMG1 isoform X5

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K08873 SMG1; serine/threonine-protein kinase SMG1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310159.1 True 12319 mRNA 0.59 62 941020 997685

Neighbor

gene id symbol gene type direction distance location
syt17 syt17,LOC107729446,LOC107658452,LOC107732856,LOC107564007 coding upstream 29110 889261 ~ 911910 (+)
LOC113527857 itpripl2 coding upstream 58378 865213 ~ 882642 (+)
hsd3b7 hsd3b7 coding upstream 91140 812026 ~ 849880 (+)
kat8 kat8,LOC107658503,LOC107554120,LOC107582998 coding upstream 214735 717617 ~ 726285 (+)
si:dkey-16l2.16 si:dkey-16l2.16,LOC108280555,LOC108427354,LOC107729502,LOC107554119,LOC107658507 coding upstream 235567 690189 ~ 705453 (+)
arl6ip1 arl6ip1,LOC107658451,LOC107674170,LOC107732869 coding downstream 2404 1000089 ~ 1014745 (+)
elob tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344,LOC105012960 coding downstream 24241 1021926 ~ 1034215 (+)
LOC113528077 NA coding downstream 39466 1037151 ~ 1042450 (+)
LOC113528076 NA coding downstream 80754 1078439 ~ 1110138 (+)
coro1a LOC103035240,LOC108427335,LOC108280773,LOC107658445,LOC107729508 coding downstream 255842 1253527 ~ 1266121 (+)
G203357 NA non-coding upstream 56654 817391 ~ 884366 (+)
G203339 NA non-coding upstream 197280 741832 ~ 743740 (+)
G203321 NA non-coding upstream 202293 738339 ~ 738727 (+)
G203328 NA non-coding upstream 254390 679778 ~ 686630 (+)
G203303 NA non-coding upstream 309438 631290 ~ 631582 (+)
G203327 NA non-coding downstream 60994 1058679 ~ 1060521 (+)
LOC117598762 NA non-coding downstream 63505 1061190 ~ 1078426 (+)
G203385 NA non-coding downstream 112844 1110529 ~ 1110847 (+)
G203635 LOC108280870,LOC103034911 non-coding downstream 311712 1309397 ~ 1312989 (+)
G203647 NA non-coding downstream 364698 1362383 ~ 1441015 (+)
setd1a setd1a,LOC107737760,LOC107554121,LOC107729457 other upstream 134675 778840 ~ 806345 (+)
fus fus,LOC107658502,LOC107729526 other upstream 166770 753067 ~ 774250 (+)
si:dkey-16l2.17 LOC108280473 other upstream 208130 726729 ~ 732890 (+)
thoc6 thoc6,LOC107580143,LOC108280484,LOC107730738,LOC107689651,LOC106600718 other upstream 217328 666808 ~ 723692 (+)
armc5 armc5 other downstream 36651 1034336 ~ 1056334 (+)
paqr4a paqr4,LOC101165805,LOC105897660,LOC104930707,LOC108280840,LOC107658445,LOC106606885,LOC102784286 other downstream 222809 1220494 ~ 1237202 (+)
kmt5c LOC108280634 other downstream 355644 1353329 ~ 1361460 (+)
syt3 syt3,LOC107551154,LOC107563990,LOC107680842 other downstream 563839 1561524 ~ 1619974 (+)
ccndx LOC108280826 other downstream 885367 1883052 ~ 1889515 (+)

Expression


Co-expression Network