ezh1 (ezh1)


Basic Information

Item Value
gene id ezh1
gene name ezh1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 4527593 ~ 4549478 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310291.1
CGACGCTGCTAATAAACACGTCACCCCGAGCTCGGTCCGAGTCAGGCGAAGTGCGCAGCTCCAAATTGTGTAACTAACAGCCTCGGCATGCTCGCGGAGGCCCGAGGAGTTGTCGCGCGCACTCAGCAGTACCGGAAGGTTTCCGTGGGCGAGCTATCTGTGTTTTCGGTGCTGGGACGCCTTTGCTGCTGTTTTTCGGAGAGGGGGGACGCGGAGTTCTGCGCGTGAGCCGCTGGAGTGACGGCgatggaggtgatggaggaggCATCCGGCGCTCGCTTCTGCCCCACTAAAGCCCCGGGCAGCCTGATGAAGTGGAGGAAGAGGGTCAAGTCCGAGTACATGAGGCTCAGGCAGCTGAAGCGCTTCCGCAAGGCTGAGGAGGTGAAGGCTCTGTTCCTGTCAAACAGGCGTAAGATTGAGGGAAGGACCGACCTGTTAAATGAGGAGTGGTCTAAGCTCAGGATCCAGTCCATCCCTCTGTCCACACCGAGTGGCTCACTGGCCAGCAAGAAGCAGTGCATGGTGGAGTTCGGCTTTCCATCATTCCCCAGCCAGGCAGTTGCCATGAGACCCTTGACAACCGTTGCTGGGATACCATTCATGTACTCCTGGTCCCCCTTGCAGCAGAACTTCATGgtggagGATGAAACATTTTTGCACAACATCCCTTATATGGGTGATGAGGTACTGGAGCAGGACGAAGCTTTTCTTGAGGAGCTCATAGACAACTATGATGGAGTCCATGGGGATAgggACAGAGGCTTCATAAACGACGAGATCTTTAAGGAGCTAGTGGAGGCGCTCAGTCAGTATTCGGAtcaggatgaagaggaggagagcacggaggaggaagaggaggaggaagaggagaaagagcGATGCCTGAGGAAGAGCACAGGAGAGAGTCTGGCAGAGAACAAGGCCGGATCTCTGGCCTTTAAGAGGAAGCGCAGGAGAGTTGCTGAGGGCAGTGAGCTGTCTCTCAGTAAGAAAATCCCTCATGACAAGATCTTCACTGCTATTGCATCCATGTTCCCTTACAAAGGCACGACGGAGGAGCTCAAAGAGAAGTATAAGGACCTGCTGGAGCCGGCGAGTACAGTAAAGCTTCCTCCTCTCTGCACACCCAACATGGACGGCCCCTTCGCCAAGTCCGTGCAGCGAGAACAGAGTCTGCACTCCTTCCACACACTCTTCTGCCGCCGCTGCTTCAAATACGACTGCTTCCTCCACCcattCCATGCCTCCCCTAACGTCTATAAGAGGAAGACTAAAGAGATCCGGAAGGAGACGGAGCCCTGTGGATTAGACTGCTTCCTGCTACAGAAAGGAGCAAAAGAGTTTGCAGATCAGTACATGTTGAGGTCACGGAGATCTCGCCGGCGCCGTCGTCAGCCACGCCCTTCCAGCTCAACAGGCCCCGCCCCCTCAGGTTCAGCCGAGGAcagaaaagatggagagagtgacCATGAGACCACAAGTTCCtctgagggtaACTCTCGGTGTCCCACCCCCACTAAGCTGAGGCAGGGTGAGGAGCTGATGGAGGAAGGCGAGGCTCCTCTGCAGTGGAGCGGCGCAGACGAGTCGCTCTTCAGAGTTCTGCACGGCACGTACTACAACAACTTCTGCTCCATCGCACGCCTCCTAGGCACCAAGACCTGCaaacaggtatacGAGTTTGCTGTGAAAGAGGTTCTGATTCATCGAGTTCCTCTGGAAGATTTGGAGGCAGATCATGAGTTTAAGCCccaaaagagaagaaaagaaaaCAGGTTATGGGCCAAGATCCAGTTAAAAAAAGataattcATCCAATCAGGTGTACAACTACCAGCCATGTGACCACCCCGAGCATCCGTGCGACAGCTCGTGTCCGTGTGTGATGACCCAGAACTTCTGCGAGAAATTCTGCCAGTGCGATCAAGAGTGTCAGAACCGTTTCCCAGGCTGCCGCTGTAAGACGCAGTGTAACACTAAGCAGTGTCCGTGTTACCTGGCCGTGCGTGAATGTGACCCTGACCTCTGCTTGACCTGTGGAGCTTCGGACCGCTGGGACAGCAAACAGGTTTCCTGCAAGAACTGCAGCATCCAGAGAGGACTCAAAAAGCATCTGCTCCTGGCTCCGTCAGATGTAGCAGGATGGGGAACTTTCATCAAGGAGCCGGTTCAGAAAAACGAGTTCATCTCAGAGTATTGTGGAGAGCTTATTTCCCAAGATGAAGCAGACAGAAGAGGCAGAATCTACGACAAGTACATGTCCAGCTTCCTGTTCAACCTGAACAATGACTTTGTGGTGGACGCGACACGAAAAGGGAACAAGATTCGCTTCGCCAACCACTCAGTCAATCCAAACTGCTACGCAAAAGTCGTCATGGTGAATGGGGACCACCGCATCGGGATCTTTGCAAAACGGGCCATTCAGCAGGGAGAGGAGTTGTTTTTCGACTACAGGTACAGTCAAGCCGACGCTCTCAAATACGTGGGCATAGAGAGGGAGATCGACGTGGTCTGACTTTCCCACCTTCCGCCTTTCCTGCCCACAATGCACCTCTCCTCACTCAGGACCGCGGTTCTATAATGTGGCTGCCTGGATACATCTTCAGTTACAAGAAGGGATTCTGTGATGTCATAACATTGTAATAACGGTATGATATCAAAGAATCGCTCAtcacaaaatatcacaaaaaaaaaagaaaacaaaaaggtcATATAAAACgttctgtatttaaatatgGGGTTAATTGAGTTGTCTGAACTAGCGTGTCTGTTggtctgtaaaataaaaaggatGCTAGTGTTCTTATTAGAAATAACTCATACATGTCAATGATTCCCAAGAAAATTTGAAGgaaatcttaaaaatattttatacaaaagaGAATAGGCTATCTATTTTAGCTTATTCAAGTAGCTAATATGCTAATTAGTGGTGCATTAACATTCCCAGCTTAAGCTGACAGAAAACACAGGAATGCTAAACAAATACAATCTCCAGCTATAAGTTACAGACAGCCAAATGTGCTAACTTAGCAGTTTCGGTTATGCTAGCAGCATGTAGGTTAGTACAGGAAATAACAGTGTATGCTATTATACTAATACAAATGGCTCACATTCTACTAAGAACATTAGCTAGACATGAATGGTAGCACTTGCTACAGAGCTAGCGTATGGATGATtagcaaagtaaaaaaaaaaaaattacttcaaaTAGCAGTGTCCTTTCCATtactcatatttttttttctgacaagaAAGCATCAAAAGCTGCTAGTTTGGCTCATCTGGAGCAGAGAGCGTTCTTCACTTCAGTTAACCTTTTCACGTTGTGGTAAAATCTGTACACAAGCTTCTGACTAGCGATTTTAGCATCCCAATATACGCTACATAATGTATAGTTGCAAACTAGGAGACATATTTATGGTTGCTGTTAGTTTTGGTCAGTTTATTCACACGGAAATGAATGAACTTCACATCTGCAATAATGTTATCTTTAGTTATGATGCAGTGTACTGTAATGTTAGCTTGTTCCTCTAATCTGCAAAGCTTTGCCGTTTGCTACTTTGTCATTCAAGCtatattttttagaaatgtttctaTAATGCCGCCATCTCATATCAGCTACGCTAATCAGTATCTAACCGGGATCCCTGGCTATTCCAGCGCTAAGTATCTTGGCTGTGGCTAACTATGTAGCGCAAACATATACTTATTTGTAAGAGATAAACTAGTGACAGTCACGGGTATccacagggttgccaggtctcagaaATTCTAGAATCTCAAAAAACGCacaaagacctgaaactagcccaaaaaagTCAGGAATTAGAATCAGGAAGAATTTCTGATAGACAGTATCTGCAATACACCTTTTTACTCACCTGGCACAGACATTGTCCTCTCCATAATCTCCCTTTCTTTGCAATAGATCTTAAGACAGAagtggttctgtacatcatagatacattgtctgcacttacactttccctttgtttgcaaTTGCCTATGTTTGGATATTAGATTTCATTataaatttgctttaaaacaagaaggaaaaaaaaaaaaacactacatatgttttaaaaaaaaaaa

Function

symbol description
ezh1 Predicted to enable histone-lysine N-methyltransferase activity. Predicted to act upstream of or within histone H3-K27 methylation. Predicted to be located in nucleus. Is expressed in several structures, including blastomere; eye; gonad; gut; and pectoral fin bud. Orthologous to human EZH1 (enhancer of zeste 1 polycomb repressive complex 2 subunit).

NR:

description
PREDICTED: histone-lysine N-methyltransferase EZH1 isoform X1

GO:

id name namespace
GO:0003682 chromatin binding molecular_function
GO:0018024 histone-lysine N-methyltransferase activity molecular_function

KEGG:

id description
K17451 EZH1; [histone H3]-lysine27 N-trimethyltransferase EZH1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310291.1 True 4097 mRNA 0.47 20 4527593 4549478

Neighbor

gene id symbol gene type direction distance location
moto meioc coding upstream 301548 4215915 ~ 4226045 (+)
ccdc47 ccdc47,LOC107674171,LOC107729550,LOC107721963,LOC107658463 coding upstream 396118 4120854 ~ 4131475 (+)
kcnh6a kcnh6a,kcnh6,LOC108279946,LOC108427397 coding upstream 422839 4057751 ~ 4104754 (+)
gfap gfap,LOC107729544 coding upstream 483218 4034566 ~ 4044375 (+)
LOC117598989 LOC108191637 coding upstream 497143 4029809 ~ 4030450 (+)
fmnl1a LOC108278868,LOC107654518,LOC107601298,LOC107721528,LOC108427416,LOC107720013 coding downstream 187563 4737041 ~ 4770496 (+)
LOC113528572 NA coding downstream 421344 4970822 ~ 4974830 (+)
wnt9b wnt9b,LOC108259511,LOC107721476,LOC108427420,LOC107601233 coding downstream 432548 4982026 ~ 4991251 (+)
map3k14a LOC108259239 coding downstream 508444 5057922 ~ 5078370 (+)
rps11 rps11,LOC107674708 coding downstream 539785 5089263 ~ 5091817 (+)
G205263 NA non-coding upstream 133335 4393925 ~ 4394258 (+)
G205250 NA non-coding upstream 167219 4359405 ~ 4360374 (+)
G205245 NA non-coding upstream 171057 4356318 ~ 4356536 (+)
G205242 NA non-coding upstream 171407 4355539 ~ 4356186 (+)
G204965 NA non-coding upstream 335494 4191737 ~ 4192099 (+)
G205299 NA non-coding downstream 83 4549561 ~ 4551865 (+)
G205306 NA non-coding downstream 13930 4563408 ~ 4563654 (+)
G205315 NA non-coding downstream 122282 4671760 ~ 4673029 (+)
G205436 NA non-coding downstream 345062 4894540 ~ 4997796 (+)
LOC117598842 NA non-coding downstream 374436 4923914 ~ 4925682 (+)
limd2 limd2,LOC107674139,LOC107658411 other upstream 541309 3966733 ~ 3986284 (+)
trnae-cuc_26 NA other upstream 556343 3971179 ~ 3971250 (+)
glyr1 glyr1,LOC107688117,LOC107590383,LOC107721499 other upstream 866429 3534289 ~ 3661164 (+)
LOC113527909 NA other upstream 1327460 3192704 ~ 3200133 (+)
pyya LOC108276154,LOC108434917 other upstream 1514734 3003608 ~ 3012859 (+)
plekhh3 plekhh3,LOC107601293,LOC107720008,LOC107688129 other downstream 70740 4620218 ~ 4670646 (+)
retreg3 fam134c other downstream 142999 4692477 ~ 4711316 (+)
psmc3ip psmc3ip other downstream 163395 4712873 ~ 4721468 (+)
gosr2 gosr2,LOC107654523,LOC102776032,LOC106601130 other downstream 454070 5003548 ~ 5014516 (+)
G206166 NA other downstream 1108134 5657612 ~ 5660848 (+)

Expression


Co-expression Network