LOC113528659


Basic Information

Item Value
gene id LOC113528659
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 1499515 ~ 1499605 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003402974.1
AGTCTCTGATGATGCTTTGCACTGGGCTCAGACAATCCGTGGCGATAAACGTGCAGCTCTGCTTCTTGACATGGCAGAGTCTGAAGAGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003402974.1 True 91 ncRNA 0.51 1 1499515 1499605

Neighbor

gene id symbol gene type direction distance location
LOC113528660 NA coding downstream 165 1499261 ~ 1499350 (-)
LOC113527946 LOC108280870,LOC103034911 coding downstream 183340 1309888 ~ 1316175 (-)
LOC113528189 NA coding downstream 193152 1302401 ~ 1306363 (-)
LOC113525779 NA coding downstream 205276 1282400 ~ 1294239 (-)
LOC113528234 NA coding downstream 219963 1268382 ~ 1279552 (-)
mybpc2a mybpc2,LOC107729557,LOC107680879,LOC107732898 coding upstream 267701 1767306 ~ 1812044 (-)
akt1s1 akt1s1,LOC107564011,LOC107680841 coding upstream 342384 1841989 ~ 1859709 (-)
aoc2 LOC108276610 coding upstream 726006 2225611 ~ 2233295 (-)
LOC113528224 LOC108276032 coding upstream 770066 2269671 ~ 2283303 (-)
LOC117598982 LOC108276075,LOC108276032 coding upstream 789812 2289417 ~ 2304449 (-)
G203739 NA non-coding downstream 42117 1455187 ~ 1457398 (-)
G203630 NA non-coding downstream 258326 1238164 ~ 1241189 (-)
G203609 NA non-coding downstream 388203 1111087 ~ 1111312 (-)
G203559 LOC108280785 non-coding downstream 455868 1041491 ~ 1043647 (-)
G203577 smg1 non-coding downstream 518500 980372 ~ 981015 (-)
G203756 NA non-coding upstream 7596 1507201 ~ 1527141 (-)
LOC117599001 NA non-coding upstream 26058 1525663 ~ 1528233 (-)
LOC117598750 NA non-coding upstream 218408 1718013 ~ 1718791 (-)
G204080 NA non-coding upstream 231396 1731001 ~ 1731200 (-)
G204084 NA non-coding upstream 235913 1735518 ~ 1735720 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other downstream 154344 1265662 ~ 1345171 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other downstream 368965 1126684 ~ 1130550 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other downstream 432695 947730 ~ 1066820 (-)
G203544 NA other downstream 588287 910117 ~ 911228 (-)
LOC117598979 NA other downstream 745693 750063 ~ 753822 (-)
LOC113527889 LOC108278777 other upstream 491568 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 566283 2065888 ~ 2077477 (-)
ifi35 ifi35 other upstream 612840 2112445 ~ 2195540 (-)
LOC113528223 LOC108276032,LOC108261353,LOC108261342 other upstream 832071 2331676 ~ 2344912 (-)
LOC113528062 LOC108276032,LOC108276106 other upstream 933544 2433149 ~ 2538111 (-)

Expression


Co-expression Network