LOC113528660


Basic Information

Item Value
gene id LOC113528660
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 1499261 ~ 1499350 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003402975.1
TTGCTCCGGTGATGTTTTGCACTGGGCTCTGAATGATTGTGGAGACAGAAGTGCAGCTCCGCTCCTGACATGGCGGAGTCtgaggagacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003402975.1 True 90 ncRNA 0.56 1 1499261 1499350

Neighbor

gene id symbol gene type direction distance location
LOC113527946 LOC108280870,LOC103034911 coding downstream 183086 1309888 ~ 1316175 (-)
LOC113528189 NA coding downstream 192898 1302401 ~ 1306363 (-)
LOC113525779 NA coding downstream 205022 1282400 ~ 1294239 (-)
LOC113528234 NA coding downstream 219709 1268382 ~ 1279552 (-)
LOC113528093 LOC108280723 coding downstream 282695 1208175 ~ 1216566 (-)
LOC113528659 NA coding upstream 165 1499515 ~ 1499605 (-)
mybpc2a mybpc2,LOC107729557,LOC107680879,LOC107732898 coding upstream 267956 1767306 ~ 1812044 (-)
akt1s1 akt1s1,LOC107564011,LOC107680841 coding upstream 342639 1841989 ~ 1859709 (-)
aoc2 LOC108276610 coding upstream 726261 2225611 ~ 2233295 (-)
LOC113528224 LOC108276032 coding upstream 770321 2269671 ~ 2283303 (-)
G203739 NA non-coding downstream 41863 1455187 ~ 1457398 (-)
G203630 NA non-coding downstream 258072 1238164 ~ 1241189 (-)
G203609 NA non-coding downstream 387949 1111087 ~ 1111312 (-)
G203559 LOC108280785 non-coding downstream 455614 1041491 ~ 1043647 (-)
G203577 smg1 non-coding downstream 518246 980372 ~ 981015 (-)
G203756 NA non-coding upstream 7851 1507201 ~ 1527141 (-)
LOC117599001 NA non-coding upstream 26313 1525663 ~ 1528233 (-)
LOC117598750 NA non-coding upstream 218663 1718013 ~ 1718791 (-)
G204080 NA non-coding upstream 231651 1731001 ~ 1731200 (-)
G204084 NA non-coding upstream 236168 1735518 ~ 1735720 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other downstream 154090 1265662 ~ 1345171 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other downstream 368711 1126684 ~ 1130550 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other downstream 432441 947730 ~ 1066820 (-)
G203544 NA other downstream 588033 910117 ~ 911228 (-)
LOC117598979 NA other downstream 745439 750063 ~ 753822 (-)
LOC113527889 LOC108278777 other upstream 491823 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 566538 2065888 ~ 2077477 (-)
ifi35 ifi35 other upstream 613095 2112445 ~ 2195540 (-)
LOC113528223 LOC108276032,LOC108261353,LOC108261342 other upstream 832326 2331676 ~ 2344912 (-)
LOC113528062 LOC108276032,LOC108276106 other upstream 933799 2433149 ~ 2538111 (-)

Expression


Co-expression Network