trnad-guc_6


Basic Information

Item Value
gene id trnad-guc_6
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 24864647 ~ 24864718 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnad-guc_6
TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnad-guc_6 True 72 tRNA 0.60 1 24864647 24864718

Neighbor

gene id symbol gene type direction distance location
emp2 emp2 coding downstream 12239 24833078 ~ 24852408 (-)
clcn7 clcn7,LOC107738625 coding downstream 345502 24499286 ~ 24519145 (-)
arhgdig arhgdib,gdir2,LOC108432841,LOC107590585,LOC107685923,LOC107568023,LOC106601960 coding downstream 367857 24470043 ~ 24496790 (-)
eci1 eci1 coding downstream 394955 24462546 ~ 24469692 (-)
nat15 naa60,nat15,LOC107690248,LOC107568044 coding downstream 408458 24446215 ~ 24456189 (-)
socs1a socs1 coding upstream 144943 25009661 ~ 25011832 (-)
tmc5 tmc5 coding upstream 184301 25049019 ~ 25153814 (-)
rps15a rps15a,RPS15A,LOC107686992,LOC106589173 coding upstream 397343 25262061 ~ 25268461 (-)
LOC113523798 NA coding upstream 777190 25641908 ~ 25645076 (-)
si:ch73-359m17.9 NA coding upstream 783605 25648323 ~ 25650033 (-)
G216541 NA non-coding downstream 129020 24735417 ~ 24735627 (-)
G216528 NA non-coding downstream 183420 24680547 ~ 24681227 (-)
G216343 NA non-coding downstream 468281 24385624 ~ 24396366 (-)
G216375 NA non-coding downstream 484454 24226552 ~ 24380193 (-)
G216627 NA non-coding upstream 63928 24928646 ~ 24929184 (-)
G216722 NA non-coding upstream 124483 24989201 ~ 24989524 (-)
G216727 NA non-coding upstream 128565 24993283 ~ 25014721 (-)
G216744 NA non-coding upstream 156684 25021402 ~ 25021732 (-)
G216758 NA non-coding upstream 180721 25045439 ~ 25045911 (-)
grin2aa grin2a,LOC107690256,LOC107685916,LOC107568390 other downstream 60307 24681237 ~ 24804340 (-)
usp7 usp7 other downstream 276197 24540772 ~ 24588450 (-)
LOC113546965 dgkq,LOC107595737,LOC107749781,LOC107587098 other downstream 1475388 23356153 ~ 23389259 (-)
fam193b fam193b,LOC107579325 other downstream 1536705 23312886 ~ 23327942 (-)
G215624 LOC108277208 other downstream 1707981 23134919 ~ 23156666 (-)
dexi dexi,LOC107590611,LOC107733843,LOC107567922 other upstream 56136 24920854 ~ 24923257 (-)
LOC113523780 LOC108259106,LOC107654745,LOC107710331,LOC107602379,LOC108412590 other upstream 630031 25494749 ~ 25519446 (-)
LOC117598996 NA other upstream 970985 25835703 ~ 25893695 (-)
sult3st1 NA other upstream 1152697 26017415 ~ 26027995 (-)
LOC113523797 LOC108276319,LOC108436680,LOC107723206,LOC107582973,LOC107554143,LOC107695115,LOC107689629 other upstream 1312494 26177212 ~ 26264891 (-)

Expression


Co-expression Network