G114013


Basic Information

Item Value
gene id G114013
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 12423728 ~ 12424057 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU134600
ccggtacttcattgttcccaagaaggggggagggctgcgtcccattttggacttgcggcaattgaacctctcagttgcacgactgaagttcaggatgcttacggtcactcaggtcgtgtctcagatcaggtccgaggactggtttgtcacgatcgacctaaaagatgcgtatttccacatctccatccttccccctcacaggaagttcctgaggttcactttcgggggcgaagcttaccagtatcaggttcttcccttcggcctagcactcccaccccgcaccttcacgaagtgcgtggatgctgccttggctcctatgcgactacaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134600 True 330 TUCP 0.55 1 12423728 12424057

Neighbor

gene id symbol gene type direction distance location
LOC117597734 NA coding downstream 113565 12298166 ~ 12310163 (-)
hdac3 hdac3 coding downstream 360591 12025781 ~ 12063137 (-)
LOC113542750 LOC108268434,LOC108436714 coding downstream 880004 11481891 ~ 11543724 (-)
LOC113542810 zc4h2,LOC108269407,LOC108436709,LOC103036162 coding downstream 1024832 11388502 ~ 11398896 (-)
asb12b asb12 coding downstream 1052535 11368194 ~ 11371193 (-)
btk btk,LOC107554824 coding upstream 13782 12437839 ~ 12492799 (-)
atoh8 atoh8,LOC107677004,LOC107753212,LOC107571829 coding upstream 103434 12527491 ~ 12549293 (-)
spdl1 spdl1 coding upstream 157399 12581456 ~ 12662949 (-)
hspa9 hspa9,LOC106604950 coding upstream 437593 12861650 ~ 12904853 (-)
LOC113529411 hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 coding upstream 638281 13062338 ~ 13063432 (-)
G114001 NA non-coding downstream 44235 12379277 ~ 12379493 (-)
G113961 NA non-coding downstream 45948 12377313 ~ 12377780 (-)
G113985 NA non-coding downstream 131264 12291992 ~ 12292464 (-)
G113979 NA non-coding downstream 140674 12278822 ~ 12283054 (-)
G113972 NA non-coding downstream 160558 12258215 ~ 12263170 (-)
LOC117597691 NA non-coding upstream 77123 12501180 ~ 12503970 (-)
G114095 NA non-coding upstream 85813 12509870 ~ 12512353 (-)
G114096 NA non-coding upstream 88772 12512829 ~ 12514622 (-)
G114103 NA non-coding upstream 94598 12518655 ~ 12522672 (-)
G114169 NA non-coding upstream 140691 12564748 ~ 12564968 (-)
G113959 csnk1a1,LOC106604944 other downstream 54785 12321331 ~ 12368943 (-)
LOC113542864 LOC108427892,LOC108268827,LOC107740141,LOC107593202,LOC106612226,LOC107554835 other downstream 248823 12169629 ~ 12174905 (-)
LOC117597634 LOC101884462,LOC101885893 other downstream 311512 12079524 ~ 12112216 (-)
G113674 NA other downstream 565712 11818878 ~ 11858016 (-)
G113516 NA other downstream 811159 11611973 ~ 11612569 (-)
timm8a timm8a,LOC107742474,LOC107680336,LOC107593201 other upstream 76883 12500940 ~ 12504810 (-)
G114097 NA other upstream 92301 12516358 ~ 12518194 (-)
G114215 NA other upstream 270714 12694771 ~ 12695509 (-)
fbxo38 fbxo38 other upstream 510500 12934557 ~ 13027955 (-)
G114460 NA other upstream 1123455 13547512 ~ 13550775 (-)

Expression


Co-expression Network