G114215


Basic Information

Item Value
gene id G114215
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 12694771 ~ 12695509 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU134829
aacaatgtaaaaaaaacactattaaaGGTATGTCATGCAGCCtcatgcatgatttttttttttgaaaaaatgctTTTGTGAAGTCCAAGTGCCTTGaaacttaaaattaaaacatattacCAATATGTATAAtaacactatattaccaaaagtattcggtcacccatccaaatgatcagaatcaggtgtcctaatcacttggcctggccacaggtgtataaaatcaagcacttaggcatgcagactgtttttacaaacatttgtgaaagaatgggccgctctcaggagctgagtgaattccagcgtggaactgtcataggatgcgaCCTGTgtaacaaatccagtcgtgaaatttcttcgctcctaaatattccacagtcaactgtcagctttatcataacaaaatggaagagtttgggaacaacagcaactcagccacgaagtggtaggccacgaaaactgacggagaggggtcagcggatgctgaagcgcatagtgcaaagaggtcgtcgactttcttcacagtcaattgctacagagctccaaacttcacgtgaccttcagattagcccaagtacagtacgcagagagcttcatggaatgggtttccatggccgagcagctgcatccaagccacacatcaccaagtgcaatgcaaagcgtcggatgcagtggtgtaaagcacgccgccactggactctagagcagtggagacgcgttctctggagtgatgaatcac

Function

NR:

description
PREDICTED: glutamate decarboxylase 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134829 True 739 TUCP 0.44 1 12694771 12695509

Neighbor

gene id symbol gene type direction distance location
spdl1 spdl1 coding downstream 31822 12581456 ~ 12662949 (-)
atoh8 atoh8,LOC107677004,LOC107753212,LOC107571829 coding downstream 145478 12527491 ~ 12549293 (-)
btk btk,LOC107554824 coding downstream 201972 12437839 ~ 12492799 (-)
LOC117597734 NA coding downstream 384608 12298166 ~ 12310163 (-)
hdac3 hdac3 coding downstream 631634 12025781 ~ 12063137 (-)
hspa9 hspa9,LOC106604950 coding upstream 166141 12861650 ~ 12904853 (-)
LOC113529411 hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 coding upstream 366829 13062338 ~ 13063432 (-)
elf1 elf4 coding upstream 1473326 14168835 ~ 14208465 (-)
trnae-uuc_1 NA coding upstream 1513407 14208916 ~ 14208987 (-)
drp2 drp2,LOC107724836 coding upstream 1551563 14247072 ~ 14383606 (-)
LOC117597685 LOC107701872 non-coding downstream 3364 12676968 ~ 12691407 (-)
G114183 NA non-coding downstream 29700 12664754 ~ 12665071 (-)
G114176 NA non-coding downstream 105146 12572347 ~ 12589625 (-)
G114169 NA non-coding downstream 129803 12564748 ~ 12564968 (-)
G114103 NA non-coding downstream 172099 12518655 ~ 12522672 (-)
G114216 NA non-coding upstream 344 12695853 ~ 12696081 (-)
G114226 NA non-coding upstream 48963 12744472 ~ 12744681 (-)
G114227 NA non-coding upstream 49307 12744816 ~ 12745035 (-)
G114228 NA non-coding upstream 49626 12745135 ~ 12745387 (-)
LOC113542678 NA non-coding upstream 50473 12745982 ~ 12755475 (-)
G114097 NA other downstream 176577 12516358 ~ 12518194 (-)
timm8a timm8a,LOC107742474,LOC107680336,LOC107593201 other downstream 189961 12500940 ~ 12504810 (-)
G114013 NA other downstream 270714 12423728 ~ 12424057 (-)
G113959 csnk1a1,LOC106604944 other downstream 325828 12321331 ~ 12368943 (-)
LOC113542864 LOC108427892,LOC108268827,LOC107740141,LOC107593202,LOC106612226,LOC107554835 other downstream 519866 12169629 ~ 12174905 (-)
fbxo38 fbxo38 other upstream 239048 12934557 ~ 13027955 (-)
G114460 NA other upstream 852003 13547512 ~ 13550775 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 other upstream 1146110 13841619 ~ 13915588 (-)
G114873 NA other upstream 1524807 14220316 ~ 14221855 (-)
ebf1a ebf1,ebf1a,LOC105011268 other upstream 1974680 14670189 ~ 14775493 (-)

Expression


Co-expression Network