G114284


Basic Information

Item Value
gene id G114284
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 12911699 ~ 12911903 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU134902
gtggcctaatggttagagacttGGACTTGCAACTCGAAgatgaacctgaaggtcgtgggttcgagtctcaggtccagcagggattgtaggtggggggagtgaatgaccagcgctctctcccaccctcaataccacgactgaggtgagacccttgagcaaggcaccgaacccccaactgctccccgggcgccgcagcaaaaggctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134902 True 205 lncRNA 0.59 1 12911699 12911903

Neighbor

gene id symbol gene type direction distance location
hspa9 hspa9,LOC106604950 coding downstream 6846 12861650 ~ 12904853 (-)
spdl1 spdl1 coding downstream 248750 12581456 ~ 12662949 (-)
atoh8 atoh8,LOC107677004,LOC107753212,LOC107571829 coding downstream 362406 12527491 ~ 12549293 (-)
btk btk,LOC107554824 coding downstream 418900 12437839 ~ 12492799 (-)
LOC117597734 NA coding downstream 601536 12298166 ~ 12310163 (-)
LOC113529411 hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 coding upstream 150435 13062338 ~ 13063432 (-)
elf1 elf4 coding upstream 1256932 14168835 ~ 14208465 (-)
trnae-uuc_1 NA coding upstream 1297013 14208916 ~ 14208987 (-)
drp2 drp2,LOC107724836 coding upstream 1335169 14247072 ~ 14383606 (-)
cenpi cenpi coding upstream 1471836 14383739 ~ 14398448 (-)
LOC113542678 NA non-coding downstream 156224 12745982 ~ 12755475 (-)
G114228 NA non-coding downstream 166312 12745135 ~ 12745387 (-)
G114227 NA non-coding downstream 166664 12744816 ~ 12745035 (-)
G114226 NA non-coding downstream 167018 12744472 ~ 12744681 (-)
G114216 NA non-coding downstream 215618 12695853 ~ 12696081 (-)
G114299 NA non-coding upstream 100714 13012617 ~ 13012844 (-)
G114302 NA non-coding upstream 102669 13014572 ~ 13015871 (-)
G114314 LOC107721237 non-coding upstream 117955 13029858 ~ 13030120 (-)
G114313 NA non-coding upstream 145802 13057705 ~ 13058683 (-)
G114375 NA non-coding upstream 203846 13115749 ~ 13121619 (-)
G114215 NA other downstream 216190 12694771 ~ 12695509 (-)
G114097 NA other downstream 393505 12516358 ~ 12518194 (-)
timm8a timm8a,LOC107742474,LOC107680336,LOC107593201 other downstream 406889 12500940 ~ 12504810 (-)
G114013 NA other downstream 487642 12423728 ~ 12424057 (-)
G113959 csnk1a1,LOC106604944 other downstream 542756 12321331 ~ 12368943 (-)
fbxo38 fbxo38 other upstream 22654 12934557 ~ 13027955 (-)
G114460 NA other upstream 635609 13547512 ~ 13550775 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 other upstream 929716 13841619 ~ 13915588 (-)
G114873 NA other upstream 1308413 14220316 ~ 14221855 (-)
ebf1a ebf1,ebf1a,LOC105011268 other upstream 1758286 14670189 ~ 14775493 (-)

Expression


Co-expression Network