Gene
RNA
| Item | Value |
|---|---|
| gene id | G114455 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 13532988 ~ 13533294 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135095 | True | 307 | lncRNA | 0.43 | 1 | 13532988 | 13533294 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113529411 | hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 | coding | downstream | 469556 | 13062338 ~ 13063432 (-) |
| hspa9 | hspa9,LOC106604950 | coding | downstream | 628135 | 12861650 ~ 12904853 (-) |
| spdl1 | spdl1 | coding | downstream | 870039 | 12581456 ~ 12662949 (-) |
| atoh8 | atoh8,LOC107677004,LOC107753212,LOC107571829 | coding | downstream | 983695 | 12527491 ~ 12549293 (-) |
| btk | btk,LOC107554824 | coding | downstream | 1040189 | 12437839 ~ 12492799 (-) |
| elf1 | elf4 | coding | upstream | 635541 | 14168835 ~ 14208465 (-) |
| trnae-uuc_1 | NA | coding | upstream | 675622 | 14208916 ~ 14208987 (-) |
| drp2 | drp2,LOC107724836 | coding | upstream | 713778 | 14247072 ~ 14383606 (-) |
| cenpi | cenpi | coding | upstream | 850445 | 14383739 ~ 14398448 (-) |
| tmem35 | tmem35a,tmem35 | coding | upstream | 873064 | 14406358 ~ 14408931 (-) |
| G114451 | NA | non-coding | downstream | 26287 | 13506494 ~ 13506701 (-) |
| G114386 | NA | non-coding | downstream | 334788 | 13193655 ~ 13198200 (-) |
| G114390 | NA | non-coding | downstream | 342762 | 13189986 ~ 13190226 (-) |
| G114364 | NA | non-coding | downstream | 403399 | 13124566 ~ 13129589 (-) |
| G114375 | NA | non-coding | downstream | 411369 | 13115749 ~ 13121619 (-) |
| G114458 | NA | non-coding | upstream | 3932 | 13537226 ~ 13537527 (-) |
| G114459 | NA | non-coding | upstream | 4252 | 13537546 ~ 13537774 (-) |
| G114476 | NA | non-coding | upstream | 50213 | 13583507 ~ 13583743 (-) |
| G114529 | NA | non-coding | upstream | 137962 | 13671256 ~ 13671490 (-) |
| G114534 | NA | non-coding | upstream | 146013 | 13679307 ~ 13679518 (-) |
| fbxo38 | fbxo38 | other | downstream | 505033 | 12934557 ~ 13027955 (-) |
| G114215 | NA | other | downstream | 837479 | 12694771 ~ 12695509 (-) |
| G114097 | NA | other | downstream | 1014794 | 12516358 ~ 12518194 (-) |
| timm8a | timm8a,LOC107742474,LOC107680336,LOC107593201 | other | downstream | 1028178 | 12500940 ~ 12504810 (-) |
| G114013 | NA | other | downstream | 1108931 | 12423728 ~ 12424057 (-) |
| G114460 | NA | other | upstream | 14218 | 13547512 ~ 13550775 (-) |
| pcdh19 | pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 | other | upstream | 308325 | 13841619 ~ 13915588 (-) |
| G114873 | NA | other | upstream | 687022 | 14220316 ~ 14221855 (-) |
| ebf1a | ebf1,ebf1a,LOC105011268 | other | upstream | 1136895 | 14670189 ~ 14775493 (-) |
| tmsb2 | NA | other | upstream | 1547490 | 15080784 ~ 15082504 (-) |
