Gene
RNA
| Item | Value |
|---|---|
| gene id | G114739 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 13988570 ~ 13988810 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135395 | True | 241 | lncRNA | 0.50 | 1 | 13988570 | 13988810 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113529411 | hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 | coding | downstream | 925138 | 13062338 ~ 13063432 (-) |
| hspa9 | hspa9,LOC106604950 | coding | downstream | 1083717 | 12861650 ~ 12904853 (-) |
| spdl1 | spdl1 | coding | downstream | 1325621 | 12581456 ~ 12662949 (-) |
| atoh8 | atoh8,LOC107677004,LOC107753212,LOC107571829 | coding | downstream | 1439277 | 12527491 ~ 12549293 (-) |
| btk | btk,LOC107554824 | coding | downstream | 1495771 | 12437839 ~ 12492799 (-) |
| elf1 | elf4 | coding | upstream | 180025 | 14168835 ~ 14208465 (-) |
| trnae-uuc_1 | NA | coding | upstream | 220106 | 14208916 ~ 14208987 (-) |
| drp2 | drp2,LOC107724836 | coding | upstream | 258262 | 14247072 ~ 14383606 (-) |
| cenpi | cenpi | coding | upstream | 394929 | 14383739 ~ 14398448 (-) |
| tmem35 | tmem35a,tmem35 | coding | upstream | 417548 | 14406358 ~ 14408931 (-) |
| G114729 | NA | non-coding | downstream | 12644 | 13975725 ~ 13975926 (-) |
| G114707 | NA | non-coding | downstream | 78649 | 13908968 ~ 13909921 (-) |
| G114534 | NA | non-coding | downstream | 309052 | 13679307 ~ 13679518 (-) |
| G114529 | NA | non-coding | downstream | 317080 | 13671256 ~ 13671490 (-) |
| G114476 | NA | non-coding | downstream | 404827 | 13583507 ~ 13583743 (-) |
| G114761 | NA | non-coding | upstream | 45832 | 14034642 ~ 14034895 (-) |
| G115100 | NA | non-coding | upstream | 479440 | 14468250 ~ 14474465 (-) |
| G115143 | NA | non-coding | upstream | 551298 | 14540108 ~ 14540308 (-) |
| G115325 | NA | non-coding | upstream | 757129 | 14745939 ~ 14747993 (-) |
| G115329 | NA | non-coding | upstream | 796519 | 14785329 ~ 14786018 (-) |
| pcdh19 | pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 | other | downstream | 72982 | 13841619 ~ 13915588 (-) |
| G114460 | NA | other | downstream | 437795 | 13547512 ~ 13550775 (-) |
| fbxo38 | fbxo38 | other | downstream | 960615 | 12934557 ~ 13027955 (-) |
| G114215 | NA | other | downstream | 1293061 | 12694771 ~ 12695509 (-) |
| G114097 | NA | other | downstream | 1470376 | 12516358 ~ 12518194 (-) |
| G114873 | NA | other | upstream | 231506 | 14220316 ~ 14221855 (-) |
| ebf1a | ebf1,ebf1a,LOC105011268 | other | upstream | 681379 | 14670189 ~ 14775493 (-) |
| tmsb2 | NA | other | upstream | 1091974 | 15080784 ~ 15082504 (-) |
| apln | apln | other | upstream | 1528244 | 15517054 ~ 15540726 (-) |
| ndufa1 | NA | other | upstream | 1738840 | 15727650 ~ 15729388 (-) |
