Gene
RNA
| Item | Value |
|---|---|
| gene id | G114761 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 14034642 ~ 14034895 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135417 | True | 254 | lncRNA | 0.49 | 1 | 14034642 | 14034895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113529411 | hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 | coding | downstream | 971210 | 13062338 ~ 13063432 (-) |
| hspa9 | hspa9,LOC106604950 | coding | downstream | 1129789 | 12861650 ~ 12904853 (-) |
| spdl1 | spdl1 | coding | downstream | 1371693 | 12581456 ~ 12662949 (-) |
| atoh8 | atoh8,LOC107677004,LOC107753212,LOC107571829 | coding | downstream | 1485349 | 12527491 ~ 12549293 (-) |
| btk | btk,LOC107554824 | coding | downstream | 1541843 | 12437839 ~ 12492799 (-) |
| elf1 | elf4 | coding | upstream | 133940 | 14168835 ~ 14208465 (-) |
| trnae-uuc_1 | NA | coding | upstream | 174021 | 14208916 ~ 14208987 (-) |
| drp2 | drp2,LOC107724836 | coding | upstream | 212177 | 14247072 ~ 14383606 (-) |
| cenpi | cenpi | coding | upstream | 348844 | 14383739 ~ 14398448 (-) |
| tmem35 | tmem35a,tmem35 | coding | upstream | 371463 | 14406358 ~ 14408931 (-) |
| G114739 | NA | non-coding | downstream | 45832 | 13988570 ~ 13988810 (-) |
| G114729 | NA | non-coding | downstream | 58716 | 13975725 ~ 13975926 (-) |
| G114707 | NA | non-coding | downstream | 124721 | 13908968 ~ 13909921 (-) |
| G114534 | NA | non-coding | downstream | 355124 | 13679307 ~ 13679518 (-) |
| G114529 | NA | non-coding | downstream | 363152 | 13671256 ~ 13671490 (-) |
| G115100 | NA | non-coding | upstream | 433355 | 14468250 ~ 14474465 (-) |
| G115143 | NA | non-coding | upstream | 505213 | 14540108 ~ 14540308 (-) |
| G115325 | NA | non-coding | upstream | 711044 | 14745939 ~ 14747993 (-) |
| G115329 | NA | non-coding | upstream | 750434 | 14785329 ~ 14786018 (-) |
| G115331 | NA | non-coding | upstream | 768559 | 14803454 ~ 14804191 (-) |
| pcdh19 | pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 | other | downstream | 119054 | 13841619 ~ 13915588 (-) |
| G114460 | NA | other | downstream | 483867 | 13547512 ~ 13550775 (-) |
| fbxo38 | fbxo38 | other | downstream | 1006687 | 12934557 ~ 13027955 (-) |
| G114215 | NA | other | downstream | 1339133 | 12694771 ~ 12695509 (-) |
| G114097 | NA | other | downstream | 1516448 | 12516358 ~ 12518194 (-) |
| G114873 | NA | other | upstream | 185421 | 14220316 ~ 14221855 (-) |
| ebf1a | ebf1,ebf1a,LOC105011268 | other | upstream | 635294 | 14670189 ~ 14775493 (-) |
| tmsb2 | NA | other | upstream | 1045889 | 15080784 ~ 15082504 (-) |
| apln | apln | other | upstream | 1482159 | 15517054 ~ 15540726 (-) |
| ndufa1 | NA | other | upstream | 1692755 | 15727650 ~ 15729388 (-) |
