G114873


Basic Information

Item Value
gene id G114873
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 14220316 ~ 14221855 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU135547
cacttgaTTCTGCTCATGTGTATCTGAAGCCTATTCCAGATGCAATGCCTGTCCATTCCATGACACCACATTATaggacacactcattcacacctgggggcTCTTTAGAGTGGGAGGAAACTAAGGGTGCAACAATCCATCGATATAGATCGATGTATCTATCAAATAACCATCGATCTGATGTATCGATGCAAAACATAAACACTGACGCATGTATAATTTTTAAGATGGACTTTTATTTAGGACATCCCAGCCACGTCCCGGACGTGACGTCCGTCAAAGTTTAAGTTCATCACGGCTCCTTACTTGCACGAAATATGTAGCATTTCAAAGTGATACATATATGgtatcatcatgaaacttgTGATTTACACCcctacagaaaacacacacagggaaaacagagaagccagaggaaacacacacagggaaaacagagaagccagaggaaacacacacagggaaaacagagaagccagaggaaacacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagtgagaggaaacacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagcgagaggaaacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagtgagaggaaacacacacagggaaaacagagaagtgagaggaaacacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagtgagaggaaacacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagcgagaggaaacacacacagggaaaacagagaagtgagaggaaacacacagggaaaacaGAGAAgcgagaggaaacacacacagggaaaacagagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135547 True 966 TUCP 0.45 3 14220316 14221855

Neighbor

gene id symbol gene type direction distance location
trnae-uuc_1 NA coding downstream 11329 14208916 ~ 14208987 (-)
elf1 elf4 coding downstream 11851 14168835 ~ 14208465 (-)
LOC113529411 hnrnpa0b,LOC108269291,LOC107593199,LOC107740138,LOC107680986,LOC107554845 coding downstream 1156884 13062338 ~ 13063432 (-)
hspa9 hspa9,LOC106604950 coding downstream 1315463 12861650 ~ 12904853 (-)
spdl1 spdl1 coding downstream 1557367 12581456 ~ 12662949 (-)
drp2 drp2,LOC107724836 coding upstream 25217 14247072 ~ 14383606 (-)
cenpi cenpi coding upstream 161884 14383739 ~ 14398448 (-)
tmem35 tmem35a,tmem35 coding upstream 184503 14406358 ~ 14408931 (-)
arl13a arl13a coding upstream 194679 14416534 ~ 14423653 (-)
cstf2 cstf2,LOC107688691,LOC107680996,LOC107740160 coding upstream 232954 14454809 ~ 14464599 (-)
G114761 NA non-coding downstream 185421 14034642 ~ 14034895 (-)
G114739 NA non-coding downstream 231506 13988570 ~ 13988810 (-)
G114729 NA non-coding downstream 244390 13975725 ~ 13975926 (-)
G114707 NA non-coding downstream 310395 13908968 ~ 13909921 (-)
G114534 NA non-coding downstream 540798 13679307 ~ 13679518 (-)
G115100 NA non-coding upstream 246395 14468250 ~ 14474465 (-)
G115143 NA non-coding upstream 318253 14540108 ~ 14540308 (-)
G115325 NA non-coding upstream 524084 14745939 ~ 14747993 (-)
G115329 NA non-coding upstream 563474 14785329 ~ 14786018 (-)
G115331 NA non-coding upstream 581599 14803454 ~ 14804191 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 other downstream 304728 13841619 ~ 13915588 (-)
G114460 NA other downstream 669541 13547512 ~ 13550775 (-)
fbxo38 fbxo38 other downstream 1192361 12934557 ~ 13027955 (-)
G114215 NA other downstream 1524807 12694771 ~ 12695509 (-)
G114097 NA other downstream 1702122 12516358 ~ 12518194 (-)
ebf1a ebf1,ebf1a,LOC105011268 other upstream 448334 14670189 ~ 14775493 (-)
tmsb2 NA other upstream 858929 15080784 ~ 15082504 (-)
apln apln other upstream 1295199 15517054 ~ 15540726 (-)
ndufa1 NA other upstream 1505795 15727650 ~ 15729388 (-)
G115842 dlg3,LOC107751999 other upstream 1629166 15851021 ~ 15852220 (-)

Expression


Co-expression Network