Gene
RNA
| Item | Value |
|---|---|
| gene id | G115100 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 14468250 ~ 14474465 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135784 | True | 243 | lncRNA | 0.40 | 2 | 14468250 | 14474465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cstf2 | cstf2,LOC107688691,LOC107680996,LOC107740160 | coding | downstream | 3651 | 14454809 ~ 14464599 (-) |
| arl13a | arl13a | coding | downstream | 44597 | 14416534 ~ 14423653 (-) |
| tmem35 | tmem35a,tmem35 | coding | downstream | 59319 | 14406358 ~ 14408931 (-) |
| cenpi | cenpi | coding | downstream | 69802 | 14383739 ~ 14398448 (-) |
| drp2 | drp2,LOC107724836 | coding | downstream | 84644 | 14247072 ~ 14383606 (-) |
| mid1ip1l | LOC108269374,LOC108427811,LOC107680990 | coding | upstream | 52294 | 14526759 ~ 14528538 (-) |
| tspan7 | tspan6 | coding | upstream | 55516 | 14529981 ~ 14535957 (-) |
| sytl4 | sytl4 | coding | upstream | 85769 | 14560234 ~ 14575623 (-) |
| trmt12 | trmt12 | coding | upstream | 101671 | 14576136 ~ 14585427 (-) |
| zbtb3 | zbtb3 | coding | upstream | 117159 | 14591624 ~ 14594659 (-) |
| G114761 | NA | non-coding | downstream | 433355 | 14034642 ~ 14034895 (-) |
| G114739 | NA | non-coding | downstream | 479440 | 13988570 ~ 13988810 (-) |
| G114729 | NA | non-coding | downstream | 492324 | 13975725 ~ 13975926 (-) |
| G114707 | NA | non-coding | downstream | 558329 | 13908968 ~ 13909921 (-) |
| G114534 | NA | non-coding | downstream | 788732 | 13679307 ~ 13679518 (-) |
| G115143 | NA | non-coding | upstream | 65643 | 14540108 ~ 14540308 (-) |
| G115325 | NA | non-coding | upstream | 271474 | 14745939 ~ 14747993 (-) |
| G115329 | NA | non-coding | upstream | 310864 | 14785329 ~ 14786018 (-) |
| G115331 | NA | non-coding | upstream | 328989 | 14803454 ~ 14804191 (-) |
| LOC113528719 | NA | non-coding | upstream | 533246 | 15007711 ~ 15016373 (-) |
| G114873 | NA | other | downstream | 246395 | 14220316 ~ 14221855 (-) |
| pcdh19 | pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 | other | downstream | 552662 | 13841619 ~ 13915588 (-) |
| G114460 | NA | other | downstream | 917475 | 13547512 ~ 13550775 (-) |
| fbxo38 | fbxo38 | other | downstream | 1440295 | 12934557 ~ 13027955 (-) |
| G114215 | NA | other | downstream | 1772741 | 12694771 ~ 12695509 (-) |
| ebf1a | ebf1,ebf1a,LOC105011268 | other | upstream | 195724 | 14670189 ~ 14775493 (-) |
| tmsb2 | NA | other | upstream | 606319 | 15080784 ~ 15082504 (-) |
| apln | apln | other | upstream | 1042589 | 15517054 ~ 15540726 (-) |
| ndufa1 | NA | other | upstream | 1253185 | 15727650 ~ 15729388 (-) |
| G115842 | dlg3,LOC107751999 | other | upstream | 1376556 | 15851021 ~ 15852220 (-) |
