ndufa1


Basic Information

Item Value
gene id ndufa1
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 15727650 ~ 15729388 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU136613
GGTGCGTGACCGTCAACTCAGCAGACATTTTGGGCAAAATAGGGGAGGACTTGCAAATTTCTCCCTTTATTAGCGCAGCAAGACAAGATCCTTGTTAAACTGCAGCTAATCACATTTTACCTTCATCATGTGGTATGAAATATTGCCCGGATTTGCTATAATGACGGTTTGTTTGATCGTTCCTGGAGTGGTCACTACTCACATACAGAAACTGACTAACGGTGGAAAGGAGAAGAGAATCGCAAGAGTTCCTTACCAGTGGTACTTGATGGAGAGAGACAAGCGGGTGTCAGGGACTGGACTGTATTACCAGTCAAAGggacttgaaaacattaaatgaagaTCATGCCATATCCCCTGCCCCTGTCCAAAAGTTTTGCAATGTGCATTTTGACCAACCatctattaaaataattta
>XM_026917784.2
CGTCTAGCGGAAGTCGGTGCGTGACCGTCAACTCAGCAGACATTTTGGGCAAAATAGGGGAGGACTTGCAAATTTCTCCCTTTATTAGCGCAGCAAGACAAGATCCTTGTTAAACTGCAGCTAATCACATTTTACCTTCATCATGTGGTATGAAATATTGCCCGGATTTGCTATAATGACGGTTTGTTTGATCGTTCCTGGAGTGGTCACTACTCACATACAGAAACTGACTAACGGTGGAAAGGAGAAGAGAATCGCAAGAGTTCCTTACCAGTGGTACTTGATGGAGAGAGACAAGCGGGTGTCAGGGACTGGACTGTATTACCAGTCAAAGggacttgaaaacattaaatgaagaTCATGCCATATCCCCTGCCCCTGTCCAAAAGTTTTGCAATGTGCATTTTGACCAACCatctattaaaataatttatatatatta

Function

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like

GO: NA

KEGG:

id description
K03945 NDUFA1; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU136613 False 418 lncRNA 0.43 3 15727659 15729373
XM_026917784.2 True 442 mRNA 0.42 3 15727650 15729388

Neighbor

gene id symbol gene type direction distance location
zbtb33 zbtb33 coding downstream 8625 15714084 ~ 15719025 (-)
atp1b4 atp1b4,LOC107658137,LOC107752012,LOC107550763,LOC107664337,LOC107744544 coding downstream 38173 15682403 ~ 15689477 (-)
cul4b cul4b coding downstream 54177 15662863 ~ 15673473 (-)
mcts1 mcts1 coding downstream 67414 15655705 ~ 15660236 (-)
zdhhc9 zdhhc9,LOC107744547,LOC107752016,LOC105893011 coding downstream 80597 15619090 ~ 15647053 (-)
sowahd sowahd coding upstream 15284 15744672 ~ 15746675 (-)
pdzd11 pdzd11,LOC107752002 coding upstream 61049 15790437 ~ 15801746 (-)
tex11 tex11 coding upstream 193568 15922956 ~ 15953012 (-)
lnx2b lnx2b,LOC108269063,LOC108432960,LOC107560395,LOC107665436 coding upstream 293951 16023339 ~ 16041623 (-)
nkrf nkrf coding upstream 367115 16096503 ~ 16105206 (-)
G115737 NA non-coding downstream 49974 15677063 ~ 15677676 (-)
G115746 NA non-coding downstream 65159 15662086 ~ 15662491 (-)
G115740 NA non-coding downstream 79899 15647551 ~ 15647751 (-)
G115675 NA non-coding downstream 189607 15501835 ~ 15538043 (-)
G115620 zdhhc24,LOC107744556,LOC107752023 non-coding downstream 324971 15400567 ~ 15402679 (-)
G115771 upf3b non-coding upstream 2954 15732342 ~ 15733676 (-)
G115775 NA non-coding upstream 13083 15742471 ~ 15744654 (-)
G115816 NA non-coding upstream 34757 15764145 ~ 15769841 (-)
G115812 NA non-coding upstream 52479 15781867 ~ 15784434 (-)
G115829 NA non-coding upstream 100070 15829458 ~ 15829760 (-)
apln apln other downstream 186924 15517054 ~ 15540726 (-)
tmsb2 NA other downstream 645146 15080784 ~ 15082504 (-)
ebf1a ebf1,ebf1a,LOC105011268 other downstream 952157 14670189 ~ 14775493 (-)
G114873 NA other downstream 1505795 14220316 ~ 14221855 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 other downstream 1812062 13841619 ~ 13915588 (-)
G115842 dlg3,LOC107751999 other upstream 121633 15851021 ~ 15852220 (-)
G116014 slc25a5,LOC104931197,LOC101464643,LOC102200398,LOC106515500,LOC103395576,LOC108430428 other upstream 339347 16068735 ~ 16071362 (-)
arr3b LOC108268864 other upstream 377391 16106779 ~ 16115433 (-)
zic6 zic6,LOC108268480,LOC108432897,LOC107658103,LOC107751978,LOC107601136,LOC107560577 other upstream 796242 16525630 ~ 16550675 (-)
LOC113529290 NA other upstream 2749580 18478968 ~ 18480847 (-)

Expression


Co-expression Network