G115842 (dlg3,LOC107751999)


Basic Information

Item Value
gene id G115842
gene name dlg3,LOC107751999
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 15851021 ~ 15852220 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU136727
CAGTCTATCAAGCACGACAAATGCATTTACCTGGTCATACCAGTCCCGATTGGTACAGGTGCATTCTGGCCACCATCCACCTTGCCCTCCCGAGTTGTTGCCATTTACCTTGGGGCCACCCTTGGATTGGCTCATGGGAGTGGGGCCTCCAGGGCCCCCGGCTGACATCTTTTTCCCTTTACTTCTGCCCAGTGTGCCCCCTCCGCCCATGCCTGCTCCTCCACCCGAGGTTTGGGGCGGTAAGGTCTGGCCACCTCCATAGCTGGCCGGATATCCATAGGGTTCCGGCTGCCAGTCTCCGTACGCTGGGGCGTCCATTCTGCGCAGGGCAGCCATGCGCGTCACCTCATAGCATTCTGGGCACTTGCAGCAGTGGTGGTGTTTGTGCATGCTGACTGGCTCACACGACGCGGtgctctctcactgtctctcactgctgctgctgcctccTCAGATCAAACACAGCACACAATGCTGCTCGGCTCAGAGAACAGCAGTGCTGGTGGAAAGGTACAGAAATCACAGGAATCTCACTGCCTTCTAAGCCCTGTTATCCTCCACTTTGTTCCTCCCAATCCAGAAAAGGAGGTGAGGAGGTATCAGCCAGGAAACAAGTAATACAAAAAGGACTATAGTCTTCCTCCCttcaatgtaaaaaaatgtggaAGGTAAAGctgaaaatactgtatatgatctCTCAATCAGAGACCAGCCCCGATGACGGAACTTTCTTCTTGACTGTCTTGCTTCACAGtgataagtaaataaattcatagatatataaattcatttgtttatatatgtatatatCTATGGATGATATCCGTGATCAAATCTTCctctgtatttttcttctttttaccAGCAagatttcctctttctcttcctcctgtGTTGGGAAGCGATatctttcctcctctctcttttctcagcctGCAGAAAGGAGCTGAGCACTGAATTGCCTCTCAGTTCGCTTGCCCTAGATGAGGATTATACAGAGGGATGCAAGCAAGCAAGAgcggggaaagagagagagagagaga

Function

symbol description
dlg3 Predicted to be involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; receptor clustering; and receptor localization to synapse. Predicted to be active in basolateral plasma membrane and cell junction. Is expressed in central nervous system; immature eye; notochord; sensory system; and ventral mesoderm. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 90. Orthologous to human DLG3 (discs large MAGUK scaffold protein 3).

NR:

description
PREDICTED: disks large homolog 3 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136727 True 1043 TUCP 0.50 2 15851021 15852220

Neighbor

gene id symbol gene type direction distance location
pdzd11 pdzd11,LOC107752002 coding downstream 49275 15790437 ~ 15801746 (-)
sowahd sowahd coding downstream 104346 15744672 ~ 15746675 (-)
zbtb33 zbtb33 coding downstream 131996 15714084 ~ 15719025 (-)
atp1b4 atp1b4,LOC107658137,LOC107752012,LOC107550763,LOC107664337,LOC107744544 coding downstream 161544 15682403 ~ 15689477 (-)
cul4b cul4b coding downstream 177548 15662863 ~ 15673473 (-)
tex11 tex11 coding upstream 70736 15922956 ~ 15953012 (-)
lnx2b lnx2b,LOC108269063,LOC108432960,LOC107560395,LOC107665436 coding upstream 171119 16023339 ~ 16041623 (-)
nkrf nkrf coding upstream 244283 16096503 ~ 16105206 (-)
f9a LOC108268424 coding upstream 474959 16327179 ~ 16330504 (-)
LOC113529004 tm9s2,LOC108269305,LOC108432943,LOC105912543,LOC106611723 coding upstream 775345 16627565 ~ 16642205 (-)
G115829 NA non-coding downstream 21261 15829458 ~ 15829760 (-)
G115812 NA non-coding downstream 66587 15781867 ~ 15784434 (-)
G115816 NA non-coding downstream 81180 15764145 ~ 15769841 (-)
G115775 NA non-coding downstream 106367 15742471 ~ 15744654 (-)
G115771 upf3b non-coding downstream 117345 15732342 ~ 15733676 (-)
G116015 NA non-coding upstream 219543 16071763 ~ 16073908 (-)
G116024 NA non-coding upstream 241832 16094052 ~ 16096428 (-)
G116034 NA non-coding upstream 285363 16137583 ~ 16138280 (-)
G116040 NA non-coding upstream 290784 16143004 ~ 16144293 (-)
G116042 NA non-coding upstream 292181 16144401 ~ 16144745 (-)
ndufa1 NA other downstream 121633 15727650 ~ 15729388 (-)
apln apln other downstream 310295 15517054 ~ 15540726 (-)
tmsb2 NA other downstream 768517 15080784 ~ 15082504 (-)
ebf1a ebf1,ebf1a,LOC105011268 other downstream 1075528 14670189 ~ 14775493 (-)
G114873 NA other downstream 1629166 14220316 ~ 14221855 (-)
G116014 slc25a5,LOC104931197,LOC101464643,LOC102200398,LOC106515500,LOC103395576,LOC108430428 other upstream 216515 16068735 ~ 16071362 (-)
arr3b LOC108268864 other upstream 254559 16106779 ~ 16115433 (-)
zic6 zic6,LOC108268480,LOC108432897,LOC107658103,LOC107751978,LOC107601136,LOC107560577 other upstream 673410 16525630 ~ 16550675 (-)
LOC113529290 NA other upstream 2626748 18478968 ~ 18480847 (-)
npm1b LOC108269235,LOC108431107 other upstream 3314364 19166584 ~ 19191444 (-)

Expression


Co-expression Network