il12ba


Basic Information

Item Value
gene id il12ba
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047601.1
NCBI id CM018547.1
chromosome length 30450434
location 14841180 ~ 14854258 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026918084.2
ATGATTGTAGTCACTGCCGGCATCCAAAGACACATGGCCTACACAGGAAAAATGATTTTTCTTGTGATTGGCGTCCTGGTTGTTCTTCCACATGCTTCAGCAGGATCCATCAAAGTGGCAGAAAGTTATTGGACTCTTAAAGCAAATGAATTGGTGGTGGATGAAGATATGGCCAAATATGGCAGTAAGGTGCTGGTTCCACTAGTGTGTGGTGAGGCTTTTGAGGGACAGAAGATCATATGGAAGCGAGAGAGCAGAGAGGAGCTCCCACTCCAGGgaaacagagtttttgtgatagTGGAGGAGAGACAGGGAGGCACATACACCTGTTACAGCACAGAGGGTAACTACCTGAACCATACTCTGGTATTGGTGCAGTGGAGATACAGGAAGATAATTAAAGGCACACCTGAGAAAGGTTATGTCCACTGTTCAACAAACAACTACAGTGGCTCCTTTCGGTGCTTCTGGGCCTGGGATGAAACAAGAGCTGGAAAAgttgcatttattaaaataacacgCTCTCACATTGTGGGAAACATTAGCTGCAGTCTGGACTCCAGTGCAGGCAGCATCACATGCCAAGATCATGCATACTGTCCCTATGCTGAGGAGATGGATCACATCGATTTGACCATTTATTTCCGAAGCAACTACATCATTGAGACCTATTATCTGCAGTTTCGAATCTCAGATATagTGAGGCCAGACATGGTTCGTATCAATAAGAAGAACAATATTCTGGAGCTTCAGTACCCAGAGAGCTGGAGCACACCCTTCTCCTACTTTCCGCTTACATTTCAGGTGAAAGAGATTCGCTGCCGGAGGAAAAGGATTTGTAACTGCTCTAACCGCAGATCAGCAAAGGTTGACCTAACACAAGAGCAGCAGTGGCCACTAAAAAAAGGggtgacagtgtgtgtaagagcacaGGATGACCTGGCTAACTCCTCTTGGGGAGAATGGAGCCAGTACAAGTGA

Function

NR:

description
PREDICTED: interleukin-12 subunit beta-like

GO: NA

KEGG:

id description
K05425 IL12B; interleukin 12B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026918084.2 True 981 mRNA 0.46 7 14841180 14854258

Neighbor

gene id symbol gene type direction distance location
rnf145a rnf145,rnf145a,LOC107723822,LOC107669103,LOC107664350,LOC107740095 coding downstream 18007 14786083 ~ 14823173 (-)
clint1a clint1,LOC108427862 coding downstream 219774 14600113 ~ 14621406 (-)
zbtb3 zbtb3 coding downstream 246521 14591624 ~ 14594659 (-)
trmt12 trmt12 coding downstream 255753 14576136 ~ 14585427 (-)
sytl4 sytl4 coding downstream 265557 14560234 ~ 14575623 (-)
sh3tc2 sh3tc2 coding upstream 63738 14917996 ~ 14932160 (-)
pttg1 LOC108268450 coding upstream 185345 15039603 ~ 15042499 (-)
foxi3b LOC108269392,LOC108427851 coding upstream 197102 15051360 ~ 15053378 (-)
LOC113528773 wnt8-2,LOC108268465,LOC108427847,LOC103036102,LOC106604410,LOC107752032,LOC107664333,LOC107669112 coding upstream 215565 15069823 ~ 15071886 (-)
LOC113528772 LOC108268464,LOC108427846,LOC107669111,LOC107602558,LOC107743918,LOC107752029 coding upstream 217740 15071998 ~ 15076599 (-)
G115331 NA non-coding downstream 36989 14803454 ~ 14804191 (-)
G115329 NA non-coding downstream 55162 14785329 ~ 14786018 (-)
G115325 NA non-coding downstream 93187 14745939 ~ 14747993 (-)
G115143 NA non-coding downstream 300872 14540108 ~ 14540308 (-)
G115100 NA non-coding downstream 366715 14468250 ~ 14474465 (-)
LOC113528719 NA non-coding upstream 153453 15007711 ~ 15016373 (-)
G115477 NA non-coding upstream 278939 15133197 ~ 15133435 (-)
G115553 NA non-coding upstream 464482 15318740 ~ 15318949 (-)
G115554 NA non-coding upstream 466762 15321020 ~ 15321301 (-)
G115620 zdhhc24,LOC107744556,LOC107752023 non-coding upstream 546309 15400567 ~ 15402679 (-)
ebf1a ebf1,ebf1a,LOC105011268 other downstream 65687 14670189 ~ 14775493 (-)
G114873 NA other downstream 619325 14220316 ~ 14221855 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683,LOC107593230 other downstream 925592 13841619 ~ 13915588 (-)
G114460 NA other downstream 1290405 13547512 ~ 13550775 (-)
fbxo38 fbxo38 other downstream 1813225 12934557 ~ 13027955 (-)
tmsb2 NA other upstream 226526 15080784 ~ 15082504 (-)
apln apln other upstream 662796 15517054 ~ 15540726 (-)
ndufa1 NA other upstream 873392 15727650 ~ 15729388 (-)
G115842 dlg3,LOC107751999 other upstream 996763 15851021 ~ 15852220 (-)
G116014 slc25a5,LOC104931197,LOC101464643,LOC102200398,LOC106515500,LOC103395576,LOC108430428 other upstream 1214477 16068735 ~ 16071362 (-)

Expression


Co-expression Network