mtbp (mtbp)


Basic Information

Item Value
gene id mtbp
gene name mtbp
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 21748221 ~ 21771707 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026939611.2
TGTAGTGCACTTAATGTAGGGAGTAGGgcgccatttgggattcagcctagAAGAAGGATTCGGTAAAACGCGGGGAAGTTTGGTTTGTGTTGTGTGGCATGATATTAACTAAGTGGACTTATGTGAGGTGAATGAGATAGAGCTATGGACAGATATGTTCTTATTGTGGTAATTAATCAGGAAGCGAAGAAAGAGAGCTCTTTCAGCGggATTGAAGCTGCCAGAAAGGTGTATAACAAGCTAAAAGATATTTGCAGGACTGACAGCACGACACGGCTTTCTCCCCTTCCAGCTTGCTCTCTGAGTGGAACTCCTGCCTCCCCAAAATGGTTCTTCGCTTTTCAAGCAACTCATGGCCCGACACAGTTCTGTAGCTCAGAGTgggatgaggtgtgtgtgcagcacAGTGATGGTGAAGAGTCTGTGCTTTCTCCTGTGGACAGCTGTGTCTGCGCCCTGCAAGAGCAAGAGGAGCAGAGCCAGCTGTCTGAGATCACCTCACACACGGAGCTCTTTGAGGAAGCAGCTGATTCGCTTCATCAGTTAGCAGACAAACTTCCTCCTCCAgGAAGGTTCCTGTTGGATGTAATTCTGCTGTGTGAGGGTGAGGTAGGAATGAAGGACTTGCTGCCAGTGATCGGTTCCCTGAAGCATATGCGGGCTTGGCACTCTGCACAGATGACAGTCATCACAGAGCAAAGTGCAGGATGGCGAACAGCAGCCTCGTACCTGTCGGGCCGTGTGTGTTCTCCCTCTGATCTAGAGAGCTGCATCGATGCCAGTGAGCTTTGGAGAGGGGGACTGCTGATCCGAGAGAAGAAGTTTGTCTCTGAGCTGCTGTTTGAGGGGTTCAGTTTGAAGTGGCAGATCGGAGGTGGCCGGAGCCACATGTCAGACCCCTGCTGCTTTACTGACCACATGATTCAGCCTGAAGTGTTTCACTATTACCAGCCAGTGCTGGAGCTGATCCAGTTGGTCAGAGTCGCAGATCTCCCAGTGATTCTTCTTTCTGCCACTGAGTTTGAGCTTGCATTGTCCAGCAAATCCGCCAAAGCCAAACTTCTGTTAGAACAGCTCAGAGCTCTACGGGGAGAGGTTGGAGCTctgttctctctttcctgtGTGGTGAGCGTTGAAGCCTTTCCTCCAGCCTCCCAGCTCAGTGCCTCCAAATGGAGGGATTTTGTGGCCAAGCGCCCAAAAGCTTTCTCTGCTCCTGATGTCAGGGTGAAAGGAGAGAAAGGCCACTATCTTCTCTTGGTTCAGGGGGCAGAGACTGGTGGCTGCAAAGCACGATTAATACACTCCTCCAATCAGATTAATGGTGCTGTTGCTCTGGCAACAATCAACAGCCTTGTACAGGAAAAAGTTTCATTATCCTCAGGCACCGAGATTGCTGATTGGCTGCAATCTCTGCCCCGTCTCTGTGGAGACGACCTCTTGCGGAGGGAGAGGAGGCTGGCCAGGGTCCAGCACCGGGTCGTCCAGGAATGTGCCCGAAGAAGAGAGGAGGCACAGAAGCCCGCAGCTGTGCCACTAAATGACCTGAGAGTACTGCTGCGTCTGGCCAGAGAGCAGTACCTAAAGATGCAAAATGCCATGCAGCCCAGAGTATCATGTGTGCCAGTAGAGAAGGAGAACCACACTTCTGTTACAGGAGCAGACAATAAGCACACCGCCCACTCAGAATTGCCAGAGAGAAGTGTTCTGAGGAACTATGAAAACGCGCAGAAGATCCGGCACAAAAACAGGTCTAGCCTGTTCAGCAGTGGCTCTTCAGACTGTCTTATGGGCCCTAAAGATGGCCAGAAGAGTGTTTCTGCACCACTGGATGCACGAGAGCTGCTTAAGCACTTCACTGCTGATGGGCTACCAAGTGGAGAACTACAACCTCTCCCTGTCCTCAGACGGGATAATGCGTTCCAGTTGTCGCCTGATCTCACTCCCAGAAAAGTGACCAGACTTCCATTCAGGCAAGCAGCCAGCGCTCACTACCATGGCATAGAGTTTTGCTTGGACGAGCGGAAGGCTCTGGAGAGAGACTGTGGATTTGCACGCTTGCAGTCACGGCTAATCCGCTTCGAGACCCAGACTACGTGCTGTAAGGAGCCGTGCCCGGTGCCGCTGGCTCTGAGCCCTATGCCCGCACCTACTCCCTCGCCCTCTGAACCTGGCAGCGTACCGGACGGAGAAGCTGCACACAACGATCTACCTCATCTCAAACGCCGCTCCCGTGAAccagacgcgcacacacatcagcaaaaaagGTTGGTCAAGTCAGAGAGCAGTGAGTCTCTGGGCTCTCAGTGCAGTGGAGGTAGTGGTTCACACCCAGCCGTGAGAGCTCTGCAGCAGCAGTCAGGCCGTTCTCTCTCCTGCTCCAGTCAAACCAGACGCTCCACTGCTGGAGCTGAAAGTTCCAACGAGCCTCCAGCCAGCCAGAAATCTAGCCAGGGCCAAACTGAGTCACGTTCACAGAAACACAATCGGATGCTGAAGGAGGTGGTTGCAAAGACACTGAAGCACTATGGCATCACCAGCGAGCACAAGTGCTTCAAGGCCTGCAGTCAAAGACTGTTTGATGTATCAAAGCTCTATCTGAAGGACCTGAAAACGTCACGGGGTCTCCATGAGGAAATGAGAAAAGCAGCTGGTCGAAATGCTAAGCAGGTGATCGACTGGGTTGTGGAGAAAGCCAAAAAATGATGTGTACGTCAGAGGTGTGTACACACCACGTGTTTACCTGTTTTGCATTATGTAGTGTCTGTatgatgtgttagtgtgtattaaagtgtgttttattttaca

Function

symbol description
mtbp Predicted to act upstream of or within regulation of protein ubiquitination. Orthologous to human MTBP (MDM2 binding protein).

NR:

description
PREDICTED: mdm2-binding protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026939611.2 True 2808 mRNA 0.52 23 21748221 21771707

Neighbor

gene id symbol gene type direction distance location
mrps2 mrps2 coding downstream 233866 21509640 ~ 21514355 (-)
setd2 setd2,LOC106606040,LOC107743179,LOC107673014,LOC107685560,LOC107752833,LOC107581536 coding downstream 268988 21455371 ~ 21479233 (-)
ccdc12 ccdc12,LOC107743233,LOC107752847,LOC107581540 coding downstream 375527 21361624 ~ 21372694 (-)
slc6a19b slc6a19b,LOC108270036,LOC107743232,LOC107596751,LOC107685553,LOC107662664,LOC105905464 coding downstream 608951 21131082 ~ 21139270 (-)
LOC113542399 LOC108270030,LOC108415428 coding downstream 617274 21120820 ~ 21130947 (-)
col14a1a col14a1 coding upstream 20304 21792011 ~ 21882210 (-)
deptor deptor,LOC107685573 coding upstream 121440 21893147 ~ 21925684 (-)
polr3c polr3c,LOC107673034,LOC107707173,LOC107743190,LOC107685575 coding upstream 236528 22008235 ~ 22019237 (-)
gba gba,LOC107596705,LOC107598447 coding upstream 260761 22032468 ~ 22038626 (-)
dap3 dap3,LOC106597783 coding upstream 269428 22041135 ~ 22045666 (-)
G11974 NA non-coding downstream 213022 21493358 ~ 21535199 (-)
G11961 NA non-coding downstream 224506 21475423 ~ 21523715 (-)
G11973 rbm12b non-coding downstream 255012 21487710 ~ 21493209 (-)
G11970 NA non-coding downstream 264522 21480619 ~ 21483699 (-)
G11806 fhod3,LOC107743170,LOC107662660 non-coding downstream 508945 21238035 ~ 21239276 (-)
G12373 NA non-coding upstream 85908 21857615 ~ 21858840 (-)
G12375 crabp2a,LOC108272314,LOC107598461,LOC107596745,LOC108437453,LOC107673000,LOC107685576 non-coding upstream 100569 21872276 ~ 21960299 (-)
G12377 NA non-coding upstream 155752 21927459 ~ 21930143 (-)
LOC113542638 NA non-coding upstream 162976 21934683 ~ 21937785 (-)
G12498 NA non-coding upstream 561418 22333125 ~ 22334604 (-)
rxrbb rxrbb,LOC108267229,LOC108413045,LOC107596638,LOC107581542 other downstream 472880 21263577 ~ 21275341 (-)
G10832 LOC108267614 other downstream 1924538 19816477 ~ 19823683 (-)
trnaq-cug_9 NA other downstream 2001338 19746526 ~ 19746883 (-)
trnaq-uug NA other downstream 2002281 19745650 ~ 19745940 (-)
LOC117597712 NA other downstream 2045061 19702611 ~ 19703160 (-)
aicda aicda other upstream 914700 22686407 ~ 22691804 (-)
zgc:92606 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC108266696,LOC107672985,LOC107598403 other upstream 1129644 22901351 ~ 22908140 (-)
LOC113542417 NA other upstream 1348765 23120472 ~ 23129313 (-)
cxcr3.2 LOC108266514 other upstream 1361219 23132926 ~ 23165584 (-)
cicb cic,LOC107582035 other upstream 1705451 23477158 ~ 23527323 (-)

Expression


Co-expression Network