gsk3ab (gsk3a,LOC103362704)


Basic Information

Item Value
gene id gsk3ab
gene name gsk3a,LOC103362704
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 23449585 ~ 23467912 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026939703.2
AGAGGAGTCACAGACGTGTGTTCCGCCATGTCTGCGCAAATGTTTTCATCTGGAACTGAATAAACTTacgaaaaaaatctgaaaacatgAGATAGGGCTCAGAGTTTTTATTCCCCATAATATTTCAGAATGATTTGCAGTGACAAAAAGACTGCAGTAGATGTTGTAGActgctaattttaaaaaaaagcaatacgAAATTAACATTGTCCgtgcaaataaataataattcgACCTAATTTATCCATTGTCATATAGTGTTCAATACTTTTAGGGTTTTATGTTTATAGTTTTAGCGTACGAGCAGATCCACGGAGTTGAACTCCATTACCCATAAGGCTATGCGGTCAGCACGTTGCTGTACGTCAGGTCGGACCACACAACCAGACAGGGGGAAGAAAGAGAAGACGGAGCTACAGCCCCGCCGATATACCATTCAAccagtctttatttttttttttataatagttATTGTGGTTTAAATCGACATAGCCATCAAACGCCTGGCCCTAGTTTGTCGGCACACTTTCCCCCTGCCCCTGCACActcacagaaaagaaaatgagcGGCAGCGGGCGGCCCAGGACCAGCTCGTTTGCCGAACCGCCGGGGGCTCCGGGAGCCGCTGCAGCCGCCGCCGGAAGCGCCGTTGCGGGTGGAAGCGCTTCAGGAAAGTCCGGGGCTGCTCAGGCCTCCGGCGCTACTTCGACTGGCTTTGGAAACTTGAAGCTTAGCAGGGACAGTGGGAAGGTGACCACAGTGGTAGCAACACCTGGACAAGGTCCAGATCGCCCACAGGAAGTGTCCTACACAGACATTAAAGTGATTGGTAATGGCTCATTTGGAGTGGTGTATCAGGCCCGACTCAGCGACAGCCAGGAGATGGTGGCAATCAAGAAGGTGCTGCAGGACAAGCGGTTTAAGAACCGAGAACTACAGATTATGCGCAAGCTGGACCACTGCAACATTGTTAGGCTACGCTACTTCTTCTATTCCAGCGGAGAGAAGAAAGATGAAGTGTATTTGAATCTGGTGCTGGATTATGTACCAGAGACCGTGTACAGAGTTGCACGCCACTTCAACAAGGCCAAGACCACCATACCTATCATCTACGTCAAAgtgtaTATGTATCAGTTATTCCGCAGTTTGGCGTATATCCATTCCCAAGGCGTCTGCCACAGAGACATCAAACCACAAAATCTGCTAGTGGACCCCGACACTGCTGTTCTCAAGCTGTGTGATTTTGGCAGTGCGAAGCAGTTAGTTCGCGGTGAGCCCAACGTTTCGTACATCTGCTCACGGTATTACCGAGCCCCAGAGCTCATTTTCGGAGCCACAGATTACACCTCTAACATTGATATCTGGTCAGCCGGCTGTGTATTGGCTGAGTTGCTGCTGGGCCAGCCCATTTTCCCCGGTGACAGCGGAGTTGACCAGCTAGTTGAAATCATTAAGGTTTTGGGTACGCCGACAAGAGAACAGATCCGGGAAATGAATCCCAACTACACGGAGTTCAAATTCCCTCAGATCAAAGCGCATCCCTGGACTAAGGTGTTTAAACCCAGGACGCCTCCGGAGGCCATTTCTCTGTGTTCCCGTCTGCTGGAATACACACCTGTGACGCGTCTCTCTCCGCTAGAGGCCTGTGCCCACGCTTTCTTCGATGAACTGCGCCAGCCCAATGCTCGCCTGCCCAGTGGCCGAGAGCTGCCTTTGCTCTTCAACTTCAGCCCTGTGGagCTGTCTATCCAGCCACAGTTGAACTCCACTCTCATTCCTCCTCATGCTCGCTCGCAGACGACGCCTGTTTCTCACGAAGGCAGCGTGTCAGACAGCTCAGCCCAGTCCAGCTCTGCACCGGGAGCCCTGAGCAACAGCACCTGAGCATTACCTCTATGTTTCTGCACCGTTCTccctcacctcctcctcctcctcctcctgtcacCTGTCCCTCGTTCCAGCCTTTTCAAGCTCCAGAACCCGAATCTGTTTCGCTCAGATTCTGAACCCCTTCGTTACACATTTAGAATCCTTCAGGAGAAcgtgtttttgtctgttttgttcatttcaggTAGACTTTGTCCTTGATAAGGTTTGCAGCTGTGTGGTTTAAAGGTAAAGAATGGTTTGTTGAGGCATTTCTGACCTCTAGTGGCAGGAGGAGAAAAGCAGATTTAACCTCCCCCCCTTACTGTCTGCTCCGTCTCTGTGGAGGTccaacatttttattatgttttaaacagaaatacacCTCATACAGCCACAATATGCAGgtgtattcttttattttagtttgctcttaaagtgtaataaattttagctgttttttttttcttttcttaaacgAGACCATGTTCTTGATACGAGTGTGGAAGTGTTTTTATGGAGCAGTGAGTATAAGTGACGGTCTTGTCTCTTTGCCCAGAATTTTGTTTAGGAAAAGgacaagagtgtgtgttttctttttccgaAGTGAACGCAAGCTCGACCACTCTTCCTTCGTTGATTGGTTAAAGTTGAAAGGGCTCCATCTTGAGCTTATCCTAAATACCAAAACCTGTCCGAGTTAAACGTGCTGGTGTAGGGTCAGACTTTTGTCTTTCACATCCCCGTGAATGTTAGTGATAGGGATGGAGAGGGCTGATCCTAGAGCAGTACTGTTAATTATGGCACTGTATAATTTCTGTATGATTTTTCTATTCTTGCAAGGACTGAACGTATAGAAATGTGGTCCTTGAACGTATAGAAATGTAAGCGCACACGTTTATTTTGTTCGTGGCCCCGGCAATATCCTCTGCTCTTGCAATTCACACAATTCTATAGGAGTTTAGATCAtaaaatgattgtgtgtgtgtgcgtgtgtttcaGTAGAgttagaaaatttaaatatttaaatggctGCTGATCCGTGATGAATCTATATCATTGTAAGTATCATAGAGCCCCACActcatgcgcacacacacacactgatgtccCTCCACTCCCACCTGGAGCCGTCCATCCGTCCCCCTCCATCCCCAATTCTCCCTTCTCTCACTGCTGATATGTAAATATCATGTaccttttactttttatttttgttattattgttattctgtTCTTgtaacttgatttttttttttctagtggaGTAGTGCTGGTTCAAGTAGTGGccagctctctctgtctccctctctgtccctctgtctttctttctcccagTGCTCTCATTTGTACATAGCATTTCAACTTGTCCCCCTCACCCCTGCCAAGGGAGGGGGGGGAATGGAACAAAACTGagtctcgctctttctctctttctccttccctctgtcgctctctctcaccctctctctcccGCAGTCCTTGTTCATGTGCTCACTTCCTCATAAATGTTATTtcgaatattttatttattgtattgcagacagtgtttttgtttttcttttttaatgatctGATGGGGTAGAGACTTGTGTGTGACCTGTCATTAGAACAACATTCATATCCTAAACTTGATATTATCTTGGAATGTGTTCGAGAATATGAACGTATTGTCCAGAACATTCTGTGAGTCTCATCATGACGAATGTTCCTGAAGGTGCAGGCACACAGACGTATACAAAAGAAAGATAAACGTGGACTGCTTAGCCCATCCAGGACTCAGTGAATGggtgagggagagggagagagaaactgtgtttttgtttgttggtatAAATAAGCTCATTAATAAAGTGATGAAAAGTGTCTCTGCCAGTGA
>XM_026939704.2
AGAGGAGTCACAGACGTGTGTTCCGCCATGTCTGCGCAAATGTTTTCATCTGGAACTGAATAAACTTacgaaaaaaatctgaaaacatgAGATAGGGCTCAGAGTTTTTATTCCCCATAATATTTCAGAATGATTTGCAGTGACAAAAAGACTGCAGTAGATGTTGTAGActgctaattttaaaaaaaagcaatacgAAATTAACATTGTCCgtgcaaataaataataattcgACCTAATTTATCCATTGTCATATAGTGTTCAATACTTTTAGGGTTTTATGTTTATAGTTTTAGCGTACGAGCAGATCCACGGAGTTGAACTCCATTACCCATAAGGCTATGCGGTCAGCACGTTGCTGTACGTCAGGTCGGACCACACAACCAGACAGGGGGAAGAAAGAGAAGACGGAGCTACAGCCCCGCCGATATACCATTCAAccagtctttatttttttttttataatagttATTGTGGTTTAAATCGACATAGCCATCAAACGCCTGGCCCTAGTTTGTCGGCACACTTTCCCCCTGCCCCTGCACActcacagaaaagaaaatgagcGGCAGCGGGCGGCCCAGGACCAGCTCGTTTGCCGAACCGCCGGGGGCTCCGGGAGCCGCTGCAGCCGCCGCCGGAAGCGCCGTTGCGGGTGGAAGCGCTTCAGGAAAGTCCGGGGCTGCTCAGGCCTCCGGCGCTACTTCGACTGGCTTTGGAAACTTGAAGCTTAGCAGGGACAGTGGGAAGGTGACCACAGTGGTAGCAACACCTGGACAAGGTCCAGATCGCCCACAGGAAGTGTCCTACACAGACATTAAAGTGATTGGTAATGGCTCATTTGGAGTGGTGTATCAGGCCCGACTCAGCGACAGCCAGGAGATGGTGGCAATCAAGAAGGTGCTGCAGGACAAGCGGTTTAAGAACCGAGAACTACAGATTATGCGCAAGCTGGACCACTGCAACATTGTTAGGCTACGCTACTTCTTCTATTCCAGCGGAGAGAAGAAAGATGAAGTGTATTTGAATCTGGTGCTGGATTATGTACCAGAGACCGTGTACAGAGTTGCACGCCACTTCAACAAGGCCAAGACCACCATACCTATCATCTACGTCAAAgtgtaTATGTATCAGTTATTCCGCAGTTTGGCGTATATCCATTCCCAAGGCGTCTGCCACAGAGACATCAAACCACAAAATCTGCTAGTGGACCCCGACACTGCTGTTCTCAAGCTGTGTGATTTTGGCAGTGCGAAGCAGTTAGTTCGCGGTGAGCCCAACGTTTCGTACATCTGCTCACGGTATTACCGAGCCCCAGAGCTCATTTTCGGAGCCACAGATTACACCTCTAACATTGATATCTGGTCAGCCGGCTGTGTATTGGCTGAGTTGCTGCTGGGCCAGCCCATTTTCCCCGGTGACAGCGGAGTTGACCAGCTAGTTGAAATCATTAAGGTTTTGGGTACGCCGACAAGAGAACAGATCCGGGAAATGAATCCCAACTACACGGAGTTCAAATTCCCTCAGATCAAAGCGCATCCCTGGACTAAGGTGTTTAAACCCAGGACGCCTCCGGAGGCCATTTCTCTGTGTTCCCGTCTGCTGGAATACACACCTGTGACGCGTCTCTCTCCGCTAGAGGCCTGTGCCCACGCTTTCTTCGATGAACTGCGCCAGCCCAATGCTCGCCTGCCCAGTGGCCGAGAGCTGCCTTTGCTCTTCAACTTCAGCCCTGTGGagCTGTCTATCCAGCCACAGTTGAACTCCACTCTCATTCCTCCTCATGCTCGCTCGCAGACGACGCCTGTTTCTCACGGCAGCGTGTCAGACAGCTCAGCCCAGTCCAGCTCTGCACCGGGAGCCCTGAGCAACAGCACCTGAGCATTACCTCTATGTTTCTGCACCGTTCTccctcacctcctcctcctcctcctcctgtcacCTGTCCCTCGTTCCAGCCTTTTCAAGCTCCAGAACCCGAATCTGTTTCGCTCAGATTCTGAACCCCTTCGTTACACATTTAGAATCCTTCAGGAGAAcgtgtttttgtctgttttgttcatttcaggTAGACTTTGTCCTTGATAAGGTTTGCAGCTGTGTGGTTTAAAGGTAAAGAATGGTTTGTTGAGGCATTTCTGACCTCTAGTGGCAGGAGGAGAAAAGCAGATTTAACCTCCCCCCCTTACTGTCTGCTCCGTCTCTGTGGAGGTccaacatttttattatgttttaaacagaaatacacCTCATACAGCCACAATATGCAGgtgtattcttttattttagtttgctcttaaagtgtaataaattttagctgttttttttttcttttcttaaacgAGACCATGTTCTTGATACGAGTGTGGAAGTGTTTTTATGGAGCAGTGAGTATAAGTGACGGTCTTGTCTCTTTGCCCAGAATTTTGTTTAGGAAAAGgacaagagtgtgtgttttctttttccgaAGTGAACGCAAGCTCGACCACTCTTCCTTCGTTGATTGGTTAAAGTTGAAAGGGCTCCATCTTGAGCTTATCCTAAATACCAAAACCTGTCCGAGTTAAACGTGCTGGTGTAGGGTCAGACTTTTGTCTTTCACATCCCCGTGAATGTTAGTGATAGGGATGGAGAGGGCTGATCCTAGAGCAGTACTGTTAATTATGGCACTGTATAATTTCTGTATGATTTTTCTATTCTTGCAAGGACTGAACGTATAGAAATGTGGTCCTTGAACGTATAGAAATGTAAGCGCACACGTTTATTTTGTTCGTGGCCCCGGCAATATCCTCTGCTCTTGCAATTCACACAATTCTATAGGAGTTTAGATCAtaaaatgattgtgtgtgtgtgcgtgtgtttcaGTAGAgttagaaaatttaaatatttaaatggctGCTGATCCGTGATGAATCTATATCATTGTAAGTATCATAGAGCCCCACActcatgcgcacacacacacactgatgtccCTCCACTCCCACCTGGAGCCGTCCATCCGTCCCCCTCCATCCCCAATTCTCCCTTCTCTCACTGCTGATATGTAAATATCATGTaccttttactttttatttttgttattattgttattctgtTCTTgtaacttgatttttttttttctagtggaGTAGTGCTGGTTCAAGTAGTGGccagctctctctgtctccctctctgtccctctgtctttctttctcccagTGCTCTCATTTGTACATAGCATTTCAACTTGTCCCCCTCACCCCTGCCAAGGGAGGGGGGGGAATGGAACAAAACTGagtctcgctctttctctctttctccttccctctgtcgctctctctcaccctctctctcccGCAGTCCTTGTTCATGTGCTCACTTCCTCATAAATGTTATTtcgaatattttatttattgtattgcagacagtgtttttgtttttcttttttaatgatctGATGGGGTAGAGACTTGTGTGTGACCTGTCATTAGAACAACATTCATATCCTAAACTTGATATTATCTTGGAATGTGTTCGAGAATATGAACGTATTGTCCAGAACATTCTGTGAGTCTCATCATGACGAATGTTCCTGAAGGTGCAGGCACACAGACGTATACAAAAGAAAGATAAACGTGGACTGCTTAGCCCATCCAGGACTCAGTGAATGggtgagggagagggagagagaaactgtgtttttgtttgttggtatAAATAAGCTCATTAATAAAGTGATGAAAAGTGTCTCTGCCAGTGA

Function

symbol description
gsk3a Enables protein kinase A catalytic subunit binding activity; protein serine/threonine kinase activity; and signaling receptor binding activity. Involved in several processes, including negative regulation of glucose import; negative regulation of glycogen synthase activity, transferring glucose-1-phosphate; and positive regulation of protein metabolic process. Predicted to be located in microtubule; mitochondrion; and postsynapse. Predicted to be part of beta-catenin destruction complex. Predicted to be active in axon; cytosol; and nucleus. Implicated in amyotrophic lateral sclerosis.

NR:

description
PREDICTED: glycogen synthase kinase-3 beta-like

GO:

id name namespace
GO:0055013 cardiac muscle cell development biological_process
GO:0006468 protein phosphorylation biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0001947 heart looping biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08822 GSK3A; glycogen synthase kinase 3 alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026939703.2 True 3745 mRNA 0.46 10 23449585 23467912
XM_026939704.2 False 3742 mRNA 0.46 10 23449585 23467912

Neighbor

gene id symbol gene type direction distance location
znf574 LOC108266406 coding downstream 4650 23427178 ~ 23444935 (-)
grik5 grik5,LOC107717427,LOC107551699,LOC107700189,LOC107671209 coding downstream 30847 23348325 ~ 23418738 (-)
LOC117597378 LOC108266467,LOC108266480 coding downstream 103402 23340433 ~ 23346183 (-)
LOC117597145 LOC108266480,LOC108266467,LOC108266492 coding downstream 120673 23318607 ~ 23328912 (-)
LOC117597157 LOC108266480,LOC108266467,LOC108266492,LOC108266426 coding downstream 212006 23228943 ~ 23237579 (-)
erfl3 erf coding upstream 69907 23537819 ~ 23579291 (-)
pou2f2a pou2f2,pou2f2a,LOC107671217,LOC107717432,LOC107582157 coding upstream 124667 23592579 ~ 23634925 (-)
atp1a3b atp1a3b,LOC108432319,LOC108266346,LOC107671176,LOC107723432,LOC107582039,LOC107551687 coding upstream 212380 23680292 ~ 23702357 (-)
si:ch73-22o12.1 LOC108266341,LOC108261109 coding upstream 263690 23731602 ~ 23795116 (-)
vars1 vars,LOC107700174,LOC107723495,LOC107717441 coding upstream 359526 23827438 ~ 23847366 (-)
G12917 NA non-coding downstream 318087 23131275 ~ 23131498 (-)
G12819 NA non-coding downstream 510789 22938226 ~ 22938796 (-)
G12816 NA non-coding downstream 521021 22919285 ~ 22928564 (-)
G12808 NA non-coding downstream 580174 22869159 ~ 22869411 (-)
G12805 NA non-coding downstream 585567 22863485 ~ 22864018 (-)
G13361 NA non-coding upstream 38108 23506020 ~ 23506298 (-)
G13369 NA non-coding upstream 59778 23527690 ~ 23527940 (-)
G13424 NA non-coding upstream 346365 23814277 ~ 23816058 (-)
G13438 NA non-coding upstream 443167 23911079 ~ 23912280 (-)
G13452 NA non-coding upstream 553618 24021530 ~ 24021918 (-)
cxcr3.2 LOC108266514 other downstream 284001 23132926 ~ 23165584 (-)
LOC113542417 NA other downstream 320272 23120472 ~ 23129313 (-)
zgc:92606 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC108266696,LOC107672985,LOC107598403 other downstream 541445 22901351 ~ 22908140 (-)
aicda aicda other downstream 757781 22686407 ~ 22691804 (-)
rxrbb rxrbb,LOC108267229,LOC108413045,LOC107596638,LOC107581542 other downstream 2174244 21263577 ~ 21275341 (-)
cicb cic,LOC107582035 other upstream 9246 23477158 ~ 23527323 (-)
dedd1 dedd2 other upstream 191611 23659523 ~ 23674479 (-)
LOC113542286 riiad1 other upstream 674687 24142599 ~ 24149267 (-)
LOC117596842 NA other upstream 768380 24236292 ~ 24240079 (-)
si:dkey-92i15.4 LOC108265956,LOC108429986 other upstream 923618 24391530 ~ 24404530 (-)

Expression


Co-expression Network