trim46a (trim46,trim46a,LOC108429934,LOC107723477,LOC107714687,LOC107582073)


Basic Information

Item Value
gene id trim46a
gene name trim46,trim46a,LOC108429934,LOC107723477,LOC107714687,LOC107582073
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 25035405 ~ 25052980 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026944706.2
CGCATGCTCTACAGTGAGTGAACTCATTTCATCATCGTGGACGCCTGTTTTAGACCCTTTTCTCTTTATACAGAGGCAGCATTGAGGCCACTTAAATATACAGCCATCAGAAATGGAAAGAGTGAAAAGGGACTGCGTGATGGACATGGCAGACGCAGAACTGCAGACTTTCACGTCTATAATGGACGCGCTGGTGCGCATCAGTtCCAATATGAAGAGTATGGAGCGGGAGCTCCGCTGTCCGGTGTGTGAGGAGATGATGAAGCAGCCGATTGTGTTGCCATgcctgcacagtgtgtgtgtgttgtgtgcagcAGAGGTGTTGGTGCAGAGAGGTTACCCTCCTCCTGAACTCCCGCAGGAGCCCAACACACCCACCTCAAGCCCCAGCACCCGCTCACCACGACACGCTCGCCGACCACCACCCAAAACTGACCGCCTTGAGCGTGTGCTCAaaacagTATGTGGCACCTATCCGGGCCGGAGACGGAAAGACACAATTCCTCTGAATATGTTGTTTCCATGTCCCACTTGTTGCCGGGACGTAGAGCTGGGAGAGCGAGGCCTTGCCGACTGCCTACGCAATCTCACACTGGAGCGTATAATTGAGaggtacagacagacagtgagtcTAGGCAGCATGGCAGTGATGTGTCAGTTCTGCAAGCCCCCTCAAGCACTGGAGGCCACTAAAGGCTGCGCTGACTGCCGGGCCAATTTCTGTAACGAGTGTTTTAAGTTGTACCACCCCTGGGGTACCCCACGTGCCCAACATGAGCACATTCTGCCCACACACAGTTTCAGGCCCAAGctgctggtgtgtgttgagCACGAGCAGGAGCGGATGCAGTTCTACTGTCGTTCGTGTCAGCGTCTGTTGTGTGCACTCTGTAAGCTGCGTCGTGTTCACAACGGGCACAAGGTCATGCCCATAGCACAAGCCTACCAGACTTTAAAGGATAAAATTACTAAGCAGATGAACTACGTTCTGGCTCATCAAGAGAGGGTGCAGGCCCAAATCACTCAAGTGGAGAGTGCCATCGCTCAGACAGAGGTGAACAGTGCTGTTGCTAAAGAAAAgctgaatcagtgtgtgaacaATATGCGTGAAGAGCTGGCTGATCGGCAGTGTGCTCTGATCAAAACTCTGGAGGAGACTCGTGTTCAAAAATCGGAAGCTCTAAACACACAACTTTCAGAGAAACAGAGTCTGCTGGACAATGCAGGGCTCGTCATGTACACGCAGGAGCTACTGAAAGAAAACGATCAGCCATGCTTCGTGCAGGCCGCCAGAGTCACCCACAACCGGTTGGTTACAGCCATAGAGAACCTGCAGCGCTTCTCCCTCTCTGCAGATCCCTCATTTCGCCGTTTCCATGTGGACATCTCCAGAGAGCTCAAGCTACTCAGCAGCATGAATTTCATACAAGCTCCACTGGCTCCTGTAATCGACACCCAAAAGACTTTGGCCTATGATCAGCTGTACCTGTGCTGGCGCCTCCCACAGGACTCTGCTCCCGCCTGGCACTACTCCGTGGAGTATCAGAGGAAAGATGGCAGAGATGGACCTTTGTGGGGCGGGGTCAAATCTGAAGGCTCTGGAGGCCCCAACAGTCCATGGCAGCGCATGGATGAGGTGGGCGGGACTAGTGCAGTGATTGACAGACTGGAGATGGACAGCGTGTATGTGCTTAGAGTGAGAGGCTGCAACAAGGCGGGTTTTGGGGAGTACAGCGAGGAAGTGTATCTACACACACCGCCTGCACAAGtgcTGTCATTTTGTCTGGACTCTCGCTGGGGACTCCATGCTGAGCGTGTGGCACTGGGTAAGGGGCAGACGTATGCCCGTAGCGTGCCTGGTCTCACTCTCCTGCAGGCCGCCGACCGCGCCCTCACTTCCTTTcatctgacctctgacctcctGGTGGCGGATGTGTCAATCACCCAGGGTCGTCACTACTGGGCATGCTCAGTGGAGCCTGGTTCATACTTAGTCAAGgttggtGTTGGTCTAGAGACAAAGCTTCAAGAATGGTTTCACTTACCACAGGACATGGCAAGTCCCCGATATGATCCTGATAGTGGGCATGACAGTGGAGCAGAGGATGCCCAGGACTGTCCACCTCCATTCTGCTTCCTCACCATGGGCATGGGTAAGATTCTCATGCCCAAGTCAGGGGCATCTAATGGCATGTCTGGCCCTCTCACTGCCCCTCTGCCCCCACGCCTTGGCGTATGTCTGGACTTTGATAAAGGATGCATTACTTTCTACGATGCCCACTCGCTGCGAGTGCTGTGGGACGGGACTGTTGATTGCTCCGCCCCTGTTTGCCCAGCCTTTTGCTTCATTGGTGGAGGGGCACTGCAGCTGCAGGAGCTAATAGCCAATCACAGCACGGAGCAAGCCCCGCCCAGGAGAGTCACCATTCAATCACATGCAACACATCTGAGTAACTGAAGCCATAAAATGTTCTACAGGAAACACGTCACTGTCAAGCACCTTTAAATGTGGTCTTTTGTtagtttttataatttatttatttggtatttacaatttatgttcaatttttttattttggtttatgcCCTACAGTCAGGGCTTTACATTAAGAGTTGCTCCTGCATTATGCCTAGAAACTGCAGCATGCAGATGATCATGATTTCATGATGCTGCCCTTTATGCTAAAAATAAAGTATGTCCAGTCTGGTGCATGAACTCACCCATAGGCATAAATCACGAATGATGCATTTCTGTTGAATGATGGGAATGATGATTTATAAgctatttttacacatttagcCTGTGAAGCACCTAAAATGGATATGTTAATAATTTGTACAGGCTTTGACTGATATCAATGTTTGCCTTTTATAGGACTGTATAGTTGCCACATTTAGGTCTGTCTCCATTTGTTTAGATCAAGTCTAAATTTAGTTTTGGTGTCATAGTCATGAGAGTCTCGTGCCACTGTTTTGTGTGGAACACAGTTAGAGCATCGAATACCTGTCGAAAGCTGTGCCCCAGTTTGCCCTGCGTTTTGCTTCATTGGTAGAGGGCTGATCACAGCAGGCCCAAACCAGGAGAGTCACCATCCAGTCACATGCTACATGTCTCTAACTGAAGCCATTAATGTTTGTAGTACATGTGTGTTCTAGATGTAACATTTATGTCAGAATCATCTTGGTATATGGCAATTTCTGAAAATGATGTCACTCAAATTATCGTATTTTTAAGAATATGTGGcctaaatgtttaatttcacaaCAAAGCTATTTACTGTGATCTGTCAGCAGTACAATatgaaaaagaacaattttaacaaattttaatGTAACATCACAATATTACAGTTGTTAGTATATCACAATGTCATGTCTcagataaatatacagtatacaaagtaGAATACAGTATTTAATGACTAAATATGTATGTTTATTACTGACACTGATTTTAGGAAAGCATGTTAAAAATAACTTCCATAAAAtgcaaaagtatttttaaaacagaacagaaatccATGTCTATGTTTAAATATCCAAAATGATCAATATCAGTTCCGTGTTTCTGCTTATGGAAATACCctaaaatgaataactgaaatGCAATGCTGGTGTTTACTCAGGCCTTTAAAGTCACAACTAAATGTGAAACTATTggaaaaagttgtttttttattttattttttttattatactacagaatttttttttcagcagctcTGTTCCAGTTGCAAAGTATATtacattctaatacattatcctttcagtagtaacagctcattcccaGGAACGTGTGTTGTAGACAGTtcaaaaagtgtgtaattgctgatatgctgaagtgtcagcactttgtaacagaggtaaagctgtaacttttttttccctgacacgggaaagtct
>XM_026944707.2
TTCTAGACCGTGATGAGAAAATCGAGTCAGCatttaatccagtttttttattttttatttttttattatttttagaggATCTATTTATGAAGCTCCAGGTGAAGGCCTGATGCTCGACTGTCTGTGTGCagcattaaacatttaatggGATCATTTTCTGCACCTTGGCTCATTCGCAGACATGGCAGACGCAGAACTGCAGACTTTCACGTCTATAATGGACGCGCTGGTGCGCATCAGTtCCAATATGAAGAGTATGGAGCGGGAGCTCCGCTGTCCGGTGTGTGAGGAGATGATGAAGCAGCCGATTGTGTTGCCATgcctgcacagtgtgtgtgtgttgtgtgcagcAGAGGTGTTGGTGCAGAGAGGTTACCCTCCTCCTGAACTCCCGCAGGAGCCCAACACACCCACCTCAAGCCCCAGCACCCGCTCACCACGACACGCTCGCCGACCACCACCCAAAACTGACCGCCTTGAGCGTGTGCTCAaaacagTATGTGGCACCTATCCGGGCCGGAGACGGAAAGACACAATTCCTCTGAATATGTTGTTTCCATGTCCCACTTGTTGCCGGGACGTAGAGCTGGGAGAGCGAGGCCTTGCCGACTGCCTACGCAATCTCACACTGGAGCGTATAATTGAGaggtacagacagacagtgagtcTAGGCAGCATGGCAGTGATGTGTCAGTTCTGCAAGCCCCCTCAAGCACTGGAGGCCACTAAAGGCTGCGCTGACTGCCGGGCCAATTTCTGTAACGAGTGTTTTAAGTTGTACCACCCCTGGGGTACCCCACGTGCCCAACATGAGCACATTCTGCCCACACACAGTTTCAGGCCCAAGctgctggtgtgtgttgagCACGAGCAGGAGCGGATGCAGTTCTACTGTCGTTCGTGTCAGCGTCTGTTGTGTGCACTCTGTAAGCTGCGTCGTGTTCACAACGGGCACAAGGTCATGCCCATAGCACAAGCCTACCAGACTTTAAAGGATAAAATTACTAAGCAGATGAACTACGTTCTGGCTCATCAAGAGAGGGTGCAGGCCCAAATCACTCAAGTGGAGAGTGCCATCGCTCAGACAGAGGTGAACAGTGCTGTTGCTAAAGAAAAgctgaatcagtgtgtgaacaATATGCGTGAAGAGCTGGCTGATCGGCAGTGTGCTCTGATCAAAACTCTGGAGGAGACTCGTGTTCAAAAATCGGAAGCTCTAAACACACAACTTTCAGAGAAACAGAGTCTGCTGGACAATGCAGGGCTCGTCATGTACACGCAGGAGCTACTGAAAGAAAACGATCAGCCATGCTTCGTGCAGGCCGCCAGAGTCACCCACAACCGGTTGGTTACAGCCATAGAGAACCTGCAGCGCTTCTCCCTCTCTGCAGATCCCTCATTTCGCCGTTTCCATGTGGACATCTCCAGAGAGCTCAAGCTACTCAGCAGCATGAATTTCATACAAGCTCCACTGGCTCCTGTAATCGACACCCAAAAGACTTTGGCCTATGATCAGCTGTACCTGTGCTGGCGCCTCCCACAGGACTCTGCTCCCGCCTGGCACTACTCCGTGGAGTATCAGAGGAAAGATGGCAGAGATGGACCTTTGTGGGGCGGGGTCAAATCTGAAGGCTCTGGAGGCCCCAACAGTCCATGGCAGCGCATGGATGAGGTGGGCGGGACTAGTGCAGTGATTGACAGACTGGAGATGGACAGCGTGTATGTGCTTAGAGTGAGAGGCTGCAACAAGGCGGGTTTTGGGGAGTACAGCGAGGAAGTGTATCTACACACACCGCCTGCACAAGtgcTGTCATTTTGTCTGGACTCTCGCTGGGGACTCCATGCTGAGCGTGTGGCACTGGGTAAGGGGCAGACGTATGCCCGTAGCGTGCCTGGTCTCACTCTCCTGCAGGCCGCCGACCGCGCCCTCACTTCCTTTcatctgacctctgacctcctGGTGGCGGATGTGTCAATCACCCAGGGTCGTCACTACTGGGCATGCTCAGTGGAGCCTGGTTCATACTTAGTCAAGgttggtGTTGGTCTAGAGACAAAGCTTCAAGAATGGTTTCACTTACCACAGGACATGGCAAGTCCCCGATATGATCCTGATAGTGGGCATGACAGTGGAGCAGAGGATGCCCAGGACTGTCCACCTCCATTCTGCTTCCTCACCATGGGCATGGGTAAGATTCTCATGCCCAAGTCAGGGGCATCTAATGGCATGTCTGGCCCTCTCACTGCCCCTCTGCCCCCACGCCTTGGCGTATGTCTGGACTTTGATAAAGGATGCATTACTTTCTACGATGCCCACTCGCTGCGAGTGCTGTGGGACGGGACTGTTGATTGCTCCGCCCCTGTTTGCCCAGCCTTTTGCTTCATTGGTGGAGGGGCACTGCAGCTGCAGGAGCTAATAGCCAATCACAGCACGGAGCAAGCCCCGCCCAGGAGAGTCACCATTCAATCACATGCAACACATCTGAGTAACTGAAGCCATAAAATGTTCTACAGGAAACACGTCACTGTCAAGCACCTTTAAATGTGGTCTTTTGTtagtttttataatttatttatttggtatttacaatttatgttcaatttttttattttggtttatgcCCTACAGTCAGGGCTTTACATTAAGAGTTGCTCCTGCATTATGCCTAGAAACTGCAGCATGCAGATGATCATGATTTCATGATGCTGCCCTTTATGCTAAAAATAAAGTATGTCCAGTCTGGTGCATGAACTCACCCATAGGCATAAATCACGAATGATGCATTTCTGTTGAATGATGGGAATGATGATTTATAAgctatttttacacatttagcCTGTGAAGCACCTAAAATGGATATGTTAATAATTTGTACAGGCTTTGACTGATATCAATGTTTGCCTTTTATAGGACTGTATAGTTGCCACATTTAGGTCTGTCTCCATTTGTTTAGATCAAGTCTAAATTTAGTTTTGGTGTCATAGTCATGAGAGTCTCGTGCCACTGTTTTGTGTGGAACACAGTTAGAGCATCGAATACCTGTCGAAAGCTGTGCCCCAGTTTGCCCTGCGTTTTGCTTCATTGGTAGAGGGCTGATCACAGCAGGCCCAAACCAGGAGAGTCACCATCCAGTCACATGCTACATGTCTCTAACTGAAGCCATTAATGTTTGTAGTACATGTGTGTTCTAGATGTAACATTTATGTCAGAATCATCTTGGTATATGGCAATTTCTGAAAATGATGTCACTCAAATTATCGTATTTTTAAGAATATGTGGcctaaatgtttaatttcacaaCAAAGCTATTTACTGTGATCTGTCAGCAGTACAATatgaaaaagaacaattttaacaaattttaatGTAACATCACAATATTACAGTTGTTAGTATATCACAATGTCATGTCTcagataaatatacagtatacaaagtaGAATACAGTATTTAATGACTAAATATGTATGTTTATTACTGACACTGATTTTAGGAAAGCATGTTAAAAATAACTTCCATAAAAtgcaaaagtatttttaaaacagaacagaaatccATGTCTATGTTTAAATATCCAAAATGATCAATATCAGTTCCGTGTTTCTGCTTATGGAAATACCctaaaatgaataactgaaatGCAATGCTGGTGTTTACTCAGGCCTTTAAAGTCACAACTAAATGTGAAACTATTggaaaaagttgtttttttattttattttttttattatactacagaatttttttttcagcagctcTGTTCCAGTTGCAAAGTATATtacattctaatacattatcctttcagtagtaacagctcattcccaGGAACGTGTGTTGTAGACAGTtcaaaaagtgtgtaattgctgatatgctgaagtgtcagcactttgtaacagaggtaaagctgtaacttttttttccctgacacgggaaagtct
>XM_026944708.2
CGCATGCTCTACAGTGAGTGAACTCATTTCATCATCGTGGACGCCTGTTTTAGACCCTTTTCTCTTTATACAGAGGCAGCATTGAGGCCACTTAAATATACAGCCATCAGAAATGGAAAGAGTGAAAAGGGACTGCGTGATGGACATGGCAGACGCAGAACTGCAGACTTTCACGTCTATAATGGACGCGCTGGTGCGCATCAGTtCCAATATGAAGAGTATGGAGCGGGAGCTCCGCTGTCCGGTGTGTGAGGAGATGATGAAGCAGCCGATTGTGTTGCCATgcctgcacagtgtgtgtgtgttgtgtgcagcAGAGGTGTTGGTGCAGAGAGGTTACCCTCCTCCTGAACTCCCGCAGGAGCCCAACACACCCACCTCAAGCCCCAGCACCCGCTCACCACGACACGCTCGCCGACCACCACCCAAAACTGACCGCCTTGAGCGTGTGCTCAaaacagTATGTGGCACCTATCCGGGCCGGAGACGGAAAGACACAATTCCTCTGAATATGTTGTTTCCATGTCCCACTTGTTGCCGGGACGTAGAGCTGGGAGAGCGAGGCCTTGCCGACTGCCTACGCAATCTCACACTGGAGCGTATAATTGAGaggtacagacagacagtgagtcTAGGCAGCATGGCAGTGATGTGTCAGTTCTGCAAGCCCCCTCAAGCACTGGAGGCCACTAAAGGCTGCGCTGACTGCCGGGCCAATTTCTGTAACGAGTGTTTTAAGTTGTACCACCCCTGGGGTACCCCACGTGCCCAACATGAGCACATTCTGCCCACACACAGTTTCAGGCCCAAGctgctggtgtgtgttgagCACGAGCAGGAGCGGATGCAGTTCTACTGTCGTTCGTGTCAGCGTCTGTTGTGTGCACTCTGTAAGCTGCGTCGTGTTCACAACGGGCACAAGGTCATGCCCATAGCACAAGCCTACCAGACTTTAAAGGATAAAATTACTAAGCAGATGAACTACGTTCTGGCTCATCAAGAGAGGGTGCAGGCCCAAATCACTCAAGTGGAGAGTGCCATCGCTCAGACAGAGGTGAACAGTGCTGTTGCTAAAGAAAAgctgaatcagtgtgtgaacaATATGCGTGAAGAGCTGGCTGATCGGCAGTGTGCTCTGATCAAAACTCTGGAGGAGACTCGTGTTCAAAAATCGGAAGCTCTAAACACACAACTTTCAGAGAAACAGAGTCTGCTGGACAATGCAGGGCTCGTCATGTACACGCAGGAGCTACTGAAAGAAAACGATCAGCCATGCTTCGTGCAGGCCGCCAGAGTCACCCACAACCGGTTGGTTACAGCCATAGAGAACCTGCAGCGCTTCTCCCTCTCTGCAGATCCCTCATTTCGCCGTTTCCATGTGGACATCTCCAGAGAGCTCAAGCTACTCAGCAGCATGAATTTCATACAAGCTCCACTGGCTCCTGTAATCGACACCCAAAAGACTTTGGCCTATGATCAGCTGTACCTGTGCTGGCGCCTCCCACAGGACTCTGCTCCCGCCTGGCACTACTCCGTGGAGTATCAGAGGAAAGATGGCAGAGATGGACCTTTGTGGGGCGGGGTCAAATCTGAAGGCTCTGGAGGCCCCAACAGTCCATGGCAGCGCATGGATGAGGTGGGCGGGACTAGTGCAGTGATTGACAGACTGGAGATGGACAGCGTGTATGTGCTTAGAGTGAGAGGCTGCAACAAGGCGGGTTTTGGGGAGTACAGCGAGGAAGTGTATCTACACACACCGCCTGCACAAGCTTTTCTTCAATTCctctatcttctctctctctctctctctctctctctcatgtacaTCATACTCTTCATCCACACTCTCAAGTTTACCATTTTCCATTTATCCTTATGTTTGAATTATCTTCCGTTTGCTTCTATCTGCTTTTcttctgctcctgctctgactTGTATTCCTGTTTGATCTGGAATATATCAGCTGCTTGACCTTCTCCAAATCCTAGTATATGTACAATGTTCCTACTTTCCTCTTTACCCTGCTCCTTATTTCCACTTCTCTTTAACCCGGCCAATTCTGTTCTTTTCCTTGTGAACTTCCTTTGTCCTTCTTTTACCTTTCTACTTGTTGTACCtacttttatttctgtcctCCTTATGTTTGCTGTCCCTGTTCTTTGTTTGTATACGATCCCCACCACTCCGTTCCCTACTACTCCCttgcttctctctttctctctctctttctctctttctttctgtctctcagtg
>XM_034307269.1
CGCATGCTCTACAGTGAGTGAACTCATTTCATCATCGTGGACGCCTGTTTTAGACCCTTTTCTCTTTATACAGAGGCAGCATTGAGGCCACTTAAATATACAGCCATCAGAAATGGAAAGAGTGAAAAGGGACTGCGTGATGGcattaaacatttaatggGATCATTTTCTGCACCTTGGCTCATTCGCAGACATGGCAGACGCAGAACTGCAGACTTTCACGTCTATAATGGACGCGCTGGTGCGCATCAGTtCCAATATGAAGAGTATGGAGCGGGAGCTCCGCTGTCCGGTGTGTGAGGAGATGATGAAGCAGCCGATTGTGTTGCCATgcctgcacagtgtgtgtgtgttgtgtgcagcAGAGGTGTTGGTGCAGAGAGGTTACCCTCCTCCTGAACTCCCGCAGGAGCCCAACACACCCACCTCAAGCCCCAGCACCCGCTCACCACGACACGCTCGCCGACCACCACCCAAAACTGACCGCCTTGAGCGTGTGCTCAaaacagTATGTGGCACCTATCCGGGCCGGAGACGGAAAGACACAATTCCTCTGAATATGTTGTTTCCATGTCCCACTTGTTGCCGGGACGTAGAGCTGGGAGAGCGAGGCCTTGCCGACTGCCTACGCAATCTCACACTGGAGCGTATAATTGAGaggtacagacagacagtgagtcTAGGCAGCATGGCAGTGATGTGTCAGTTCTGCAAGCCCCCTCAAGCACTGGAGGCCACTAAAGGCTGCGCTGACTGCCGGGCCAATTTCTGTAACGAGTGTTTTAAGTTGTACCACCCCTGGGGTACCCCACGTGCCCAACATGAGCACATTCTGCCCACACACAGTTTCAGGCCCAAGctgctggtgtgtgttgagCACGAGCAGGAGCGGATGCAGTTCTACTGTCGTTCGTGTCAGCGTCTGTTGTGTGCACTCTGTAAGCTGCGTCGTGTTCACAACGGGCACAAGGTCATGCCCATAGCACAAGCCTACCAGACTTTAAAGGATAAAATTACTAAGCAGATGAACTACGTTCTGGCTCATCAAGAGAGGGTGCAGGCCCAAATCACTCAAGTGGAGAGTGCCATCGCTCAGACAGAGGTGAACAGTGCTGTTGCTAAAGAAAAgctgaatcagtgtgtgaacaATATGCGTGAAGAGCTGGCTGATCGGCAGTGTGCTCTGATCAAAACTCTGGAGGAGACTCGTGTTCAAAAATCGGAAGCTCTAAACACACAACTTTCAGAGAAACAGAGTCTGCTGGACAATGCAGGGCTCGTCATGTACACGCAGGAGCTACTGAAAGAAAACGATCAGCCATGCTTCGTGCAGGCCGCCAGAGTCACCCACAACCGGTTGGTTACAGCCATAGAGAACCTGCAGCGCTTCTCCCTCTCTGCAGATCCCTCATTTCGCCGTTTCCATGTGGACATCTCCAGAGAGCTCAAGCTACTCAGCAGCATGAATTTCATACAAGCTCCACTGGCTCCTGTAATCGACACCCAAAAGACTTTGGCCTATGATCAGCTGTACCTGTGCTGGCGCCTCCCACAGGACTCTGCTCCCGCCTGGCACTACTCCGTGGAGTATCAGAGGAAAGATGGCAGAGATGGACCTTTGTGGGGCGGGGTCAAATCTGAAGGCTCTGGAGGCCCCAACAGTCCATGGCAGCGCATGGATGAGGTGGGCGGGACTAGTGCAGTGATTGACAGACTGGAGATGGACAGCGTGTATGTGCTTAGAGTGAGAGGCTGCAACAAGGCGGGTTTTGGGGAGTACAGCGAGGAAGTGTATCTACACACACCGCCTGCACAAGtgcTGTCATTTTGTCTGGACTCTCGCTGGGGACTCCATGCTGAGCGTGTGGCACTGGGTAAGGGGCAGACGTATGCCCGTAGCGTGCCTGGTCTCACTCTCCTGCAGGCCGCCGACCGCGCCCTCACTTCCTTTcatctgacctctgacctcctGGTGGCGGATGTGTCAATCACCCAGGGTCGTCACTACTGGGCATGCTCAGTGGAGCCTGGTTCATACTTAGTCAAGgttggtGTTGGTCTAGAGACAAAGCTTCAAGAATGGTTTCACTTACCACAGGACATGGCAAGTCCCCGATATGATCCTGATAGTGGGCATGACAGTGGAGCAGAGGATGCCCAGGACTGTCCACCTCCATTCTGCTTCCTCACCATGGGCATGGGTAAGATTCTCATGCCCAAGTCAGGGGCATCTAATGGCATGTCTGGCCCTCTCACTGCCCCTCTGCCCCCACGCCTTGGCGTATGTCTGGACTTTGATAAAGGATGCATTACTTTCTACGATGCCCACTCGCTGCGAGTGCTGTGGGACGGGACTGTTGATTGCTCCGCCCCTGTTTGCCCAGCCTTTTGCTTCATTGGTGGAGGGGCACTGCAGCTGCAGGAGCTAATAGCCAATCACAGCACGGAGCAAGCCCCGCCCAGGAGAGTCACCATTCAATCACATGCAACACATCTGAGTAACTGAAGCCATAAAATGTTCTACAGGAAACACGTCACTGTCAAGCACCTTTAAATGTGGTCTTTTGTtagtttttataatttatttatttggtatttacaatttatgttcaatttttttattttggtttatgcCCTACAGTCAGGGCTTTACATTAAGAGTTGCTCCTGCATTATGCCTAGAAACTGCAGCATGCAGATGATCATGATTTCATGATGCTGCCCTTTATGCTAAAAATAAAGTATGTCCAGTCTGGTGCATGAACTCACCCATAGGCATAAATCACGAATGATGCATTTCTGTTGAATGATGGGAATGATGATTTATAAgctatttttacacatttagcCTGTGAAGCACCTAAAATGGATATGTTAATAATTTGTACAGGCTTTGACTGATATCAATGTTTGCCTTTTATAGGACTGTATAGTTGCCACATTTAGGTCTGTCTCCATTTGTTTAGATCAAGTCTAAATTTAGTTTTGGTGTCATAGTCATGAGAGTCTCGTGCCACTGTTTTGTGTGGAACACAGTTAGAGCATCGAATACCTGTCGAAAGCTGTGCCCCAGTTTGCCCTGCGTTTTGCTTCATTGGTAGAGGGCTGATCACAGCAGGCCCAAACCAGGAGAGTCACCATCCAGTCACATGCTACATGTCTCTAACTGAAGCCATTAATGTTTGTAGTACATGTGTGTTCTAGATGTAACATTTATGTCAGAATCATCTTGGTATATGGCAATTTCTGAAAATGATGTCACTCAAATTATCGTATTTTTAAGAATATGTGGcctaaatgtttaatttcacaaCAAAGCTATTTACTGTGATCTGTCAGCAGTACAATatgaaaaagaacaattttaacaaattttaatGTAACATCACAATATTACAGTTGTTAGTATATCACAATGTCATGTCTcagataaatatacagtatacaaagtaGAATACAGTATTTAATGACTAAATATGTATGTTTATTACTGACACTGATTTTAGGAAAGCATGTTAAAAATAACTTCCATAAAAtgcaaaagtatttttaaaacagaacagaaatccATGTCTATGTTTAAATATCCAAAATGATCAATATCAGTTCCGTGTTTCTGCTTATGGAAATACCctaaaatgaataactgaaatGCAATGCTGGTGTTTACTCAGGCCTTTAAAGTCACAACTAAATGTGAAACTATTggaaaaagttgtttttttattttattttttttattatactacagaatttttttttcagcagctcTGTTCCAGTTGCAAAGTATATtacattctaatacattatcctttcagtagtaacagctcattcccaGGAACGTGTGTTGTAGACAGTtcaaaaagtgtgtaattgctgatatgctgaagtgtcagcactttgtaacagaggtaaagctgtaacttttttttccctgacacgggaaagtct

Function

symbol description
trim46a Predicted to enable zinc ion binding activity. Orthologous to human TRIM46 (tripartite motif containing 46).
trim46 Predicted to enable zinc ion binding activity. Predicted to be involved in negative regulation of axon extension; positive regulation of anterograde dense core granule transport; and regulation of cellular protein localization. Predicted to act upstream of or within several processes, including anterograde synaptic vesicle transport; generation of neurons; and protein localization to axon. Predicted to be located in main axon.

NR:

description
PREDICTED: tripartite motif-containing protein 46-like

GO: NA

KEGG:

id description
K12022 TRIM46; tripartite motif-containing protein 46

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026944706.2 False 3903 mRNA 0.46 13 25035405 25052795
XM_026944707.2 False 3939 mRNA 0.46 13 25035405 25052980
XM_026944708.2 False 2253 mRNA 0.50 11 25039182 25052795
XM_034307269.1 True 3951 mRNA 0.46 13 25035405 25052795

Neighbor

gene id symbol gene type direction distance location
si:dkey-246i14.3 LOC108269281 coding downstream 227476 24770276 ~ 24807929 (-)
shc1 shc1,LOC107714692,LOC107723450,LOC107677023 coding downstream 413188 24584953 ~ 24622217 (-)
lenep NA coding downstream 451581 24582501 ~ 24583824 (-)
LOC113542308 NA coding downstream 484917 24547264 ~ 24550488 (-)
s100t LOC108265897,LOC107594934,LOC107714712,LOC107673706,LOC108441953 coding downstream 500910 24532771 ~ 24534495 (-)
osgin2 osgin2 coding upstream 265306 25318286 ~ 25333708 (-)
LOC113545493 NA coding upstream 282621 25335601 ~ 25336609 (-)
rps19 rps19,LOC107657656,LOC100689943 coding upstream 468509 25521489 ~ 25527931 (-)
si:ch211-79k12.1 LOC108265448 coding upstream 660486 25713466 ~ 25722244 (-)
nrp1a nrp1,nrp1a,LOC106578544,LOC107565689 coding upstream 719612 25772592 ~ 25840943 (-)
G13834 NA non-coding downstream 316553 24713989 ~ 24718852 (-)
G13780 NA non-coding downstream 339388 24440646 ~ 24696017 (-)
G13819 NA non-coding downstream 415456 24614253 ~ 24619949 (-)
G13783 NA non-coding downstream 644001 24390511 ~ 24391404 (-)
G13782 NA non-coding downstream 647402 24387289 ~ 24388003 (-)
G14303 NA non-coding upstream 10488 25063468 ~ 25065486 (-)
G14315 NA non-coding upstream 46422 25099402 ~ 25101229 (-)
G14333 NA non-coding upstream 92861 25145841 ~ 25148263 (-)
G14435 LOC108266725,LOC108257096,LOC108266736,LOC108266743,LOC108280559,LOC108429918,LOC108429917 non-coding upstream 297439 25350419 ~ 25377539 (-)
G14439 LOC108265499,LOC108429949 non-coding upstream 335063 25388043 ~ 25390660 (-)
pbxip1b pbxip1 other downstream 457158 24561500 ~ 24578247 (-)
LOC113542209 LOC108265814 other downstream 474030 24552298 ~ 24561375 (-)
si:ch211-105c13.3 LOC108265907 other downstream 488564 24535860 ~ 24546841 (-)
si:dkey-92i15.4 LOC108265956,LOC108429986 other downstream 630875 24391530 ~ 24404530 (-)
LOC117596842 NA other downstream 795326 24236292 ~ 24240079 (-)
rps27.2 rps27,LOC107699547,LOC108429942,LOC107582081,LOC106605923,LOC107379597,LOC100304576,LOC100705775 other upstream 209060 25262040 ~ 25266771 (-)
bcam bcam other upstream 342507 25395487 ~ 25487425 (-)
G14258 NA other upstream 347776 25400756 ~ 25404306 (-)
cadm4 cadm4,LOC107714698,LOC107657657,LOC107699529 other upstream 494054 25547034 ~ 25705515 (-)
fxyd7 LOC108429921,LOC103043934 other upstream 705075 25758055 ~ 25764694 (-)

Expression


Co-expression Network