trnaq-cug_8


Basic Information

Item Value
gene id trnaq-cug_8
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 19699566 ~ 19699637 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnaq-cug_8
GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaq-cug_8 True 72 tRNA 0.50 1 19699566 19699637

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_3 NA coding downstream 15909 19683586 ~ 19683657 (-)
trnaq-cug_2 NA coding downstream 19100 19680395 ~ 19680466 (-)
trnaq-cug_1 NA coding downstream 22314 19677181 ~ 19677252 (-)
gon4l LOC108267623,LOC108436573,LOC107549236,LOC107597969 coding downstream 35523 19640774 ~ 19664043 (-)
pdia7 LOC108267688 coding downstream 63528 19629636 ~ 19636038 (-)
npr1b npr1b,LOC108273580,LOC103022666,LOC108436575,LOC107741766,LOC107689868,LOC107681586,LOC107717786,LOC106580330 coding upstream 48274 19747911 ~ 19788156 (-)
chtopb LOC108258844 coding upstream 98921 19798558 ~ 19803633 (-)
zgc:171704 LOC108267597 coding upstream 138450 19838087 ~ 19839645 (-)
trim33l NA coding upstream 140488 19840125 ~ 19859322 (-)
dcst2 dcst2 coding upstream 166742 19866379 ~ 19898936 (-)
G10746 NA non-coding downstream 7091 19692221 ~ 19692475 (-)
G10719 NA non-coding downstream 60280 19639054 ~ 19639286 (-)
G10716 NA non-coding downstream 61696 19637639 ~ 19637870 (-)
G10702 NA non-coding downstream 95806 19603418 ~ 19603760 (-)
G10630 NA non-coding downstream 232407 19466940 ~ 19467159 (-)
G10757 NA non-coding upstream 31039 19730676 ~ 19741287 (-)
G10762 NA non-coding upstream 44669 19744306 ~ 19744518 (-)
LOC113542661 NA non-coding upstream 134031 19833668 ~ 19833869 (-)
G10869 NA non-coding upstream 207462 19907099 ~ 19910920 (-)
G10956 NA non-coding upstream 314539 20014176 ~ 20014873 (-)
trnaq-cug_7 NA other downstream 3130 19696365 ~ 19696436 (-)
trnaq-cug_6 NA other downstream 6336 19693159 ~ 19693230 (-)
trnaq-cug_5 NA other downstream 9502 19689993 ~ 19690064 (-)
trnaq-cug_4 NA other downstream 12699 19686508 ~ 19686867 (-)
ccn4b wisp1,wisp1b,LOC107714595,LOC107724778,LOC107587903,LOC107552812 other downstream 152065 19542359 ~ 19547501 (-)
LOC117597712 NA other upstream 2974 19702611 ~ 19703160 (-)
trnaq-uug NA other upstream 46013 19745650 ~ 19745940 (-)
trnaq-cug_9 NA other upstream 46889 19746526 ~ 19746883 (-)
G10832 LOC108267614 other upstream 116840 19816477 ~ 19823683 (-)
rxrbb rxrbb,LOC108267229,LOC108413045,LOC107596638,LOC107581542 other upstream 1563940 21263577 ~ 21275341 (-)

Expression


Co-expression Network