p2rx1 (p2rx1)


Basic Information

Item Value
gene id p2rx1
gene name p2rx1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 7770898 ~ 7797351 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921527.2
gagagagcgagagagaggtaAGTCAGATCACAATGCCTCTGCACCTTCTCACTCaaactcactctcactctctctctgagagCTGAGAGAAGAGTTTATGACAGTAGAGTTTATGCTTCTGCCTTCATACATCCAGCAAAAATGAGGAACCTCATCAAAGAAGCTCTTTCAGACTTCTTCTTCGAGTATGAGACCCCTAGGCAGGTGCTGGTGAGAAACGCGAAAGTGGGTATTGCCTGCAGGATCCTCCAGTTGGGGGTGCTGGCTTACATTATCGGATGGGTGTTCATCTATGAGAAAGGCTACCAGATTGAAGACACAGCTATAAGCTCAGTTTTCACTAAGATGAAAGGAATAGCTTACACTGATATTAATGGAGCAGAGAGGCTTTGGGATGTAGCCGATTATGTTTTCCCTGATCAGGGCGTGTCGTCTTTTGTTGTGATGACAAATTTCATCATGACTGTGGGCCAGTCACAAGACAAATGCCCAGAGcTGCCGGACGGAACTAACAACTGCACTACGGATGCAGATTGCAAGAAGGGCCAATATAAACGTACAGGCAATGAGAGCTACGAGACAGACGCGACCATTCAGCCCTTTGAAGAAGAAGTAGGCAATGAGAGAGGGCGCATGACGGGGAAGTGCATTAACCAAACTACTTGTGAGATCCTAAGCTGGTGTCCTGTACAAGATGACCGGTTGATACCAAATCCTCCACTTTTGGCAGCAGCTGAGAATTTCACACTGTTCATCAAAAACTCCATCTCCTTCCCTGATTTTGGTGTAGTGAGAAGTAACCTAGTGGAAAAGGTGGATTCAAATTACCTCAAAACCTGCCTGTTTGACCCGGCTAAGCATCCACTGTGTCCCATCTTCAGACTCGGAGACATCGTCAGTCTCTCTGGCTTCAGGTTCTCAGAGATAGCTCAAGTGGGTGGATCAATAGGAATACTCATTGAATGGGAGTGTAATCTGGACCTTCGTATTGAAAAATGCATACCCAAGTACAGATTTGAAGGCCTCTACGGAAACAGTTCGCAAGCGTCAGTGGGCTACAATTTCAGAACGgcaaaatattacacagagGACAGAATCCAAAAGAGAACACTCATGAAGGTGTTTGGCCTATACATTGAGATCATCGTTCATGGACAGgCAAGAAAATTTGACATCATCCCAACACTGACAGCCATAGGGTCAGGAGTGGGAATCTTTGGAGTGGCCACcgtcgtgtgtgatgtggttCTTCTGTATTTCGTGCCAAAGAAGGATTTCTATAAAACCCTGAAATTCAAATCCACACCAGTGGAGGATGAGGAACCGGAATCGGTGACGATGGACCAAGCAAAGGAGGCAacacaagaaaaatgaaatgaggcATTTGAAAAAGCCTATCTGCACTGAAATTCAGAAAGAAAATACACATATACTGAGCTCACAGCACTGGACCAGGAGGAACGCCTGCTCTGCCTGAGAGACCTGCTAatgaactaacacacacaaaaacatcacTGCTCCTGCATTCAGCTCTGTGCAAAGAAACtaactgtaacatttaaataaatacaggatGTCAGAAATGTCATAATAACGAATAGGAATATGTTGAGCAAGTTTGTTGATCTGCATAGAGCTTAATGCGTAGAGCTTAAgggtgaacatgtagagcatatgTGGTAGTTGGTATACACCCTATATTGCACACTACACAATTTGTAGCCCTAATTTTTgtcagagaatttttttttaaccagaaagGTCATTCCTGTGTTATTGACTTCTTTTAGCTAACTATGcttcaaacaaacattttttttgcacatttcacacacactttcatgaaCAGCTTTACCCTGTTCAGGGTATCCGGTGAATCCGAAGCCTATCCTTGTAACACTGGGCGCAAGGGCTGAACCATATCAAACATTACAAATACAgtgtttatttcaaatccattttacTTACAGAGGATAAGCTGAAATGTTTGTATAAAGCACACACCTTACAGCTGATATTAACACAGGCAGAACACAGACTAAAACAGCTGAGTGGAATTAGAGTTTCAccacaccaaagttgattattttcttataaacacATGTCCgaatatgttttattcctcaacaatttttatttattaaagaatgacacatttttttcattta
>XM_026921529.2
gagagagcgagagagaggtaAGTCAGATCACAATGCCTCTGCACCTTCTCACTCaaactcactctcactctctctctgagagCTGAGAGAAGAGTTTATGACAGTAGAGTTTATGCTTCTGCCTTCATACATCCAGCAAAAATGAGGAACCTCATCAAAGAAGCTCTTTCAGACTTCTTCTTCGAGTATGAGACCCCTAGGCAGGTGCTGGTGAGAAACGCGAAAGTGGGTATTGCCTGCAGGATCCTCCAGTTGGGGGTGCTGGCTTACATTATCGGATGGGTGTTCATCTATGAGAAAGGCTACCAGATTGAAGACACAGCTATAAGCTCAGTTTTCACTAAGATGAAAGGAATAGCTTACACTGATATTAATGGAGCAGAGAGGCTTTGGGATGTAGCCGATTATGTTTTCCCTGATCAGGGCGTGTCGTCTTTTGTTGTGATGACAAATTTCATCATGACTGTGGGCCAGTCACAAGACAAATGCCCAGAGcTGCCGGACGGAACTAACAACTGCACTACGGATGCAGATTGCAAGAAGGGCCAATATAAACGTACAGGCAATGGGCGCATGACGGGGAAGTGCATTAACCAAACTACTTGTGAGATCCTAAGCTGGTGTCCTGTACAAGATGACCGGTTGATACCAAATCCTCCACTTTTGGCAGCAGCTGAGAATTTCACACTGTTCATCAAAAACTCCATCTCCTTCCCTGATTTTGGTGTAGTGAGAAGTAACCTAGTGGAAAAGGTGGATTCAAATTACCTCAAAACCTGCCTGTTTGACCCGGCTAAGCATCCACTGTGTCCCATCTTCAGACTCGGAGACATCGTCAGTCTCTCTGGCTTCAGGTTCTCAGAGATAGCTCAAGTGGGTGGATCAATAGGAATACTCATTGAATGGGAGTGTAATCTGGACCTTCGTATTGAAAAATGCATACCCAAGTACAGATTTGAAGGCCTCTACGGAAACAGTTCGCAAGCGTCAGTGGGCTACAATTTCAGAACGgcaaaatattacacagagGACAGAATCCAAAAGAGAACACTCATGAAGGTGTTTGGCCTATACATTGAGATCATCGTTCATGGACAGgCAAGAAAATTTGACATCATCCCAACACTGACAGCCATAGGGTCAGGAGTGGGAATCTTTGGAGTGGCCACcgtcgtgtgtgatgtggttCTTCTGTATTTCGTGCCAAAGAAGGATTTCTATAAAACCCTGAAATTCAAATCCACACCAGTGGAGGATGAGGAACCGGAATCGGTGACGATGGACCAAGCAAAGGAGGCAacacaagaaaaatgaaatgaggcATTTGAAAAAGCCTATCTGCACTGAAATTCAGAAAGAAAATACACATATACTGAGCTCACAGCACTGGACCAGGAGGAACGCCTGCTCTGCCTGAGAGACCTGCTAatgaactaacacacacaaaaacatcacTGCTCCTGCATTCAGCTCTGTGCAAAGAAACtaactgtaacatttaaataaatacaggatGTCAGAAATGTCATAATAACGAATAGGAATATGTTGAGCAAGTTTGTTGATCTGCATAGAGCTTAATGCGTAGAGCTTAAgggtgaacatgtagagcatatgTGGTAGTTGGTATACACCCTATATTGCACACTACACAATTTGTAGCCCTAATTTTTgtcagagaatttttttttaaccagaaagGTCATTCCTGTGTTATTGACTTCTTTTAGCTAACTATGcttcaaacaaacattttttttgcacatttcacacacactttcatgaaCAGCTTTACCCTGTTCAGGGTATCCGGTGAATCCGAAGCCTATCCTTGTAACACTGGGCGCAAGGGCTGAACCATATCAAACATTACAAATACAgtgtttatttcaaatccattttacTTACAGAGGATAAGCTGAAATGTTTGTATAAAGCACACACCTTACAGCTGATATTAACACAGGCAGAACACAGACTAAAACAGCTGAGTGGAATTAGAGTTTCAccacaccaaagttgattattttcttataaacacATGTCCgaatatgttttattcctcaacaatttttatttattaaagaatgacacatttttttcattta

Function

symbol description
p2rx1 Enables extracellularly ATP-gated cation channel activity. Predicted to act upstream of or within cation transmembrane transport and response to ATP. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Predicted to be integral component of nuclear inner membrane. Is expressed in hypothalamus and midbrain. Orthologous to human P2RX1 (purinergic receptor P2X 1).

NR:

description
PREDICTED: P2X purinoceptor 1 isoform X1

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0006812 cation transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004931 extracellularly ATP-gated cation channel activity molecular_function
GO:0001614 purinergic nucleotide receptor activity molecular_function

KEGG:

id description
K05215 P2RX1; P2X purinoceptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921527.2 True 2168 mRNA 0.42 14 7770898 7797351
XM_026921529.2 False 2108 mRNA 0.42 13 7770898 7797351

Neighbor

gene id symbol gene type direction distance location
LOC113531275 NA coding upstream 150566 7617979 ~ 7620332 (+)
sh3glb2b sh3glb2,sh3glb2b,LOC108429737,LOC107748508 coding upstream 167569 7565787 ~ 7603329 (+)
pip5kl1 pip5kl1 coding upstream 207218 7546460 ~ 7563680 (+)
fam102ab fam102a,fam102ab,LOC107681850,LOC107748511,LOC107664417 coding upstream 233928 7487816 ~ 7536970 (+)
pkn3 pkn3,LOC108429731,LOC107587363,LOC107597294,LOC107737478,LOC107681845 coding upstream 336878 7412105 ~ 7434020 (+)
LOC113531515 LOC108259923 coding downstream 302496 8099847 ~ 8104105 (+)
spns2 LOC108260118,LOC108429747,LOC107597455,LOC106602867 coding downstream 400128 8197479 ~ 8269630 (+)
ftr82 LOC108260233,LOC108429749,LOC103035912,LOC107664526,LOC107712362,LOC107597500 coding downstream 522586 8319937 ~ 8325759 (+)
ift22 ift22,LOC107597505,LOC107712360,LOC107664522,LOC107677430,LOC107722786 coding downstream 530825 8328176 ~ 8332329 (+)
c2cd2l c2cd2l coding downstream 622463 8419814 ~ 8465196 (+)
G382942 NA non-coding upstream 105210 7662867 ~ 7665688 (+)
G382932 NA non-coding upstream 120825 7649621 ~ 7650073 (+)
G382931 NA non-coding upstream 121375 7649309 ~ 7649523 (+)
G382929 NA non-coding upstream 124427 7646136 ~ 7646471 (+)
G382686 NA non-coding upstream 270313 7497766 ~ 7500585 (+)
G383067 NA non-coding downstream 107983 7905334 ~ 7909226 (+)
G383128 NA non-coding downstream 188261 7985612 ~ 7986368 (+)
G383143 NA non-coding downstream 225642 8022993 ~ 8107472 (+)
G383208 NA non-coding downstream 327292 8124643 ~ 8125748 (+)
G383181 NA non-coding downstream 364749 8162100 ~ 8163700 (+)
dpm2 dpm2,LOC107664400 other upstream 226784 7538358 ~ 7544114 (+)
LOC113531088 NA other upstream 509808 7260253 ~ 7261090 (+)
LOC113531592 rnf43 other upstream 712699 6962210 ~ 7058199 (+)
ubb ubb,LOC107567755,LOC107588961,LOC107387081 other upstream 1387213 6380662 ~ 6383685 (+)
G381893 NA other upstream 1528201 6223168 ~ 6242697 (+)
spns3 LOC108260438,LOC108260072 other downstream 345232 8142583 ~ 8161257 (+)
G383217 NA other downstream 385040 8182391 ~ 8213107 (+)
atf5a LOC108260316,LOC108429764,LOC107587340 other downstream 761475 8558826 ~ 8565257 (+)
gig2o LOC108260416 other downstream 792959 8590310 ~ 8592381 (+)
G383625 LOC108260351 other downstream 967551 8764902 ~ 8775134 (+)

Expression


Co-expression Network