Gene
RNA
| Item | Value |
|---|---|
| gene id | c1qbp |
| gene name | c1qbp |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 6658053 ~ 6662250 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| symbol | description |
|---|---|
| c1qbp | Predicted to be involved in mature ribosome assembly. Predicted to act upstream of or within adaptive immune response. Predicted to be located in mitochondrial matrix and plasma membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; midbrain; musculature system; and segmental plate. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 33. Orthologous to human C1QBP (complement C1q binding protein). |
| description |
|---|
| complement component 1 Q subcomponent-binding protein, mitochondrial |
| id | description |
|---|---|
| K15414 | C1QBP; complement component 1 Q subcomponent-binding protein, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026921929.2 | True | 1135 | mRNA | 0.51 | 6 | 6658053 | 6662250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113531298 | myo19,LOC107591502 | coding | upstream | 4151 | 6633970 ~ 6653902 (+) |
| tbx16l | LOC108260093 | coding | upstream | 112318 | 6537778 ~ 6545735 (+) |
| eral1 | eral1 | coding | upstream | 125159 | 6522164 ~ 6532894 (+) |
| LOC113531597 | LOC108260041 | coding | upstream | 206620 | 6436800 ~ 6451433 (+) |
| LOC113531512 | NA | coding | upstream | 226051 | 6415403 ~ 6432002 (+) |
| LOC113531024 | LOC108260100 | coding | downstream | 6682 | 6668932 ~ 6687976 (+) |
| srrm3 | srrm3 | coding | downstream | 28786 | 6691036 ~ 6773907 (+) |
| hspb1 | hspb1 | coding | downstream | 115742 | 6777992 ~ 6784388 (+) |
| LOC113531112 | tspoap1 | coding | downstream | 169434 | 6831684 ~ 6931919 (+) |
| mtmr4 | mtmr4 | coding | downstream | 417857 | 7080107 ~ 7149766 (+) |
| G382207 | NA | non-coding | upstream | 77443 | 6579113 ~ 6580610 (+) |
| G382205 | NA | non-coding | upstream | 81871 | 6575979 ~ 6576182 (+) |
| G382148 | NA | non-coding | upstream | 107249 | 6549802 ~ 6550804 (+) |
| G382146 | NA | non-coding | upstream | 120822 | 6537031 ~ 6537231 (+) |
| G382138 | NA | non-coding | upstream | 144883 | 6502015 ~ 6513170 (+) |
| G382257 | NA | non-coding | downstream | 4389 | 6666639 ~ 6668385 (+) |
| G382274 | NA | non-coding | downstream | 144929 | 6807179 ~ 6809541 (+) |
| G382292 | NA | non-coding | downstream | 148103 | 6810353 ~ 6810567 (+) |
| LOC117596241 | NA | non-coding | downstream | 148868 | 6811118 ~ 6815375 (+) |
| G382351 | supt4h1,LOC107654296,LOC107563417 | non-coding | downstream | 289469 | 6951719 ~ 6954928 (+) |
| ubb | ubb,LOC107567755,LOC107588961,LOC107387081 | other | upstream | 274368 | 6380662 ~ 6383685 (+) |
| G381893 | NA | other | upstream | 415356 | 6223168 ~ 6242697 (+) |
| G381835 | NA | other | upstream | 477140 | 6177804 ~ 6180913 (+) |
| zmp:0000001168 | sipa1,LOC108430456,LOC107742927 | other | upstream | 605697 | 5990022 ~ 6052356 (+) |
| G381829 | LOC108259779 | other | upstream | 681128 | 5975369 ~ 5976925 (+) |
| LOC113531592 | rnf43 | other | downstream | 299960 | 6962210 ~ 7058199 (+) |
| LOC113531088 | NA | other | downstream | 598003 | 7260253 ~ 7261090 (+) |
| dpm2 | dpm2,LOC107664400 | other | downstream | 876108 | 7538358 ~ 7544114 (+) |
| spns3 | LOC108260438,LOC108260072 | other | downstream | 1480333 | 8142583 ~ 8161257 (+) |
| G383217 | NA | other | downstream | 1520141 | 8182391 ~ 8213107 (+) |
