fkbp6 (fkbp6)


Basic Information

Item Value
gene id fkbp6
gene name fkbp6
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 15361358 ~ 15367247 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922033.2
ACTTGAAGTAGGGAGACAATTTAGTATCGTTTTATTCAGTGAATTCTTCACAGACTGAATTAATCCATAAATATATCCTTCCTGCAGTAACAAAGGACaaaataaaaccttataatGTAGAAAAGTAACCGTTTTTAAGATGGTTGCACGGATGTAAAGCTGATGGCGGTTATTCACCTCAGCGTGGCGCCTCTATATTTGTTTCAGTCAAGAAAAGCTAGACCTGCgttattagctacattaactTGAAAACTAGCCAAAGTTCATTGTACACTTCATGAAGAAATTCACTCGACTAAAAGCTCAAAATCATGACTACAAACGGTGTGTCTTCCAGACTGATTCAGTTTATTGACCCAGAGGAGCGCCATCGAGATGGAATAcagACGCCTTTCCAGCGTCTTGCTCAGCAAATGCAAGACGTTTTAGGAGATGGAGGAATTCTCAAGGAAGTGGTGCATGAGGGAGAAGGCCCGCTTGTACCAAGAGACGCTTCAGTCAGCATCCACTTTTCTGGATTCCTGGAGTATTCAGATCAGCCTTTTGAGTCGACTAGGAGCTTCAAATTTCCCAAAATGATGAAGCTAGGAAAAGACATGACTGTGTGGGGCCTCGACCTCGGCCTGCGGACCATGAGGAGAGGAGAGTTCTCTCGTTTTCTCATGCAGCCCAGCTACGCCTATGGAGAGATGGGCTGCCCTCCTCTCATCCCACCATGGGCCACGGTGCTGTACGAGGTGCAGGTCTTCGACTATCTTGACTCAGCCCAAGTGGATGAGTTCTTTGCACTTTTACCGGAAGAGCAGAATTTGGCTCCTCTGTCTACACTGCTGACTGTAGTCGACACAGAGCGAAGCTTTGGAAACCGCTGTTTCAACCAGAGCCGCTATGAAGACGCCAAACACAGATACAAGCAGGCCATGACGTTGCTAAGGAACCGTGAGCCACCGGATGAAGAAGAGAGGAGGCGTGTGGAGGAGGCGAGCCTGCCCTTCTTGCTCAATCTCTCCCTCACCTACCTCCGCCTGGAGAGACCTCGCAAAGCTCTGCAGTTTGGCCAGAGAGCTCTGGAAATCAGCCCTGGTAACACCAAAGCGCTGTTCCGGTGTGGTCAGGCATGCTTAGAGATGAATGACTATGAGAAGGCACAGGATTACCTCACCATGGCTCAGGCCAACAAGCCGTTTGACACAGACATCAACAACTTGCTAAGAAAGCTGGCACATTGTTACAAGGAAGACCTGGACAAGGAAAAACACATGTGCTCCAAAATGTTTTCTGCTCTCAAATCTGAGAAGTGAACAtgtttccaaGTCAGTGGgattagaggaataaaatcaACTACTAAGGAACTTGGAGGTACGATTGAACTTCACACCATGTGAAAGTGTAATGGAAAGTTCACTTGTGTACAACCCAGTGTAGATTAATACACAGCTAACAGTTTTGTTAATTTCTTAGTTATTGTTGCAGTGTTAGTTATCGATTAAGCAATTTGATAAACTGTTCATGTTTGAAAGTGTtttcttctattattattattgtgttatatACAAATGATTGAGTCATTGATTTCCTGCATATTTTGGAGTTTTGTGCTTGTAAATTAGAATATCGCAATAGATTAGGTTGAGTTTTTTCATGTCAAAATCTTtcaatacatattttttttctgtcta
>XR_004577401.1
AACTTGAAGTAGGGAGACAATTTAGTATCGTTTTATTCAGTGAATTCTTCACAGACTGAATTAATCCATAAATATATCCTTCCTGCAGTAACAAAGGACaaaataaaaccttataatGTAGAAAAGTAACCGTTTTTAAGATGGTTGCACGGATGTAAAGCTGATGGCGGTTATTCACCTCAGCGTGGCGCCTCTATATTTGTTTCAGTCAAGAAAAGCTAGACCTGCgttattagctacattaactTGAAAACTAGCCAAAGTTCATTGTACACTTCATGAAGAAATTCACTCGACTAAAAGCTCAAAATCATGACTACAAACGGTGTGTCTTCCAGACTGATTCAGTTTATTGACCCAGAGGAGCGCCATCGAGATGGAATAcagACGCCTTTCCAGCGTCTTGCTCAGCAAATGCAAGACGTTTTAGGAGATGGAGGAATTCTCAAGGAAGTGGTGCATGAGGGAGAAGGCCCGCTTGTACCAAGAGACGCTTCAGTCAGCATCCACTTTTCTGGATTCCTGGAGTATTCAGATCAGCCTTTTGAGTCGACTAGGAGCTTCAAATTTCCCAAAATGATGAAGCTAGGAAAAGACATGACTGTGTGGGGCCTCGACCTCGGCCTGCGGACCATGAGGAGAGGAGAGTTCTCTCGTTTTCTCATGCAGCCCAGCTACGCCTATGGAGAGATGGGCTGCCCTCCTCTCATCCCACCATGGGCCACGGTGCTGTACGAGGTGCAGGTCTTCGACTATCTTGACTCAGCCCAAGTGGATGAGTTCTTTGCACTTTTACCGGAAGAGCAGAATTTGGCTCCTCTGTCTACACTGCTGACTGTAGTCGACACAGAGCGAAGCTTTGGAAACCGCTGTTTCAACCAGAGCCGCTATGAAGACGCCAAACACAGATACAAGCAGGCCATGACGTTGCTAAGGAACCGTGAGCCACCGGATGAAGAAGAGAGGAGGCGTGTGGAGGAGGCGAGCCTGCCCTTCTTGCTCAATCTCTCCCTCACCTACCTCCGCCTGGAGAGACCTCGCAAAGCTCTGCAGTTTGGCCAGAGAGCTCTGGAAATCAGCCCTGGTAACACCAAAGCGCTGTTCCGGTGTGGTCAGGCATGCTTAGAGATGAATGACTATGAGAAGGCACAGGATTACCTCACCATGGCTCAGGCCAACAAGCCGTTTGACACAGACATCAACAACTTGCTAAGAAAGCTGGCACATTGTTACAAGGAAGACCTGGACAAGGAAAAACACATGTGCTCCAAAATGTTTTCTGCTCTCAAATCTGAGAAGTGAACAtgtttccaaGTCAGTGGgattagaggaataaaatcaACTACTAAGGAACTTGGAGGTCTTGTGCCCCGTTTACTCGCCATTTGACAGCAAGTAATCtctgagtgtaaaaaaaatatacgaCTCTGGGCGTTCACTGGTACAGTGCATTATCACATCATAGAGCCAATTATCATCGCTGTTTTAGTGGCTATAAACCATTAGTAATTGCTTCAAGCTGAGCCACTGCTTGTTCAGTGCACCCTATAGAGTTATGAATGGTTTTCTAGAGGAAGGATGGTCTTGAGTAAATTCTGAGTATACAAAATTTACATTATGACAACTGTCCATGTggtaaatacactatatggccaaaaatttgtggacccctgaccattacactcatatgtgtttATTGAACATCGCATTCAAGATTTAATCCctgtttgctgttatattaacctccactcttctaggaagactttccactagattt

Function

symbol description
fkbp6 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to act upstream of or within gene silencing by RNA; meiotic cell cycle; and piRNA metabolic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome. Orthologous to human FKBP6 (FKBP prolyl isomerase family member 6 (inactive)).

NR:

description
inactive peptidyl-prolyl cis-trans isomerase FKBP6-like isoform X1

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09572 FKBP6; FK506-binding protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922033.2 False 1679 mRNA 0.44 9 15361359 15366736
XR_004577401.1 True 1777 misc_RNA 0.45 10 15361358 15367247

Neighbor

gene id symbol gene type direction distance location
hspb2 hspb2,LOC107691741,LOC107721646,LOC107603202 coding upstream 7635 15350540 ~ 15353723 (+)
c27h11orf1 c28h11orf1 coding upstream 14449 15343638 ~ 15346909 (+)
mia mia,LOC107691742 coding upstream 17788 15341706 ~ 15343570 (+)
crfb12 NA coding upstream 30335 15321665 ~ 15331023 (+)
si:dkey-71l1.1 tomm40l,si:dkey-71l1.1,LOC108259972,LOC103030645,LOC107691796,LOC107745123,LOC107603199,LOC107663776,LOC107574698 coding upstream 40001 15314107 ~ 15321357 (+)
fzd9a fzd9,LOC108260460,LOC108428763,LOC106567714,LOC105023973,LOC106612580 coding downstream 9401 15376648 ~ 15379250 (+)
mrm1 mrm1 coding downstream 38592 15405839 ~ 15410281 (+)
lhx1b lhx1,lhx1b,LOC107728209 coding downstream 76266 15443513 ~ 15469589 (+)
aatf aatf,LOC107695156,LOC107730321,LOC107600606 coding downstream 103195 15470442 ~ 15485758 (+)
LOC117596224 NA coding downstream 382123 15749370 ~ 15754438 (+)
G387388 NA non-coding upstream 91449 15266107 ~ 15269909 (+)
G387386 btg4,LOC107745130,LOC107556417 non-coding upstream 143248 15215977 ~ 15218110 (+)
G387383 NA non-coding upstream 153461 15205754 ~ 15207897 (+)
LOC113531625 NA non-coding upstream 156476 15182313 ~ 15204882 (+)
G387208 NA non-coding upstream 425316 14934704 ~ 14936042 (+)
G387504 NA non-coding downstream 3315 15370562 ~ 15370773 (+)
G387513 NA non-coding downstream 23372 15390619 ~ 15390835 (+)
LOC117596225 NA non-coding downstream 356598 15723845 ~ 15731883 (+)
G387659 NA non-coding downstream 403797 15771044 ~ 15771244 (+)
G387675 NA non-coding downstream 430347 15797594 ~ 15803923 (+)
zgc:193711 LOC108260397 other upstream 304 15354360 ~ 15361054 (+)
sik2a sik2 other upstream 87279 15245005 ~ 15274079 (+)
c27h11orf88 c28h11orf88 other upstream 127666 15163384 ~ 15233692 (+)
G386325 NA other upstream 1533210 13825850 ~ 13828148 (+)
G386294 NA other upstream 1537303 13821788 ~ 13824055 (+)
LOC113531170 nyap1,LOC108259934,LOC101885998,LOC107596102 other downstream 440302 15807549 ~ 15859905 (+)
LOC113531248 NA other downstream 667576 16034823 ~ 16038605 (+)
si:ch211-284e13.4 LOC108260367,LOC108427482 other downstream 709842 16077089 ~ 16096184 (+)
lrch2 lrch2,LOC107746375,LOC107700248 other downstream 775695 16142942 ~ 16210315 (+)
trnam-cau_49 NA other downstream 781113 16148360 ~ 16148432 (+)

Expression


Co-expression Network