LOC113531687


Basic Information

Item Value
gene id LOC113531687
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 9369261 ~ 9369328 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003403289.1
TGCAaatgatgtgaagaaaatctgaTTAGTGTATGTTGACACTTTTTCCCACCAAGATCACTGATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003403289.1 True 68 ncRNA 0.37 1 9369261 9369328

Neighbor

gene id symbol gene type direction distance location
LOC113531686 NA coding upstream 358 9368831 ~ 9368903 (+)
LOC113531685 NA coding upstream 697 9368489 ~ 9368564 (+)
c27h9orf78 c28h9orf78,cunh9orf78,zgc:103692,LOC107587408,LOC107726294,LOC103362310,LOC107710755 coding upstream 10373 9351540 ~ 9358888 (+)
tlcd3a LOC108260074,LOC108431021,LOC106929083,LOC103476334 coding upstream 85483 9255884 ~ 9283778 (+)
usp2b usp2b,usp2,LOC108260071,LOC108431020,LOC107665042,LOC107740817,LOC107731051 coding upstream 136619 9186660 ~ 9232642 (+)
LOC113531672 NA coding downstream 1732 9371060 ~ 9371137 (+)
LOC113531683 NA coding downstream 2131 9371459 ~ 9371530 (+)
surf6 surf6 coding downstream 11258 9380586 ~ 9387508 (+)
LOC113531633 LOC108260322 coding downstream 20114 9389442 ~ 9397886 (+)
LOC113531568 LOC108260321 coding downstream 32727 9402055 ~ 9413856 (+)
G383965 NA non-coding upstream 26616 9342428 ~ 9342645 (+)
G383961 NA non-coding upstream 30115 9338933 ~ 9339146 (+)
G383960 usp20 non-coding upstream 31355 9336910 ~ 9337906 (+)
G383959 NA non-coding upstream 33640 9335258 ~ 9335621 (+)
G383958 NA non-coding upstream 35031 9333677 ~ 9334230 (+)
G383971 NA non-coding downstream 2838 9372166 ~ 9454589 (+)
LOC117596253 NA non-coding downstream 84717 9454045 ~ 9456252 (+)
G384106 NA non-coding downstream 117134 9486462 ~ 9486667 (+)
G384125 NA non-coding downstream 156983 9526311 ~ 9526518 (+)
G384134 NA non-coding downstream 191807 9561135 ~ 9561374 (+)
G383625 LOC108260351 other upstream 594127 8764902 ~ 8775134 (+)
gig2o LOC108260416 other upstream 776880 8590310 ~ 8592381 (+)
atf5a LOC108260316,LOC108429764,LOC107587340 other upstream 804004 8558826 ~ 8565257 (+)
G383217 NA other upstream 1156154 8182391 ~ 8213107 (+)
spns3 LOC108260438,LOC108260072 other upstream 1208004 8142583 ~ 8161257 (+)
G384178 ier5l,LOC108228905 other downstream 396412 9765740 ~ 9768036 (+)
G384593 NA other downstream 1008885 10378213 ~ 10379665 (+)
ajm1 c28h9orf172 other downstream 1928646 11297974 ~ 11326055 (+)
fcho2 fcho2,LOC107700925,LOC107655928 other downstream 2348690 11718018 ~ 11835044 (+)
zgc:63972 LOC108260458 other downstream 3421573 12790901 ~ 12800917 (+)

Expression


Co-expression Network